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The map label for this gene is rmuC [H]

Identifier: 117920678

GI number: 117920678

Start: 2687277

End: 2688842

Strand: Direct

Name: rmuC [H]

Synonym: Shewana3_2235

Alternate gene names: 117920678

Gene position: 2687277-2688842 (Clockwise)

Preceding gene: 117920675

Following gene: 117920679

Centisome position: 54.05

GC content: 48.53

Gene sequence:

>1566_bases
ATGCCATTTTCTCAATCTTTTTCCCTCGCCCAGATCATCGGTCTTCTCGCCGTGGCCTTTTTAGGACTGTTAATCGGTGC
CCTACTCAATCAACGTCTCACCCGCTCACGCTGGCAACAGTTTAAAGACGAATTAGAGCAAGAAATGCGGCAAGTAAACG
AAGACGCCGAGCTCTCCCTCGCCCAGCAGCAAGTTTTAGTCGACGACAAAGATAACCAACTGCGCCAATGCCAACAACGC
TTAGAGCAAAAGATAGAACAACTGGGTAAAGCCGAAGCCATGGCCGAGCGCCTGCCGAGTATTGAGCAGCAACTCGCCGA
CAGCCATCGCCGCCAACTCGAGCTCCAACTGGCCTTATCTAAATCCAATGCGATGCAACAGACTATTCAGGCCAAGGCCG
ATGCTCAGCAATCCGCCATGCAGGAAAAAATCGCCACCTTAGAAATGGCCGAAGTTCGCCTACAAACTCAGTTTGAAAAC
CTTGCCAATCGAATTTTCGAAGAGCGCAGCGAAAGCTTTAAGCATCAAAACGCCAATCAGTTAGAAGGTGTGCTCGGGCC
GTTGAAGCAACAGTTAGAAGGCTTTAGACAGCAAATTCGCGAATCCTACAACCATGAGCAGTCGGAGCGCAGCGCCCTCA
AACATCAATTAGAACATCTGCGCGAGCTCAATTTAAAAATGAGTCAGGATGCCATTAACCTGACCAAGGCCTTAAAGGGC
GATAACAAGCAGCAAGGCAACTGGGGCGAAGTGATTTTAGACCGCGTGCTGCAAGAAAGCGGCCTGCGCGAAGGTCACGA
ATATCACACCCAGCAGGATCTGAAGGACGACAGCGGCAAACGCTTTAAACCCGATGTGATCGTGCATTTGCCTGAAAATA
AAGACGTGGTTATCGATGCCAAGATGTCGCTCATCAGCTACGAGCGCTATTTTAATAGCGAAGATCCGCTGGTGCGTGAA
CAGGCCATCAATGAGCATGTTTTATCGATCCGTAATCATATTAAGGGCTTGAGTCAAAAGGATTATCAGCGTTTACACGG
GCTCAAAAGCTTAGATTACGTGTTGATGTTTATTCCGATTGAACCCGCGTTCTTACTAGCCCTAGAGCATGATCCAAGTC
TTGTTAACTTTGCCCTCGAGCAAAATATTATGCTGGTCAGTCCAACCAACCTCTTGGTTGCCCTGCGAACAATCAATAAT
ATCTGGCGTTACGAGTATCAAAACCAGCACGCCCAAACCATTGCCAAACAGGCGGGTCGGATCTACGACAAACTCTGTGG
CTACCTCGACGATATGGAAAAACTCGGCCGCGCTCTGGATAACGCCGAAAAAACCTATCACAGTGCCATGAACAAATTGT
CATCGGGCAAAGGCAATTTAGTGCGTCAAGCACATTTAATGCAGCAACTAGGTGTTGATACCAGCAAGCAACTCGATAAG
ATGTTACTTGAGAAGGCGCTTAACGAAGCCTTAGACGAGAGTGATGCGCAGGACAGCGGTGATAATCAAACTCATCGCGA
TACGCTTTTGACCCATACTGAGGATGCCACCGCACTCGAACAATAA

Upstream 100 bases:

>100_bases
TCATTTGAGTCATCGCCTAAACAGATTGTTAATTAAAGCACTTGAAGCCTTTTTTGGGGCATGCGACCCTAGGCGCCACA
GCTAAAGGAGTGCTAATAAG

Downstream 100 bases:

>100_bases
CGATAAACACGCAGTTTAAAAGCCAATAACTCATAATCCTGAATCGATAGGGAAAAGTCGATTGTAACCTTGATGCCCGG
AGGCAAGTTCTGCATGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MPFSQSFSLAQIIGLLAVAFLGLLIGALLNQRLTRSRWQQFKDELEQEMRQVNEDAELSLAQQQVLVDDKDNQLRQCQQR
LEQKIEQLGKAEAMAERLPSIEQQLADSHRRQLELQLALSKSNAMQQTIQAKADAQQSAMQEKIATLEMAEVRLQTQFEN
LANRIFEERSESFKHQNANQLEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRELNLKMSQDAINLTKALKG
DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDAKMSLISYERYFNSEDPLVRE
QAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPIEPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINN
IWRYEYQNQHAQTIAKQAGRIYDKLCGYLDDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK
MLLEKALNEALDESDAQDSGDNQTHRDTLLTHTEDATALEQ

Sequences:

>Translated_521_residues
MPFSQSFSLAQIIGLLAVAFLGLLIGALLNQRLTRSRWQQFKDELEQEMRQVNEDAELSLAQQQVLVDDKDNQLRQCQQR
LEQKIEQLGKAEAMAERLPSIEQQLADSHRRQLELQLALSKSNAMQQTIQAKADAQQSAMQEKIATLEMAEVRLQTQFEN
LANRIFEERSESFKHQNANQLEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRELNLKMSQDAINLTKALKG
DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDAKMSLISYERYFNSEDPLVRE
QAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPIEPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINN
IWRYEYQNQHAQTIAKQAGRIYDKLCGYLDDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK
MLLEKALNEALDESDAQDSGDNQTHRDTLLTHTEDATALEQ
>Mature_520_residues
PFSQSFSLAQIIGLLAVAFLGLLIGALLNQRLTRSRWQQFKDELEQEMRQVNEDAELSLAQQQVLVDDKDNQLRQCQQRL
EQKIEQLGKAEAMAERLPSIEQQLADSHRRQLELQLALSKSNAMQQTIQAKADAQQSAMQEKIATLEMAEVRLQTQFENL
ANRIFEERSESFKHQNANQLEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRELNLKMSQDAINLTKALKGD
NKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDAKMSLISYERYFNSEDPLVREQ
AINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPIEPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNI
WRYEYQNQHAQTIAKQAGRIYDKLCGYLDDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDKM
LLEKALNEALDESDAQDSGDNQTHRDTLLTHTEDATALEQ

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=421, Percent_Identity=49.8812351543943, Blast_Score=429, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 59771; Mature: 59640

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSQSFSLAQIIGLLAVAFLGLLIGALLNQRLTRSRWQQFKDELEQEMRQVNEDAELSL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AQQQVLVDDKDNQLRQCQQRLEQKIEQLGKAEAMAERLPSIEQQLADSHRRQLELQLALS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KSNAMQQTIQAKADAQQSAMQEKIATLEMAEVRLQTQFENLANRIFEERSESFKHQNANQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRELNLKMSQDAINLTKALKG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDA
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEH
KMSLISYERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCEEEEEEC
EPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGR
CCEEEEEECCCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYDKLCGYLDDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH
MLLEKALNEALDESDAQDSGDNQTHRDTLLTHTEDATALEQ
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure 
PFSQSFSLAQIIGLLAVAFLGLLIGALLNQRLTRSRWQQFKDELEQEMRQVNEDAELSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AQQQVLVDDKDNQLRQCQQRLEQKIEQLGKAEAMAERLPSIEQQLADSHRRQLELQLALS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KSNAMQQTIQAKADAQQSAMQEKIATLEMAEVRLQTQFENLANRIFEERSESFKHQNANQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRELNLKMSQDAINLTKALKG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDA
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEH
KMSLISYERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCEEEEEEC
EPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGR
CCEEEEEECCCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYDKLCGYLDDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH
MLLEKALNEALDESDAQDSGDNQTHRDTLLTHTEDATALEQ
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]