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The map label for this gene is yccY [C]

Identifier: 117920842

GI number: 117920842

Start: 2878032

End: 2878547

Strand: Reverse

Name: yccY [C]

Synonym: Shewana3_2399

Alternate gene names: 117920842

Gene position: 2878547-2878032 (Counterclockwise)

Preceding gene: 117920843

Following gene: 117920841

Centisome position: 57.89

GC content: 47.48

Gene sequence:

>516_bases
TTGTTAGAAGATAGAGTGTTAGCAAAAGCACAGTCAGTACGACGTATTTTAATGGTCTGCATGGGTAATATTTGTCGCTC
GCCCACCGCCGAGGCCGTTTGCCGCGCTAAAATTCGCGAGCGCCGTCTTAATATCGAAGTCGATTCGGCGGGCACTATTG
ATTACCACCAAGGGGATCATCCCGACAGTCGCTCTATGGCTGCAGGTAAAAAACGCGGCTTGAGTTTCGACGGCATGCGA
GCAAGACAAGTGATTGATGCCGATTTTGAGCATTTCGATCTTATTTTAGCGGCAGATAATAGCAATCTCGCGGATTTGCG
CCGCCGTTGTCCACCCGAATATCAATACAAATTAAAGTTGATGCTGTCCTATAGTGATTGCGACACGGATGAGGTTCCCG
ATCCCTATTACGGTGGCACGCAAGGATTCGAATTAGTCCTCGATCTACTCGAACAGAGTATGGACGCTTTATTAGACCAG
TTAGCCGGAAAAACGGATGGGAAGAATAACGATTAA

Upstream 100 bases:

>100_bases
ATGAGCAGTATGGTTACCATTTTGAAGTCAAAAAATGTATTTCTCCCGCCTTTGGTCAGATGGCATCAACACCTAAGTAG
CAACACGAGAGGATGTTAAG

Downstream 100 bases:

>100_bases
GTGCAACTTGAATAAAGCGTAATTGCCCCAAATCTATATAAGTTTGTCGTCAGGTGTGCAGGATGAATTGTCATTGTTTC
CCCTGTGACACGCCATAAAC

Product: protein tyrosine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MLEDRVLAKAQSVRRILMVCMGNICRSPTAEAVCRAKIRERRLNIEVDSAGTIDYHQGDHPDSRSMAAGKKRGLSFDGMR
ARQVIDADFEHFDLILAADNSNLADLRRRCPPEYQYKLKLMLSYSDCDTDEVPDPYYGGTQGFELVLDLLEQSMDALLDQ
LAGKTDGKNND

Sequences:

>Translated_171_residues
MLEDRVLAKAQSVRRILMVCMGNICRSPTAEAVCRAKIRERRLNIEVDSAGTIDYHQGDHPDSRSMAAGKKRGLSFDGMR
ARQVIDADFEHFDLILAADNSNLADLRRRCPPEYQYKLKLMLSYSDCDTDEVPDPYYGGTQGFELVLDLLEQSMDALLDQ
LAGKTDGKNND
>Mature_171_residues
MLEDRVLAKAQSVRRILMVCMGNICRSPTAEAVCRAKIRERRLNIEVDSAGTIDYHQGDHPDSRSMAAGKKRGLSFDGMR
ARQVIDADFEHFDLILAADNSNLADLRRRCPPEYQYKLKLMLSYSDCDTDEVPDPYYGGTQGFELVLDLLEQSMDALLDQ
LAGKTDGKNND

Specific function: Unknown

COG id: COG0394

COG function: function code T; Protein-tyrosine-phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]

Homologues:

Organism=Homo sapiens, GI4757714, Length=154, Percent_Identity=38.3116883116883, Blast_Score=98, Evalue=3e-21,
Organism=Homo sapiens, GI6005988, Length=154, Percent_Identity=35.7142857142857, Blast_Score=95, Evalue=3e-20,
Organism=Escherichia coli, GI87081812, Length=148, Percent_Identity=31.0810810810811, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI1788375, Length=139, Percent_Identity=33.8129496402878, Blast_Score=67, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6325330, Length=139, Percent_Identity=32.3741007194245, Blast_Score=88, Evalue=8e-19,
Organism=Drosophila melanogaster, GI78706770, Length=134, Percent_Identity=43.2835820895522, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI78706772, Length=134, Percent_Identity=43.2835820895522, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI78706766, Length=135, Percent_Identity=36.2962962962963, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI78706768, Length=135, Percent_Identity=36.2962962962963, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI78706764, Length=127, Percent_Identity=35.4330708661417, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI78711846, Length=135, Percent_Identity=37.7777777777778, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000106
- InterPro:   IPR017867 [H]

Pfam domain/function: PF01451 LMWPc [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 19233; Mature: 19233

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEDRVLAKAQSVRRILMVCMGNICRSPTAEAVCRAKIRERRLNIEVDSAGTIDYHQGDH
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCC
PDSRSMAAGKKRGLSFDGMRARQVIDADFEHFDLILAADNSNLADLRRRCPPEYQYKLKL
CCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEEE
MLSYSDCDTDEVPDPYYGGTQGFELVLDLLEQSMDALLDQLAGKTDGKNND
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLEDRVLAKAQSVRRILMVCMGNICRSPTAEAVCRAKIRERRLNIEVDSAGTIDYHQGDH
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCC
PDSRSMAAGKKRGLSFDGMRARQVIDADFEHFDLILAADNSNLADLRRRCPPEYQYKLKL
CCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEEE
MLSYSDCDTDEVPDPYYGGTQGFELVLDLLEQSMDALLDQLAGKTDGKNND
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]