| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920849
Identifier: 117920849
GI number: 117920849
Start: 2884077
End: 2885000
Strand: Direct
Name: 117920849
Synonym: Shewana3_2406
Alternate gene names: NA
Gene position: 2884077-2885000 (Clockwise)
Preceding gene: 117920848
Following gene: 117920851
Centisome position: 58.0
GC content: 46.1
Gene sequence:
>924_bases ATGGCACAAAAGTCTGATGTTATCGCTGGATATAATAAGAAGAATACTGGAGTAACGTTGATTTCTACTCGTCTAACACC CCTATTGATCGCTCTACTCGGCAGCAGTCCTGTGCTGGCGGGGGAATTGAGCCTTGAGTTAGGGGGATTTTATTCACAGT CTGATACCAATATGGAGGTGACGAACCCGACCACGGGTAATAACTTCACCTTAGACTATGAATCCGATCTGCAACTGGCC GAGAATGAGTTTTTACCCTTTGTTGAAGTCAATTATCACTTTAACGAGCGGCATAATATTTACCTCGACTGGAAACAACT TCACCGCAGCGCCGAAACGCAAGCCTTATCCAAACCCTTTCAAATCGAAATAAACGACACCATTTACGACATTAAGGCTG GGGGCAAGCTCAACTCCACCTTAAATATTGATATTCTGCGGCTCGGTTACGGTTACGATGCCATCCAAGGCAGCGACTAC GATGTGGGCATTTCCCTTGGTTTGCACACTATGTTTATCAAGACCGGCTTTGAAGGCGTTATCGGTGTCTGCCATGCCTC TGAGCTGCTGAACAATGTTTGTGGTAGCCAAGCCATCCCCCGCATCGTCGATGAAAATGTCACTGCACCTTTGCCTGATT TTGGCGTCTATGCCAACTATGAATTTATCCCCGGCTGGAAGCTGACGACCCATGCCCAGTATTTCTACATCAAACTCAAT GATGTAAAAGGCGAACTGGTAGATGTTAAACTCGGCATCGATGCCAATATCACCGATAACTGGCGCATGAGCGTGGCCTA CAACTACTACAAGGTCGATGTGGATATCGCCCAAAAATCACCGAATAAAGATACTCAAATCGCCGACTACAACATTTACT ACAGTTTTATCGGCCCGATGCTTTCGGTCAGCTATACCTTCTAA
Upstream 100 bases:
>100_bases AGCAGTACTACTTTTGTTTTAAATCACAAAACACGGCAATTTATAAAACATTTTATTCACATTTTGAAATTTGCTGTTAC ACTCCAAATGTCCATGGCTT
Downstream 100 bases:
>100_bases TAGATTGATAAGCATAAAAAAGGACGCCTAGGCGTCCTTTTTTGCTTTTGTTTAATATGATTACTTTTTCCGACCGTCTT GCTCACGCTTGGTCTTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MAQKSDVIAGYNKKNTGVTLISTRLTPLLIALLGSSPVLAGELSLELGGFYSQSDTNMEVTNPTTGNNFTLDYESDLQLA ENEFLPFVEVNYHFNERHNIYLDWKQLHRSAETQALSKPFQIEINDTIYDIKAGGKLNSTLNIDILRLGYGYDAIQGSDY DVGISLGLHTMFIKTGFEGVIGVCHASELLNNVCGSQAIPRIVDENVTAPLPDFGVYANYEFIPGWKLTTHAQYFYIKLN DVKGELVDVKLGIDANITDNWRMSVAYNYYKVDVDIAQKSPNKDTQIADYNIYYSFIGPMLSVSYTF
Sequences:
>Translated_307_residues MAQKSDVIAGYNKKNTGVTLISTRLTPLLIALLGSSPVLAGELSLELGGFYSQSDTNMEVTNPTTGNNFTLDYESDLQLA ENEFLPFVEVNYHFNERHNIYLDWKQLHRSAETQALSKPFQIEINDTIYDIKAGGKLNSTLNIDILRLGYGYDAIQGSDY DVGISLGLHTMFIKTGFEGVIGVCHASELLNNVCGSQAIPRIVDENVTAPLPDFGVYANYEFIPGWKLTTHAQYFYIKLN DVKGELVDVKLGIDANITDNWRMSVAYNYYKVDVDIAQKSPNKDTQIADYNIYYSFIGPMLSVSYTF >Mature_306_residues AQKSDVIAGYNKKNTGVTLISTRLTPLLIALLGSSPVLAGELSLELGGFYSQSDTNMEVTNPTTGNNFTLDYESDLQLAE NEFLPFVEVNYHFNERHNIYLDWKQLHRSAETQALSKPFQIEINDTIYDIKAGGKLNSTLNIDILRLGYGYDAIQGSDYD VGISLGLHTMFIKTGFEGVIGVCHASELLNNVCGSQAIPRIVDENVTAPLPDFGVYANYEFIPGWKLTTHAQYFYIKLND VKGELVDVKLGIDANITDNWRMSVAYNYYKVDVDIAQKSPNKDTQIADYNIYYSFIGPMLSVSYTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34316; Mature: 34185
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKSDVIAGYNKKNTGVTLISTRLTPLLIALLGSSPVLAGELSLELGGFYSQSDTNMEV CCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHHCCCCEEEEEEEEEECCEECCCCCCEEE TNPTTGNNFTLDYESDLQLAENEFLPFVEVNYHFNERHNIYLDWKQLHRSAETQALSKPF ECCCCCCEEEEEECCCCHHHHCCCCCEEEEEEEECCCCEEEEEHHHHCCHHHHHHHCCCE QIEINDTIYDIKAGGKLNSTLNIDILRLGYGYDAIQGSDYDVGISLGLHTMFIKTGFEGV EEEECCEEEEEECCCEECCEEEEEEEEEECCCCCCCCCCEEEEEEECEEEEEEECCCCCE IGVCHASELLNNVCGSQAIPRIVDENVTAPLPDFGVYANYEFIPGWKLTTHAQYFYIKLN EEHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEECEEECCCCEEEECEEEEEEEEE DVKGELVDVKLGIDANITDNWRMSVAYNYYKVDVDIAQKSPNKDTQIADYNIYYSFIGPM CCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCC LSVSYTF EEEEECC >Mature Secondary Structure AQKSDVIAGYNKKNTGVTLISTRLTPLLIALLGSSPVLAGELSLELGGFYSQSDTNMEV CCCCCEEECCCCCCCCEEEEEHHHHHHHHHHHCCCCEEEEEEEEEECCEECCCCCCEEE TNPTTGNNFTLDYESDLQLAENEFLPFVEVNYHFNERHNIYLDWKQLHRSAETQALSKPF ECCCCCCEEEEEECCCCHHHHCCCCCEEEEEEEECCCCEEEEEHHHHCCHHHHHHHCCCE QIEINDTIYDIKAGGKLNSTLNIDILRLGYGYDAIQGSDYDVGISLGLHTMFIKTGFEGV EEEECCEEEEEECCCEECCEEEEEEEEEECCCCCCCCCCEEEEEEECEEEEEEECCCCCE IGVCHASELLNNVCGSQAIPRIVDENVTAPLPDFGVYANYEFIPGWKLTTHAQYFYIKLN EEHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEECEEECCCCEEEECEEEEEEEEE DVKGELVDVKLGIDANITDNWRMSVAYNYYKVDVDIAQKSPNKDTQIADYNIYYSFIGPM CCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCC LSVSYTF EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA