| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920696
Identifier: 117920696
GI number: 117920696
Start: 2715068
End: 2715784
Strand: Reverse
Name: 117920696
Synonym: Shewana3_2253
Alternate gene names: NA
Gene position: 2715784-2715068 (Counterclockwise)
Preceding gene: 117920702
Following gene: 117920695
Centisome position: 54.62
GC content: 47.0
Gene sequence:
>717_bases ATGACAACAAACACTATTGTGACTTCGGATGATATTTTACTGAAGTTATGCCACTCGGTCGCCCATGTGTTATCGAGCAC CAGTGCCAGCCATGTGAGCCACGCGGGCATGGTGCAAAGCATTACTCGCACCCGCTTAAAACCCGACCTAGGCTGTTTTT CGATTTTTGATGGCGGCTTTTCAGGGTTAGTGGTAATCAACTTTTCAGCCCCAGCGGCCATCGAAATCTATCGCCGCTAT ATGCTCAATATGGGCATGCCAGAGGAAGAGCTCGCCTTTTCCCACACGTCCGATGAAGTGGGGAACGTGATGGGCGAGTT GATGAACCAAATCTTGGGCGACTTTATTAATAAGGTTTCCAAGGAGCTGCAAACCTCCATTAGCCAAAGTCAGCCTAAAA TGTTAACCATAAACAAAGAGCTGACGATTTCTATCGATGCAAACTTAGACGATGCTGTCGCAAGACGTGTGTCCTTTAAA ACTGAAAATAATCATATTTTCTACCTCGAATTTGCCATGGATAAGACCGAGTTTATTAAACTCGATGAGTTTGAATACGA CGAAGAGTTCGACCCTGACAGCTTGCTCGAGCAGCATGGTCTTGGTGCTAATGCGTCTTCGCACCCAGATACCGCATCAC CTTGGAGCCGTATGACGGATAAACCCGCCATCGCCAGTACGAATGCCGACGATTTGCTCGATGAGTTAGGGATTTAA
Upstream 100 bases:
>100_bases CTTAATATTTCAGAGCCAGACTGCTAATTAATTGTTTTGGTTTTGATTTTTTATGCTTTTACGCGCAAGATTAATCATCG GTTTAGTTTGAGAATGGATT
Downstream 100 bases:
>100_bases CTTTATTTAGTGCTGTTGGGTGTCGGTATAAGCCTTAGTTGTATCGACACTGCTTTGTTAGCATGGGTGAGAGGGCGTTT GTTGTACAAGCTGTGCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTTNTIVTSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSITRTRLKPDLGCFSIFDGGFSGLVVINFSAPAAIEIYRRY MLNMGMPEEELAFSHTSDEVGNVMGELMNQILGDFINKVSKELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFK TENNHIFYLEFAMDKTEFIKLDEFEYDEEFDPDSLLEQHGLGANASSHPDTASPWSRMTDKPAIASTNADDLLDELGI
Sequences:
>Translated_238_residues MTTNTIVTSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSITRTRLKPDLGCFSIFDGGFSGLVVINFSAPAAIEIYRRY MLNMGMPEEELAFSHTSDEVGNVMGELMNQILGDFINKVSKELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFK TENNHIFYLEFAMDKTEFIKLDEFEYDEEFDPDSLLEQHGLGANASSHPDTASPWSRMTDKPAIASTNADDLLDELGI >Mature_237_residues TTNTIVTSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSITRTRLKPDLGCFSIFDGGFSGLVVINFSAPAAIEIYRRYM LNMGMPEEELAFSHTSDEVGNVMGELMNQILGDFINKVSKELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFKT ENNHIFYLEFAMDKTEFIKLDEFEYDEEFDPDSLLEQHGLGANASSHPDTASPWSRMTDKPAIASTNADDLLDELGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26314; Mature: 26183
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNTIVTSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSITRTRLKPDLGCFSIFDGGF CCCCCEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC SGLVVINFSAPAAIEIYRRYMLNMGMPEEELAFSHTSDEVGNVMGELMNQILGDFINKVS CEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH KELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFKTENNHIFYLEFAMDKTEFIK HHHHHHHHHCCCCEEEECCEEEEEEECCCHHHHHHHHHEEECCCEEEEEEEECCCCCEEE LDEFEYDEEFDPDSLLEQHGLGANASSHPDTASPWSRMTDKPAIASTNADDLLDELGI ECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TTNTIVTSDDILLKLCHSVAHVLSSTSASHVSHAGMVQSITRTRLKPDLGCFSIFDGGF CCCCEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC SGLVVINFSAPAAIEIYRRYMLNMGMPEEELAFSHTSDEVGNVMGELMNQILGDFINKVS CEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH KELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFKTENNHIFYLEFAMDKTEFIK HHHHHHHHHCCCCEEEECCEEEEEEECCCHHHHHHHHHEEECCCEEEEEEEECCCCCEEE LDEFEYDEEFDPDSLLEQHGLGANASSHPDTASPWSRMTDKPAIASTNADDLLDELGI ECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA