| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920841
Identifier: 117920841
GI number: 117920841
Start: 2876817
End: 2877422
Strand: Reverse
Name: 117920841
Synonym: Shewana3_2398
Alternate gene names: NA
Gene position: 2877422-2876817 (Counterclockwise)
Preceding gene: 117920842
Following gene: 117920840
Centisome position: 57.87
GC content: 39.11
Gene sequence:
>606_bases GTGTCATCCGATGATTGGTACAGGAATAAAAATTGGAATGCTTCTATCGAAGAACATTTCTATTCGAAGTTGAAGCGAGC AAGAACGCAGCGAGATCAATATTTAGTAATCCAAGCTCTCACTTTGGCTGATAATGATCCAGAAGTATCGCTTCGTTTGG TTAATGAATACTTCGAATCAAGAAAGGATAAATTTGATGATGTTCGTGCTTTATTGGCAAAAGCAACCGCATTTAAAGCG CTAAACGATTTGGATGGATGTATTTCTGCTTTCAAAGAAGTGCTTGAGAGGGAAAGAGAATTTCCAAACCACCAAACCGG GGTGTACCTTGATTATCCATATTTGGTAGCAACTCGAAAAATTGAAAACGAGTACGCCAATGCTCTTGATGTGCTTAATG AGCATGTTGATAGACTCACGTTTCCTCTTGATCATTATAAGTGGCACGCATCTAAAGCATTAATCGGTAGCGATGGCTCA GAGGCAAAAAAGGCTCTCGAAGCTGCTAAAGTTAAAAAATCTGGATTTCGATTTCATCAAGATGTTGGCTTAGTCGGTAA GGAACATGAAAAGACAATTAAACATCTGTGCAAGATCTGCACGTAA
Upstream 100 bases:
>100_bases AGTTCTTTGCATACAGATAGTTAACTGTGCGCGTTTTCACTGGTCCAACGAGGTAAACGCGCATGCGCACTAATAAAATG TTACGTGCTAAGGATTTATT
Downstream 100 bases:
>100_bases CAAAGCCAGCCAGAGGGACAGCCAAACCGCTGCGCGCTTTGTCTGCCCCTGCTGGCGGCGTTATGTTCCCTAAATGGAGA GTTTGTGCAGAGTTTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSSDDWYRNKNWNASIEEHFYSKLKRARTQRDQYLVIQALTLADNDPEVSLRLVNEYFESRKDKFDDVRALLAKATAFKA LNDLDGCISAFKEVLEREREFPNHQTGVYLDYPYLVATRKIENEYANALDVLNEHVDRLTFPLDHYKWHASKALIGSDGS EAKKALEAAKVKKSGFRFHQDVGLVGKEHEKTIKHLCKICT
Sequences:
>Translated_201_residues MSSDDWYRNKNWNASIEEHFYSKLKRARTQRDQYLVIQALTLADNDPEVSLRLVNEYFESRKDKFDDVRALLAKATAFKA LNDLDGCISAFKEVLEREREFPNHQTGVYLDYPYLVATRKIENEYANALDVLNEHVDRLTFPLDHYKWHASKALIGSDGS EAKKALEAAKVKKSGFRFHQDVGLVGKEHEKTIKHLCKICT >Mature_200_residues SSDDWYRNKNWNASIEEHFYSKLKRARTQRDQYLVIQALTLADNDPEVSLRLVNEYFESRKDKFDDVRALLAKATAFKAL NDLDGCISAFKEVLEREREFPNHQTGVYLDYPYLVATRKIENEYANALDVLNEHVDRLTFPLDHYKWHASKALIGSDGSE AKKALEAAKVKKSGFRFHQDVGLVGKEHEKTIKHLCKICT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23297; Mature: 23166
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDDWYRNKNWNASIEEHFYSKLKRARTQRDQYLVIQALTLADNDPEVSLRLVNEYFES CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEHEEEHHHCCCCCHHHHHHHHHHHHH RKDKFDDVRALLAKATAFKALNDLDGCISAFKEVLEREREFPNHQTGVYLDYPYLVATRK HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHH IENEYANALDVLNEHVDRLTFPLDHYKWHASKALIGSDGSEAKKALEAAKVKKSGFRFHQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH DVGLVGKEHEKTIKHLCKICT HHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SSDDWYRNKNWNASIEEHFYSKLKRARTQRDQYLVIQALTLADNDPEVSLRLVNEYFES CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEHEEEHHHCCCCCHHHHHHHHHHHHH RKDKFDDVRALLAKATAFKALNDLDGCISAFKEVLEREREFPNHQTGVYLDYPYLVATRK HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHH IENEYANALDVLNEHVDRLTFPLDHYKWHASKALIGSDGSEAKKALEAAKVKKSGFRFHQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH DVGLVGKEHEKTIKHLCKICT HHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA