| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920807
Identifier: 117920807
GI number: 117920807
Start: 2842468
End: 2843652
Strand: Reverse
Name: 117920807
Synonym: Shewana3_2364
Alternate gene names: NA
Gene position: 2843652-2842468 (Counterclockwise)
Preceding gene: 117920808
Following gene: 117920800
Centisome position: 57.19
GC content: 53.42
Gene sequence:
>1185_bases ATGGTCGGCAGCATGACGCTGTTGATCCAGCGGGAGTACGGTTCGGCGCCAGTGGTGATCGTATTGCCCGACGGCAGCAA GTGGTACGCCAACCGTCACCCTGAAACGGTGAAATGGGTCGATGGCATTACTGGCGACATTATTTATATCGAATCGCCTC AGCCTGGCCCTTGGCAGCTGGTGGGTAAGGTGGTGCCGGGATCGCAACTTAAGCGAGTCTCTAAGCTTGAAATTGAAGTG CAGCAATTGCCTCAGCCGCTATTCCAAGGTGAAGAAACCAAAGTGGTTGCTCAATTGATGGGGGATGCGGAGCGGGTGCG CATGCCGGGGCTCGATTATCTTGTCGAATGGACAGCCCATTTTGTGAGTAAGCATCGTGCGGGGGATGAAAACTTTGCCG CCGGTGACATTATCGTCGGCTCTTATAAAGATAATGGCGAAAAGTTCGATGAAAGGCCTGACGATGGCATGTTTACCAGT GATATCAATCTGAAGCAGCCCTGGGGCGAGTACGACTTTGTGGTCCAAGCCCGCAATAACGTGTTTGAACGACAGGTTTC TTTTCCCTTTACCTTATCGCCACGCCCCGTGAATGCCGAGGTGATCACCCCTGATGACCCGTTAACGGGGCGATGGAAAA TCATGTTGCACGCCGATAGCAGTGTGCTGCAATTGGCTGAAACCCATTTTTCATTCGAGCTTGTTGGGCCAGCAGGTTTA CAGCTTCCCCTTGTCGTTCATGGGCTTAAGGAGAGCGATACTGAACTGCCTATACCACCAGTGACCGAGTTTGGTAGTTA CCGTATTAAAGGCACTGTGGCGACAACCACAGTCACAGGCCGTGAAATCCTGCTCGATTTGCCAGAACTCTTCTTTAACT TAGTGCAGCCTCCTGAACCGCCACCGAGTGAAGAGGAGCTAGCCGCCGTTGCTGCGCAAAAGGCCGCCGAGGAAGAGGCC ATAGCAAAACAGGATGCGCTGTTTTGGATCATTACCATCAATGCCGTGCTAGTACTGCTTGGGGTCGCGGGGCTGATTTT CTGGCGTAAGCGTCAAAGTCTCGCGCAGGCTCTGGCCGCCGCAGAGCAACGGATGTTAGATGAGGCCGGGCAGAATAAGC CAGAGGCGCCATCCCTCGATGAGATTGATTTGACCATGCCGGATGAGCCGGATAATCGCCGATAA
Upstream 100 bases:
>100_bases GAGTGACGCCATTCAAGCTAAGCCGCCCAAACCAGCGACTCGAAAAGTGGTGCCCATCGATACCGCCTCTGAGCTTAAAA ATCGCTTTCGGGTGGACCAT
Downstream 100 bases:
>100_bases AAGCACAGAACTGTTTGGCTATTTCGACGTCAGCTTGCAGATATTTTGTCCACTTATCATGGGGTTTTGTTAAGTTTGGC GAAATTTTAACTAAACGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MVGSMTLLIQREYGSAPVVIVLPDGSKWYANRHPETVKWVDGITGDIIYIESPQPGPWQLVGKVVPGSQLKRVSKLEIEV QQLPQPLFQGEETKVVAQLMGDAERVRMPGLDYLVEWTAHFVSKHRAGDENFAAGDIIVGSYKDNGEKFDERPDDGMFTS DINLKQPWGEYDFVVQARNNVFERQVSFPFTLSPRPVNAEVITPDDPLTGRWKIMLHADSSVLQLAETHFSFELVGPAGL QLPLVVHGLKESDTELPIPPVTEFGSYRIKGTVATTTVTGREILLDLPELFFNLVQPPEPPPSEEELAAVAAQKAAEEEA IAKQDALFWIITINAVLVLLGVAGLIFWRKRQSLAQALAAAEQRMLDEAGQNKPEAPSLDEIDLTMPDEPDNRR
Sequences:
>Translated_394_residues MVGSMTLLIQREYGSAPVVIVLPDGSKWYANRHPETVKWVDGITGDIIYIESPQPGPWQLVGKVVPGSQLKRVSKLEIEV QQLPQPLFQGEETKVVAQLMGDAERVRMPGLDYLVEWTAHFVSKHRAGDENFAAGDIIVGSYKDNGEKFDERPDDGMFTS DINLKQPWGEYDFVVQARNNVFERQVSFPFTLSPRPVNAEVITPDDPLTGRWKIMLHADSSVLQLAETHFSFELVGPAGL QLPLVVHGLKESDTELPIPPVTEFGSYRIKGTVATTTVTGREILLDLPELFFNLVQPPEPPPSEEELAAVAAQKAAEEEA IAKQDALFWIITINAVLVLLGVAGLIFWRKRQSLAQALAAAEQRMLDEAGQNKPEAPSLDEIDLTMPDEPDNRR >Mature_394_residues MVGSMTLLIQREYGSAPVVIVLPDGSKWYANRHPETVKWVDGITGDIIYIESPQPGPWQLVGKVVPGSQLKRVSKLEIEV QQLPQPLFQGEETKVVAQLMGDAERVRMPGLDYLVEWTAHFVSKHRAGDENFAAGDIIVGSYKDNGEKFDERPDDGMFTS DINLKQPWGEYDFVVQARNNVFERQVSFPFTLSPRPVNAEVITPDDPLTGRWKIMLHADSSVLQLAETHFSFELVGPAGL QLPLVVHGLKESDTELPIPPVTEFGSYRIKGTVATTTVTGREILLDLPELFFNLVQPPEPPPSEEELAAVAAQKAAEEEA IAKQDALFWIITINAVLVLLGVAGLIFWRKRQSLAQALAAAEQRMLDEAGQNKPEAPSLDEIDLTMPDEPDNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43723; Mature: 43723
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGSMTLLIQREYGSAPVVIVLPDGSKWYANRHPETVKWVDGITGDIIYIESPQPGPWQL CCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCHHE VGKVVPGSQLKRVSKLEIEVQQLPQPLFQGEETKVVAQLMGDAERVRMPGLDYLVEWTAH EEECCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHH FVSKHRAGDENFAAGDIIVGSYKDNGEKFDERPDDGMFTSDINLKQPWGEYDFVVQARNN HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCC VFERQVSFPFTLSPRPVNAEVITPDDPLTGRWKIMLHADSSVLQLAETHFSFELVGPAGL HHHHHCCCCEEECCCCCCCEEECCCCCCCCEEEEEEECCCHHHHHHHHCCEEEEECCCCC QLPLVVHGLKESDTELPIPPVTEFGSYRIKGTVATTTVTGREILLDLPELFFNLVQPPEP EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCC PPSEEELAAVAAQKAAEEEAIAKQDALFWIITINAVLVLLGVAGLIFWRKRQSLAQALAA CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEQRMLDEAGQNKPEAPSLDEIDLTMPDEPDNRR HHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure MVGSMTLLIQREYGSAPVVIVLPDGSKWYANRHPETVKWVDGITGDIIYIESPQPGPWQL CCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCHHE VGKVVPGSQLKRVSKLEIEVQQLPQPLFQGEETKVVAQLMGDAERVRMPGLDYLVEWTAH EEECCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHH FVSKHRAGDENFAAGDIIVGSYKDNGEKFDERPDDGMFTSDINLKQPWGEYDFVVQARNN HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCC VFERQVSFPFTLSPRPVNAEVITPDDPLTGRWKIMLHADSSVLQLAETHFSFELVGPAGL HHHHHCCCCEEECCCCCCCEEECCCCCCCCEEEEEEECCCHHHHHHHHCCEEEEECCCCC QLPLVVHGLKESDTELPIPPVTEFGSYRIKGTVATTTVTGREILLDLPELFFNLVQPPEP EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCC PPSEEELAAVAAQKAAEEEAIAKQDALFWIITINAVLVLLGVAGLIFWRKRQSLAQALAA CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEQRMLDEAGQNKPEAPSLDEIDLTMPDEPDNRR HHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA