Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117920691

Identifier: 117920691

GI number: 117920691

Start: 2709925

End: 2710320

Strand: Direct

Name: 117920691

Synonym: Shewana3_2248

Alternate gene names: NA

Gene position: 2709925-2710320 (Clockwise)

Preceding gene: 117920690

Following gene: 117920692

Centisome position: 54.5

GC content: 46.21

Gene sequence:

>396_bases
TTGACGGAACAAGCCATGATCAAACTGCACCAGATGCAAGATGTCATCAATTTATTTGATGGCATTAAAGCTGAGGCGCA
ATTACCCGCACAATGCTACGAATGCTCACGTTACATTCGTTGGTCAGAATTTGAGGCAATGCAAGTATACGAGCTTGATT
TTGAACCTTATTTAACCGTTGCAGCAAACTGTGATATGCGTTTTTTTACCCTGTATCAGAGTCAGCACCGCTTATATCTT
GCCCATTGCAACTATGCTGGTCACGCGCCGCGATGGGAAGCTCGCCCCATCACCTTGTCGCAACTGACGGATACCGCGTT
AATGACGAGGCTGATGCAAGAACACGCCTATCAGTTAGGGCTCAATATCAAGCTCGATTTGGATTATCCCGTCTAG

Upstream 100 bases:

>100_bases
TCAGGTTTAGCCGATAGGCTCTGGCGCGATTAAGTGATAACGAATGAATAGTTAACTTATTGATTAACATTAAGAATCAA
CAAGTAAAAGGATCTTAAGA

Downstream 100 bases:

>100_bases
TCTCACTTTGTTGGGCTGAAATGCATTGTACTAGACTGGTTATCATCGAAGTCTTTGGTCACTGATAAAGGAAGCAAGAT
TTGAAGTCGCAAGTAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTEQAMIKLHQMQDVINLFDGIKAEAQLPAQCYECSRYIRWSEFEAMQVYELDFEPYLTVAANCDMRFFTLYQSQHRLYL
AHCNYAGHAPRWEARPITLSQLTDTALMTRLMQEHAYQLGLNIKLDLDYPV

Sequences:

>Translated_131_residues
MTEQAMIKLHQMQDVINLFDGIKAEAQLPAQCYECSRYIRWSEFEAMQVYELDFEPYLTVAANCDMRFFTLYQSQHRLYL
AHCNYAGHAPRWEARPITLSQLTDTALMTRLMQEHAYQLGLNIKLDLDYPV
>Mature_130_residues
TEQAMIKLHQMQDVINLFDGIKAEAQLPAQCYECSRYIRWSEFEAMQVYELDFEPYLTVAANCDMRFFTLYQSQHRLYLA
HCNYAGHAPRWEARPITLSQLTDTALMTRLMQEHAYQLGLNIKLDLDYPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15446; Mature: 15315

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQAMIKLHQMQDVINLFDGIKAEAQLPAQCYECSRYIRWSEFEAMQVYELDFEPYLTV
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEE
AANCDMRFFTLYQSQHRLYLAHCNYAGHAPRWEARPITLSQLTDTALMTRLMQEHAYQLG
EECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC
LNIKLDLDYPV
CEEEEEECCCC
>Mature Secondary Structure 
TEQAMIKLHQMQDVINLFDGIKAEAQLPAQCYECSRYIRWSEFEAMQVYELDFEPYLTV
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEE
AANCDMRFFTLYQSQHRLYLAHCNYAGHAPRWEARPITLSQLTDTALMTRLMQEHAYQLG
EECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC
LNIKLDLDYPV
CEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA