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The map label for this gene is ychJ [C]

Identifier: 117920603

GI number: 117920603

Start: 2587413

End: 2587907

Strand: Direct

Name: ychJ [C]

Synonym: Shewana3_2159

Alternate gene names: 117920603

Gene position: 2587413-2587907 (Clockwise)

Preceding gene: 117920602

Following gene: 117920608

Centisome position: 52.04

GC content: 46.67

Gene sequence:

>495_bases
ATGACACACGACAAAACCTGCCCTTGCGGCAGCCCAAAAATCTATCAAGATTGCTGTCAAATACTGCATCTAGGGCTCGA
TTCAGGAGCACAACTGGCGACAAGTCCTGAGCAATTAATGCGCTCTCGCTACTGCGCTTTTGTGTTGAAAAATTTTGATT
ACATTATCAAAACACACCATGCAGCTTACCTCGATGGCTTAACCCTTGAGCAGCTCCAACAAGGTCCACATCCCGAATGG
TTAGGGCTCGATGTATTATCCGCCAATGACACTACCCAGCCCGATGGCAGCAAGTTCGGTACTGTAACTTTCAAAGCCTG
GTATAAAATGAGTGGCGAGATTGATGCCATTTACGAGCGCTCTGAGTTTATCTTCGAGCAAGGTCGTTGGTTTTACACTA
AAGGCCATCAAATGCATGCCAAATTACCGGGGCGTAATGATCCTTGCGTCTGCCACAGCGGTAAAAAGTTTAAGCAGTGC
TGCATGAAGGGTTAA

Upstream 100 bases:

>100_bases
CAAACCTGTACCCAATCTTTACTATGGCCGCCAGTTCCCACCATTACCGGACAGCCAAAAGAAAAAGCAGTAATCTATTA
TATTTTAAAGCATTACCATT

Downstream 100 bases:

>100_bases
CCAAGTCCACAGATAAAACAAAAGGCAATCTATTGATTGCCTTTTGTTTTTATATCACCTGTACGACTAATCTAACTGGT
TAATGCGTAACAAGATTAGG

Product: SecC motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTHDKTCPCGSPKIYQDCCQILHLGLDSGAQLATSPEQLMRSRYCAFVLKNFDYIIKTHHAAYLDGLTLEQLQQGPHPEW
LGLDVLSANDTTQPDGSKFGTVTFKAWYKMSGEIDAIYERSEFIFEQGRWFYTKGHQMHAKLPGRNDPCVCHSGKKFKQC
CMKG

Sequences:

>Translated_164_residues
MTHDKTCPCGSPKIYQDCCQILHLGLDSGAQLATSPEQLMRSRYCAFVLKNFDYIIKTHHAAYLDGLTLEQLQQGPHPEW
LGLDVLSANDTTQPDGSKFGTVTFKAWYKMSGEIDAIYERSEFIFEQGRWFYTKGHQMHAKLPGRNDPCVCHSGKKFKQC
CMKG
>Mature_163_residues
THDKTCPCGSPKIYQDCCQILHLGLDSGAQLATSPEQLMRSRYCAFVLKNFDYIIKTHHAAYLDGLTLEQLQQGPHPEWL
GLDVLSANDTTQPDGSKFGTVTFKAWYKMSGEIDAIYERSEFIFEQGRWFYTKGHQMHAKLPGRNDPCVCHSGKKFKQCC
MKG

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=159, Percent_Identity=44.0251572327044, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 18614; Mature: 18483

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDKTCPCGSPKIYQDCCQILHLGLDSGAQLATSPEQLMRSRYCAFVLKNFDYIIKTHH
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
AAYLDGLTLEQLQQGPHPEWLGLDVLSANDTTQPDGSKFGTVTFKAWYKMSGEIDAIYER
HHHHCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHH
SEFIFEQGRWFYTKGHQMHAKLPGRNDPCVCHSGKKFKQCCMKG
HHHHHHCCCEEEECCCEEEEECCCCCCCEEECCCHHHHHHHCCC
>Mature Secondary Structure 
THDKTCPCGSPKIYQDCCQILHLGLDSGAQLATSPEQLMRSRYCAFVLKNFDYIIKTHH
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHH
AAYLDGLTLEQLQQGPHPEWLGLDVLSANDTTQPDGSKFGTVTFKAWYKMSGEIDAIYER
HHHHCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHH
SEFIFEQGRWFYTKGHQMHAKLPGRNDPCVCHSGKKFKQCCMKG
HHHHHHCCCEEEECCCEEEEECCCCCCCEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA