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The map label for this gene is 117920757

Identifier: 117920757

GI number: 117920757

Start: 2785613

End: 2787742

Strand: Direct

Name: 117920757

Synonym: Shewana3_2314

Alternate gene names: NA

Gene position: 2785613-2787742 (Clockwise)

Preceding gene: 117920756

Following gene: 117920758

Centisome position: 56.02

GC content: 47.7

Gene sequence:

>2130_bases
TTGAATTTTCTATTATCTAACAACAGCAAACGTGGCACTTATCGCTGGCATCAGGGATTAACCCTACTGGCACTCAGCAG
CATTAGCACCTTTAACGCCATGGCCGCTCAAGCAATCACTACTCAAGCAACGGCGTTACAGGCAGTAGCGGCTAAAACTA
TGGCTGCCAATCCAAATGTAGGCGAAGGCGAAATGCTGCCAGCCCATCACCATGGCGAGCAAGCAAATAAGTTTAAACCC
GTTGTTTATCAAATTTTTACCCGACTCTATGGCAATAAAAACACCACCAATAAACCTTGGGGCACGATTAGCGAAAACGG
TGTGGGTAAATTTAATGATATTGATGATACTGCACTCAAAAGTATCAAAGACTTAGGTGTTACCCATGTGTGGTATACGG
GTGTACCCCACCACGCCCTAATTGGCGATTACAGTGCTATTGGCGTAAGTCACGATGATCCCGATGTGGTTAAGGGCCGC
GCTGGCTCGCCCTATGCGGTTAAAGATTATTACAACGTAAACCCCGATTTAGCGGTCGATCCCGCAAAGCGTTTACAGGA
GTTTCAGGCACTTATCGAGCGCACCCACAAGCAAGGCTTAAAGGTGATTATCGATATAGTGCCCAACCATGTGGCGCGTA
ATTACCATTCCATCACTAAGCCCGAGGGTGTGCACGATTTTGGTGAAGATGATAATCAAACCCTTGAATATGCAAAGCAT
AATAACTTTTACTATGTGATTGATAAAAAGCAATCCTCAGGCTTTCAAGTGCCCGATTTGCCTGAGAGCCTCAAACCGTT
AGGCGGTGAATCGCATCCCCTAAGTGATGGTCAATTTAAGGAAATCCCCGCCAAATGGACGGGCAATGGCTCACGCCTTG
CTAAGCCGGATATGAACGACTGGTATGAAACCGTTAAAATCAATTACGGTGTCCGCCCCGATGGCAGCCATGATTTCCCC
GCACTGCCACCAGGTTATGCCACTCTCGGCGCCGAGCAGCACTACGCATTTTGGCAGCAACATAGTCATGAATTGCCTAA
CTCTTGGATCAAATTCAATCAAATTGCCCAGTATTGGTTAGCGATGGGAGTCGATGGATTTCGTTACGATATGGCCGAAA
TGGTACCAGTCGAGTTTTGGAGCTATTTAAATAGTCATATAAAACATAGCCATCACGAAGCTTTTATCTTAGCTGAGGTC
TATAACCCCGCACTGTATCGCGACTATATTCAGCTCGGCAAAATGGACTACCTCTACGACAAGGTCGATCTTTACGACAC
CCTCAAAGCCATTATGGCAGGGCAAAAAAGTACCGCGCAGATCGCCGCGGATCAGGCCAAAGTACATGATATCGACACGC
ATATGCTGCATTTTTTAGAAAACCACGACGAGCAGCGCATCGCCAATGCCGCCTTTTTAGGTAGTTTAAGTGGTAATGCC
TCTACGGATGCGGTCGATCCCCGCTACGCCCTGCCCGCAATGGTGGTGTCAGCAACCTTAAGTACCTCACCCACCTTGAT
TTATTTTGGTCAAGAAGTAGGAGAAGCGGCGACGCAAAACCTAGGCTTTGGCCATGCTTCGCGCACCAGTATTTTTGATT
ATGCGGGTGTTCCCGCCCATCAGCGCTGGATGAATCAAGGTAAATTTGATGGCGGCCAATCAACCACGGCAGAAGTCGCG
CTGCGCACCTACTATCAAAAATTATTGAACCTCAGCACAGGGAAAAATGCGCCCGCGCTCTTAGGACAATATGACTCGCT
AGATGCTGCTAACCGCAGCGCGGTATCGGCCGCAAAGGCTAGCAATAAGGCTAACAATAAGACAAACAATGGCAGCGCAA
CGGGTTATGATGACTCAACCTTCGCCTTTGTCCGCTTTGAGGCTAATACCGCCAATAACAAAGGTCAAAAGCTGATTATT
GTCAGTAACTTTAGTCAAACCCAAGCCAAGTTATTTTCACTTAAACTGCCCCAATCTCTGATTGCGCAATGGCGGTTAAC
CGATGCCACCTATCCGCTTAAGGATTTGCTGGAAGACCATGAGGCGCAGTTGGTTGTCGAACAAGGCGAAGGACAAGTTA
AATTGCAGCTAGCGCCTCTCTCCACAGCCATTTTTGAACTCGCCCATTAG

Upstream 100 bases:

>100_bases
CAATCATCAATAACCCATATTCAATTAAGCAGCTAAGCATGCTTAGCTAACAGCGCGGCCAAACCATAGTTTGGCCGCCA
AGTCAGTAAAGGAACCTAGG

Downstream 100 bases:

>100_bases
CCAGATAAGGTAAGATAAAGATCAGAGATCAGCACCAGAGTCACACACCGTTGTGACTCTGGCTTTTTTAAAACACACTA
GCGTAAACATCAGTTAAACA

Product: alpha amylase catalytic subunit

Products: NA

Alternate protein names: Glycosidase; Alpha-Amylase Family Protein; Alpha-Amylase; Alpha Amylase; Glycoside Hydrolase Family Alpha-Glucosidase; Alpha Amylase Family Protein; Alpha Amylase Domain-Containing Protein; Alpha Amylase Catalytic Subunit; LOW QUALITY PROTEIN Alpha-Amylase Family Protein

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MNFLLSNNSKRGTYRWHQGLTLLALSSISTFNAMAAQAITTQATALQAVAAKTMAANPNVGEGEMLPAHHHGEQANKFKP
VVYQIFTRLYGNKNTTNKPWGTISENGVGKFNDIDDTALKSIKDLGVTHVWYTGVPHHALIGDYSAIGVSHDDPDVVKGR
AGSPYAVKDYYNVNPDLAVDPAKRLQEFQALIERTHKQGLKVIIDIVPNHVARNYHSITKPEGVHDFGEDDNQTLEYAKH
NNFYYVIDKKQSSGFQVPDLPESLKPLGGESHPLSDGQFKEIPAKWTGNGSRLAKPDMNDWYETVKINYGVRPDGSHDFP
ALPPGYATLGAEQHYAFWQQHSHELPNSWIKFNQIAQYWLAMGVDGFRYDMAEMVPVEFWSYLNSHIKHSHHEAFILAEV
YNPALYRDYIQLGKMDYLYDKVDLYDTLKAIMAGQKSTAQIAADQAKVHDIDTHMLHFLENHDEQRIANAAFLGSLSGNA
STDAVDPRYALPAMVVSATLSTSPTLIYFGQEVGEAATQNLGFGHASRTSIFDYAGVPAHQRWMNQGKFDGGQSTTAEVA
LRTYYQKLLNLSTGKNAPALLGQYDSLDAANRSAVSAAKASNKANNKTNNGSATGYDDSTFAFVRFEANTANNKGQKLII
VSNFSQTQAKLFSLKLPQSLIAQWRLTDATYPLKDLLEDHEAQLVVEQGEGQVKLQLAPLSTAIFELAH

Sequences:

>Translated_709_residues
MNFLLSNNSKRGTYRWHQGLTLLALSSISTFNAMAAQAITTQATALQAVAAKTMAANPNVGEGEMLPAHHHGEQANKFKP
VVYQIFTRLYGNKNTTNKPWGTISENGVGKFNDIDDTALKSIKDLGVTHVWYTGVPHHALIGDYSAIGVSHDDPDVVKGR
AGSPYAVKDYYNVNPDLAVDPAKRLQEFQALIERTHKQGLKVIIDIVPNHVARNYHSITKPEGVHDFGEDDNQTLEYAKH
NNFYYVIDKKQSSGFQVPDLPESLKPLGGESHPLSDGQFKEIPAKWTGNGSRLAKPDMNDWYETVKINYGVRPDGSHDFP
ALPPGYATLGAEQHYAFWQQHSHELPNSWIKFNQIAQYWLAMGVDGFRYDMAEMVPVEFWSYLNSHIKHSHHEAFILAEV
YNPALYRDYIQLGKMDYLYDKVDLYDTLKAIMAGQKSTAQIAADQAKVHDIDTHMLHFLENHDEQRIANAAFLGSLSGNA
STDAVDPRYALPAMVVSATLSTSPTLIYFGQEVGEAATQNLGFGHASRTSIFDYAGVPAHQRWMNQGKFDGGQSTTAEVA
LRTYYQKLLNLSTGKNAPALLGQYDSLDAANRSAVSAAKASNKANNKTNNGSATGYDDSTFAFVRFEANTANNKGQKLII
VSNFSQTQAKLFSLKLPQSLIAQWRLTDATYPLKDLLEDHEAQLVVEQGEGQVKLQLAPLSTAIFELAH
>Mature_709_residues
MNFLLSNNSKRGTYRWHQGLTLLALSSISTFNAMAAQAITTQATALQAVAAKTMAANPNVGEGEMLPAHHHGEQANKFKP
VVYQIFTRLYGNKNTTNKPWGTISENGVGKFNDIDDTALKSIKDLGVTHVWYTGVPHHALIGDYSAIGVSHDDPDVVKGR
AGSPYAVKDYYNVNPDLAVDPAKRLQEFQALIERTHKQGLKVIIDIVPNHVARNYHSITKPEGVHDFGEDDNQTLEYAKH
NNFYYVIDKKQSSGFQVPDLPESLKPLGGESHPLSDGQFKEIPAKWTGNGSRLAKPDMNDWYETVKINYGVRPDGSHDFP
ALPPGYATLGAEQHYAFWQQHSHELPNSWIKFNQIAQYWLAMGVDGFRYDMAEMVPVEFWSYLNSHIKHSHHEAFILAEV
YNPALYRDYIQLGKMDYLYDKVDLYDTLKAIMAGQKSTAQIAADQAKVHDIDTHMLHFLENHDEQRIANAAFLGSLSGNA
STDAVDPRYALPAMVVSATLSTSPTLIYFGQEVGEAATQNLGFGHASRTSIFDYAGVPAHQRWMNQGKFDGGQSTTAEVA
LRTYYQKLLNLSTGKNAPALLGQYDSLDAANRSAVSAAKASNKANNKTNNGSATGYDDSTFAFVRFEANTANNKGQKLII
VSNFSQTQAKLFSLKLPQSLIAQWRLTDATYPLKDLLEDHEAQLVVEQGEGQVKLQLAPLSTAIFELAH

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78514; Mature: 78514

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLLSNNSKRGTYRWHQGLTLLALSSISTFNAMAAQAITTQATALQAVAAKTMAANPNV
CCEEECCCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GEGEMLPAHHHGEQANKFKPVVYQIFTRLYGNKNTTNKPWGTISENGVGKFNDIDDTALK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
SIKDLGVTHVWYTGVPHHALIGDYSAIGVSHDDPDVVKGRAGSPYAVKDYYNVNPDLAVD
HHHHCCCEEEEECCCCCHHHHCCCCEECCCCCCCHHHCCCCCCCEEEECEECCCCCCEEC
PAKRLQEFQALIERTHKQGLKVIIDIVPNHVARNYHSITKPEGVHDFGEDDNQTLEYAKH
HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEC
NNFYYVIDKKQSSGFQVPDLPESLKPLGGESHPLSDGQFKEIPAKWTGNGSRLAKPDMND
CCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCEECCCCCEECCCCHHH
WYETVKINYGVRPDGSHDFPALPPGYATLGAEQHYAFWQQHSHELPNSWIKFNQIAQYWL
HHEEEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AMGVDGFRYDMAEMVPVEFWSYLNSHIKHSHHEAFILAEVYNPALYRDYIQLGKMDYLYD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHCCHHHHHH
KVDLYDTLKAIMAGQKSTAQIAADQAKVHDIDTHMLHFLENHDEQRIANAAFLGSLSGNA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCC
STDAVDPRYALPAMVVSATLSTSPTLIYFGQEVGEAATQNLGFGHASRTSIFDYAGVPAH
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCHHHCCCCCHH
QRWMNQGKFDGGQSTTAEVALRTYYQKLLNLSTGKNAPALLGQYDSLDAANRSAVSAAKA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHH
SNKANNKTNNGSATGYDDSTFAFVRFEANTANNKGQKLIIVSNFSQTQAKLFSLKLPQSL
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHCCCHHH
IAQWRLTDATYPLKDLLEDHEAQLVVEQGEGQVKLQLAPLSTAIFELAH
HHHEECCCCCCCHHHHHCCCCCEEEEECCCCEEEEEEECHHHHHHHHCC
>Mature Secondary Structure
MNFLLSNNSKRGTYRWHQGLTLLALSSISTFNAMAAQAITTQATALQAVAAKTMAANPNV
CCEEECCCCCCCCCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GEGEMLPAHHHGEQANKFKPVVYQIFTRLYGNKNTTNKPWGTISENGVGKFNDIDDTALK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
SIKDLGVTHVWYTGVPHHALIGDYSAIGVSHDDPDVVKGRAGSPYAVKDYYNVNPDLAVD
HHHHCCCEEEEECCCCCHHHHCCCCEECCCCCCCHHHCCCCCCCEEEECEECCCCCCEEC
PAKRLQEFQALIERTHKQGLKVIIDIVPNHVARNYHSITKPEGVHDFGEDDNQTLEYAKH
HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEC
NNFYYVIDKKQSSGFQVPDLPESLKPLGGESHPLSDGQFKEIPAKWTGNGSRLAKPDMND
CCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCEECCCCCEECCCCHHH
WYETVKINYGVRPDGSHDFPALPPGYATLGAEQHYAFWQQHSHELPNSWIKFNQIAQYWL
HHEEEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AMGVDGFRYDMAEMVPVEFWSYLNSHIKHSHHEAFILAEVYNPALYRDYIQLGKMDYLYD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHCCHHHHHH
KVDLYDTLKAIMAGQKSTAQIAADQAKVHDIDTHMLHFLENHDEQRIANAAFLGSLSGNA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCC
STDAVDPRYALPAMVVSATLSTSPTLIYFGQEVGEAATQNLGFGHASRTSIFDYAGVPAH
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCHHHCCCCCHH
QRWMNQGKFDGGQSTTAEVALRTYYQKLLNLSTGKNAPALLGQYDSLDAANRSAVSAAKA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHH
SNKANNKTNNGSATGYDDSTFAFVRFEANTANNKGQKLIIVSNFSQTQAKLFSLKLPQSL
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHCCCHHH
IAQWRLTDATYPLKDLLEDHEAQLVVEQGEGQVKLQLAPLSTAIFELAH
HHHEECCCCCCCHHHHHCCCCCEEEEECCCCEEEEEEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA