| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is eptA [H]
Identifier: 117920671
GI number: 117920671
Start: 2678067
End: 2679692
Strand: Reverse
Name: eptA [H]
Synonym: Shewana3_2228
Alternate gene names: 117920671
Gene position: 2679692-2678067 (Counterclockwise)
Preceding gene: 117920672
Following gene: 117920670
Centisome position: 53.89
GC content: 46.68
Gene sequence:
>1626_bases GTGCTGACGAGATTTAAAACTCTAACCGTGAACCGCTTCACCTTTATCACCGCATTATTTTACGTTTGCGTTTTTAATAT CCCACTCTTTGAAGTCATCAAGAAAGGCATTGAAAAACAGCCCGATGTGGATCCGATTTTTATCGCATCCATGCCGCTGT TTTTAACCTTTGCACTGAGTTTTGTGTTTTCACTGTTTACGGTGAAATACCTAGTAAAACCCTTTTTCATCATTCTCACG CTGCTGTCATCGAGCGTGTTTTTTGCGGCGCTCAAATACAATGTCGTGTTCGACTACGGCATGATTGAAAACACCTTTCA AACCAACAGCGCCGAAGCCTTGATGTATGTGAACTTTGCTTCCATCCTCAACATGCTGCTCACGGGGATTTTACCCGCCT ATTTGATTTACAAAGCCAATATCCAATACAAGCCATTTTTTAAAGAGTTGCTGCATAAAGTCTTGTTTATGCTGGCGATG TTGGCAGGGCTTGGGATTATCGCCTTCTTCTATTTCCAAGATTACGCCGCCTTTGGCCGCAATAACGATGAGATCAAGCG TTATATTGTGCCGACCTATTTTATTGGCGCGGCCGCTAAGTACATCAATGTGCACTATTTGCAAACGCCGATTGAATACC AACAACTGGGTTTGGATGCCAAAAATGTTACAACCAATGCCAACGGTAAACCTAACCTGTTAGTGCTGGTGGTGGGCGAG ACTGCTCGTTCAATGAACTATCAATACTATGGTTATGATAAACCGACCAACGCTTACACAGAGGGCCAAGGCTTGGTCGC CTTTAAAGATACCCATTCCTGCGGCACGGCCACTGCGGTCTCGCTACCTTGCATGTTCTCGCGGATGGGACGTGAGGATT ACGATTCTCGCCGCGCCTATGCCCAAGACACGGCCATCGATGTGTTAAATCACGGCGGGATTAAAGTGCAGTGGTTTGAT AATGACTCGGGTTGTAAAGGGGTGTGCGATCAGGTTGAAAACATCACCATTGACTTGAATAGCGATCCAGAACTCTGCTC GGGACAATATTGTTTCGACCAAGTGCTGCTCAATAAACTCGACGAAGCCTTAGCCAATGCGGAGCAGAAAGACACTGTGA TAGCCCTGCATGTGATTGGCAGCCATGGGCCGACGTACTTCCTACGCTATCCGCCAGAACACCGTAAATTTACGCCGGAT TGCCCGCGTAGCGACATTCAAAACTGCAGCGCCGAAGAGCTGATGAACACCTATGACAACACGATTTTGTATACCGATTA CATTATCAGTGAAGTGGTCAATAAGCTTAAACAGCAACAGACTAAGTTTGATACCGCCATGTTCTATGTGTCGGATCACG GCGAATCTCTGGGTGAGAAAGGCATGTATTTGCATGGCGCGCCGTACGGTATTGCGCCGATTGAACAGACCAGTATTCCT ATGCTGGCCTGGGTGTCGGAGGATTTCAGCCAAGACAACCATTTGAATATGGCGTGTTTAGCCAAAGAGGCCGAGAAGGG CGGCTTCTCCCACGACAATCTGTTCGACAGTCTGCTGGGATTAATGAATGTTCAGACCCAAGTGTATCAATCTAAGTTAG ATATTTTTGCTCGCTGCCGCGGTTAA
Upstream 100 bases:
>100_bases CAAGTTCAGTTGCTAAGATGACATTCATTTTTAGGCATAAGATTCCCTTAAGAAAACTAAGCTAGTTTCGGCCCACTATT TATTTAAGAGAGCATTACCA
Downstream 100 bases:
>100_bases GTTCAGCGTGCAGGTGAATACATAAAGGAGGATGGCAACATCCTCCTTTATTTTTTTGCGCCTTATCATAATAATTATTG TGTCCCGTATCCAAATCGAA
Product: sulfatase
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MLTRFKTLTVNRFTFITALFYVCVFNIPLFEVIKKGIEKQPDVDPIFIASMPLFLTFALSFVFSLFTVKYLVKPFFIILT LLSSSVFFAALKYNVVFDYGMIENTFQTNSAEALMYVNFASILNMLLTGILPAYLIYKANIQYKPFFKELLHKVLFMLAM LAGLGIIAFFYFQDYAAFGRNNDEIKRYIVPTYFIGAAAKYINVHYLQTPIEYQQLGLDAKNVTTNANGKPNLLVLVVGE TARSMNYQYYGYDKPTNAYTEGQGLVAFKDTHSCGTATAVSLPCMFSRMGREDYDSRRAYAQDTAIDVLNHGGIKVQWFD NDSGCKGVCDQVENITIDLNSDPELCSGQYCFDQVLLNKLDEALANAEQKDTVIALHVIGSHGPTYFLRYPPEHRKFTPD CPRSDIQNCSAEELMNTYDNTILYTDYIISEVVNKLKQQQTKFDTAMFYVSDHGESLGEKGMYLHGAPYGIAPIEQTSIP MLAWVSEDFSQDNHLNMACLAKEAEKGGFSHDNLFDSLLGLMNVQTQVYQSKLDIFARCRG
Sequences:
>Translated_541_residues MLTRFKTLTVNRFTFITALFYVCVFNIPLFEVIKKGIEKQPDVDPIFIASMPLFLTFALSFVFSLFTVKYLVKPFFIILT LLSSSVFFAALKYNVVFDYGMIENTFQTNSAEALMYVNFASILNMLLTGILPAYLIYKANIQYKPFFKELLHKVLFMLAM LAGLGIIAFFYFQDYAAFGRNNDEIKRYIVPTYFIGAAAKYINVHYLQTPIEYQQLGLDAKNVTTNANGKPNLLVLVVGE TARSMNYQYYGYDKPTNAYTEGQGLVAFKDTHSCGTATAVSLPCMFSRMGREDYDSRRAYAQDTAIDVLNHGGIKVQWFD NDSGCKGVCDQVENITIDLNSDPELCSGQYCFDQVLLNKLDEALANAEQKDTVIALHVIGSHGPTYFLRYPPEHRKFTPD CPRSDIQNCSAEELMNTYDNTILYTDYIISEVVNKLKQQQTKFDTAMFYVSDHGESLGEKGMYLHGAPYGIAPIEQTSIP MLAWVSEDFSQDNHLNMACLAKEAEKGGFSHDNLFDSLLGLMNVQTQVYQSKLDIFARCRG >Mature_541_residues MLTRFKTLTVNRFTFITALFYVCVFNIPLFEVIKKGIEKQPDVDPIFIASMPLFLTFALSFVFSLFTVKYLVKPFFIILT LLSSSVFFAALKYNVVFDYGMIENTFQTNSAEALMYVNFASILNMLLTGILPAYLIYKANIQYKPFFKELLHKVLFMLAM LAGLGIIAFFYFQDYAAFGRNNDEIKRYIVPTYFIGAAAKYINVHYLQTPIEYQQLGLDAKNVTTNANGKPNLLVLVVGE TARSMNYQYYGYDKPTNAYTEGQGLVAFKDTHSCGTATAVSLPCMFSRMGREDYDSRRAYAQDTAIDVLNHGGIKVQWFD NDSGCKGVCDQVENITIDLNSDPELCSGQYCFDQVLLNKLDEALANAEQKDTVIALHVIGSHGPTYFLRYPPEHRKFTPD CPRSDIQNCSAEELMNTYDNTILYTDYIISEVVNKLKQQQTKFDTAMFYVSDHGESLGEKGMYLHGAPYGIAPIEQTSIP MLAWVSEDFSQDNHLNMACLAKEAEKGGFSHDNLFDSLLGLMNVQTQVYQSKLDIFARCRG
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=527, Percent_Identity=38.8994307400379, Blast_Score=385, Evalue=1e-108, Organism=Escherichia coli, GI87082286, Length=472, Percent_Identity=25.8474576271186, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI87082223, Length=444, Percent_Identity=23.6486486486486, Blast_Score=89, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 61216; Mature: 61216
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRFKTLTVNRFTFITALFYVCVFNIPLFEVIKKGIEKQPDVDPIFIASMPLFLTFALS CCCEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHH FVFSLFTVKYLVKPFFIILTLLSSSVFFAALKYNVVFDYGMIENTFQTNSAEALMYVNFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCEEEEEEHH SILNMLLTGILPAYLIYKANIQYKPFFKELLHKVLFMLAMLAGLGIIAFFYFQDYAAFGR HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NNDEIKRYIVPTYFIGAAAKYINVHYLQTPIEYQQLGLDAKNVTTNANGKPNLLVLVVGE CCHHHHHHCCHHHHHHHHHHHEEEEEEECCHHHHHHCCCHHCCCCCCCCCCCEEEEEECC TARSMNYQYYGYDKPTNAYTEGQGLVAFKDTHSCGTATAVSLPCMFSRMGREDYDSRRAY CHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH AQDTAIDVLNHGGIKVQWFDNDSGCKGVCDQVENITIDLNSDPELCSGQYCFDQVLLNKL HHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH DEALANAEQKDTVIALHVIGSHGPTYFLRYPPEHRKFTPDCPRSDIQNCSAEELMNTYDN HHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHCC TILYTDYIISEVVNKLKQQQTKFDTAMFYVSDHGESLGEKGMYLHGAPYGIAPIEQTSIP EEEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCC MLAWVSEDFSQDNHLNMACLAKEAEKGGFSHDNLFDSLLGLMNVQTQVYQSKLDIFARCR EEEEHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC G C >Mature Secondary Structure MLTRFKTLTVNRFTFITALFYVCVFNIPLFEVIKKGIEKQPDVDPIFIASMPLFLTFALS CCCEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHH FVFSLFTVKYLVKPFFIILTLLSSSVFFAALKYNVVFDYGMIENTFQTNSAEALMYVNFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCEEEEEEHH SILNMLLTGILPAYLIYKANIQYKPFFKELLHKVLFMLAMLAGLGIIAFFYFQDYAAFGR HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NNDEIKRYIVPTYFIGAAAKYINVHYLQTPIEYQQLGLDAKNVTTNANGKPNLLVLVVGE CCHHHHHHCCHHHHHHHHHHHEEEEEEECCHHHHHHCCCHHCCCCCCCCCCCEEEEEECC TARSMNYQYYGYDKPTNAYTEGQGLVAFKDTHSCGTATAVSLPCMFSRMGREDYDSRRAY CHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH AQDTAIDVLNHGGIKVQWFDNDSGCKGVCDQVENITIDLNSDPELCSGQYCFDQVLLNKL HHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH DEALANAEQKDTVIALHVIGSHGPTYFLRYPPEHRKFTPDCPRSDIQNCSAEELMNTYDN HHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHCC TILYTDYIISEVVNKLKQQQTKFDTAMFYVSDHGESLGEKGMYLHGAPYGIAPIEQTSIP EEEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCC MLAWVSEDFSQDNHLNMACLAKEAEKGGFSHDNLFDSLLGLMNVQTQVYQSKLDIFARCR EEEEHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 8282725 [H]