Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117920814

Identifier: 117920814

GI number: 117920814

Start: 2850023

End: 2850682

Strand: Reverse

Name: 117920814

Synonym: Shewana3_2371

Alternate gene names: NA

Gene position: 2850682-2850023 (Counterclockwise)

Preceding gene: 117920815

Following gene: 117920811

Centisome position: 57.33

GC content: 53.18

Gene sequence:

>660_bases
ATGGGAAAACACATCGCTAAGCATGTTTCTGCTAGCAAGCGTCGACCTAAGCAGACATTAACACGCATTGCGCGCCCACT
TGGGATGGCATTGGTGGCGGGGCAGCTGTTTGGCTGCTTTGCCCCGCAGGCCCAGCCTAATCCGCCAAAAACGGATATTC
GTACCGAGGCGGCGAAACAACCTGAAGTGGTACAGACCGCCGATTTAGCGGCCAAACTACAGGGAATTGAAGCAAAATCC
AGCTTAAAAGTGGAACAGGTTTCGAACAATCAGTCTCAGGCTTTGCTCACTGGTACGCTTTCCCTCGATGCTTTTGTGGA
TTTTAAACAACCCCTTAAGGCGACATTAACGGTTCGCAATCCCTCGACTCAGGCGGTTGCACTGCGTTATCACTCGGGCA
TGACAGCCGATTTGCTACTGACCACAGTGCAAGGAAAGCGTCTTTGGGCTTGGTCTGACGATATGATGTTTACTCAAGCC
CTGCGTGATACTCAGTTAGCGGCTGGTGAGGAGCTGGTGGTCAGGTTTGCGATCCCGGCAAAAGCCTTGGCTGGGATCCC
AAATGAAGGAGCCCATCTTGAGGCGCAATTTGCCGCTAAGGCGCTGGAGAGTGAATTGCCAGCAATGGCGCCCGTGGTGT
ACTTGCTCACCCTCGAGTAG

Upstream 100 bases:

>100_bases
ATACCCAAGCGCTGCTGAACAATCAGTTGAAGGAAGAAACGGATAAAGCCAAGGATAAATTAAAGGACTCCCTACTGAAA
AAACTCGGTGGTTTTTAGGC

Downstream 100 bases:

>100_bases
CGGTTGCTAAACATAGCGCCATTCTTGCAAACTACTGTGTATTTAACATTGCAGATTGAAAGACAGCAGGCTCGAAGTAC
AAGTCTCGAGGGGATTTTGG

Product: intracellular proteinase inhibitor domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MGKHIAKHVSASKRRPKQTLTRIARPLGMALVAGQLFGCFAPQAQPNPPKTDIRTEAAKQPEVVQTADLAAKLQGIEAKS
SLKVEQVSNNQSQALLTGTLSLDAFVDFKQPLKATLTVRNPSTQAVALRYHSGMTADLLLTTVQGKRLWAWSDDMMFTQA
LRDTQLAAGEELVVRFAIPAKALAGIPNEGAHLEAQFAAKALESELPAMAPVVYLLTLE

Sequences:

>Translated_219_residues
MGKHIAKHVSASKRRPKQTLTRIARPLGMALVAGQLFGCFAPQAQPNPPKTDIRTEAAKQPEVVQTADLAAKLQGIEAKS
SLKVEQVSNNQSQALLTGTLSLDAFVDFKQPLKATLTVRNPSTQAVALRYHSGMTADLLLTTVQGKRLWAWSDDMMFTQA
LRDTQLAAGEELVVRFAIPAKALAGIPNEGAHLEAQFAAKALESELPAMAPVVYLLTLE
>Mature_218_residues
GKHIAKHVSASKRRPKQTLTRIARPLGMALVAGQLFGCFAPQAQPNPPKTDIRTEAAKQPEVVQTADLAAKLQGIEAKSS
LKVEQVSNNQSQALLTGTLSLDAFVDFKQPLKATLTVRNPSTQAVALRYHSGMTADLLLTTVQGKRLWAWSDDMMFTQAL
RDTQLAAGEELVVRFAIPAKALAGIPNEGAHLEAQFAAKALESELPAMAPVVYLLTLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23622; Mature: 23490

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKHIAKHVSASKRRPKQTLTRIARPLGMALVAGQLFGCFAPQAQPNPPKTDIRTEAAKQ
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCC
PEVVQTADLAAKLQGIEAKSSLKVEQVSNNQSQALLTGTLSLDAFVDFKQPLKATLTVRN
CCHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCCEEEEEEEEHHHHHCCCCCCEEEEEEEC
PSTQAVALRYHSGMTADLLLTTVQGKRLWAWSDDMMFTQALRDTQLAAGEELVVRFAIPA
CCCCEEEEEECCCCCHHHEEEEECCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCH
KALAGIPNEGAHLEAQFAAKALESELPAMAPVVYLLTLE
HHHCCCCCCCCEEHHHHHHHHHHHHCCHHCCEEEEEECC
>Mature Secondary Structure 
GKHIAKHVSASKRRPKQTLTRIARPLGMALVAGQLFGCFAPQAQPNPPKTDIRTEAAKQ
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCC
PEVVQTADLAAKLQGIEAKSSLKVEQVSNNQSQALLTGTLSLDAFVDFKQPLKATLTVRN
CCHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCCEEEEEEEEHHHHHCCCCCCEEEEEEEC
PSTQAVALRYHSGMTADLLLTTVQGKRLWAWSDDMMFTQALRDTQLAAGEELVVRFAIPA
CCCCEEEEEECCCCCHHHEEEEECCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCH
KALAGIPNEGAHLEAQFAAKALESELPAMAPVVYLLTLE
HHHCCCCCCCCEEHHHHHHHHHHHHCCHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA