| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920600
Identifier: 117920600
GI number: 117920600
Start: 2584055
End: 2585914
Strand: Direct
Name: 117920600
Synonym: Shewana3_2156
Alternate gene names: NA
Gene position: 2584055-2585914 (Clockwise)
Preceding gene: 117920597
Following gene: 117920602
Centisome position: 51.97
GC content: 49.89
Gene sequence:
>1860_bases ATGGCTATTCTATTGAATCGTCCCACCACTCTTGCGCTCACCATAGCACTAACCTTAGGCGTAACCGCCTGTAATGATGC CCAAAGCAAGGCCGAAACCACTGCAGCACCTGCTGCAACTAATGCTGCGCCCGATAAAGCTCAGGCCATCGCCTTTATTC AAGATGCTGAAGCCCAGATGGCGCAGCTCTCTATCGAAGCGAATCGCGCCGAATGGATTTACAGTAACTTCATCACCGAA GATACCGCTGCACTTTCGGCCGCAGTCGGTGAAAAAGTCAGTGCCGCGTCGGTAAAATTTGCCACCGAAGCTGCCAAGTA CGCCAATGTGGAACTCGATCCAGCCAATGCGCGCAAACTGAATATTCTGCGCAGCGCACTCGTGTTACCTGCGCCGCTTG ATCCCGCCAAAAATGCTGAGCTGGCGCAAATCAGCTCCGAGCTCAATGGACTCTATGGTAAAGGCAAATACTGTTTCGCC GATGGCAAGTGTATGACCCAGCCAGAGCTGTCGAGCCTGATGGCGGAATCGCGTGACCCAGCCAAACTGCTTGAGGCATG GAAAGGTTGGCGCGAAATTGCAAAACCGATGCGCCCACTATTTCAACGTGAAGTTGAACTCGCCAACGAAGGTGCAAAAG ATCTAGGTTACGCTAACCTCTCTGAGTTATGGCGCAGCCAATACGATATGAAACCCGATGAATTTTCACAGGAGTTAGAT CGTTTATGGGGACAAGTTAAGCCCCTCTATGAATCCCTGCATTGTTACGTTCGCGGCGAGCTGAATAACGAATACGGTGA TGCCATCGCGCCAAAAACCGGCCCTATTCCCGCACACTTACTGGGAAATATGTGGGCGCAGCAATGGGGCAATGTGTACG ATCTCGTCGCCCCTGACGATGCCGATCCTGGCTATGATGTGACGGAATTGCTCGAGCAGAAGGGCTATGATGAACACAAG ATGGTTAAACAGGCCGAAAGCTTTTTCACCTCGTTAGGCTTTGCGCCGCTGCCAGACAGTTTCTGGAGTCGCTCTTTATT CTTGCAACCCAAGGATCGTGATGTCGTTTGTCATGCCTCGGCGTGGGATTTGGATAACCTCGACGATATTCGCATCAAGA TGTGTATCCAGAAAACCGCTGAAGACTTTACCGTTATTCACCACGAGCTTGGACACAACTTCTATCAACGTGCCTATAAA CAGCAGCCTTTCCTGTTTAAAAACAGTGCCAATGATGGTTTCCATGAGGCCATTGGTGACACGATCGCGCTATCTATTAC CCCAAGCTATCTAAAACAGATTGGCTTGCTCGAAGATGTGCCCGATGCTTCTAAGGATATTGGCTTACTGCTGAAACAAG CTTTAGATAAAATCGCCTTCCTGCCCTTTGGTTTGATGATTGACCAGTGGCGCTGGAAAGTCTTTAGCGGTGAAATCACT CCAGCGCAGTATAACCAAGCCTGGTGGGAATTAAGAGAGAAATACCAAGGCGTTAAGGCGCCAACGGATCGCAGCGAAGC CGATTTTGACCCAGGTGCCAAATACCATGTGCCCGGTAACGTGCCTTATACGCGCTACTTCCTCGCACATATTCTGCAAT TCCAGTTCCATAAGGCGCTATGTGATACCGCCGGCGATAAAGGACCTGTACACAGATGCAGTATTTATGGCAATCAAGCC GCTGGGGAAAAACTCAATAAAATGTTAGAGCTGGGTGCAAGCCAACCTTGGCCAGTTGCTTTAAAAGAAGTGACAGGTAC TAAGGGAATGGATGCCAAAGCCGTACTCGATTATTTTGCGCCGCTTAAAACTTGGCTCGATGAGCAAAACACGGCGGCGA ATCGTCAATGTGGTTGGTAA
Upstream 100 bases:
>100_bases CATCCGTTGCAAAAAACAATGAAAAGTCATCAAGTCCTGTGCAAAAAACACTGTGCTTAGGTAGAATGCTTAACACAAAA ACAACAAAGGACTGCAATAC
Downstream 100 bases:
>100_bases TTAAAACCAAGACGAAATGAAGCCTCTAACGTAAGTAACACCTAGGCTCTTAGGTGTGAAAATGTAACCGATAAAAATGC CCAACGATGTTGGGCATTTT
Product: peptidase M2, peptidyl-dipeptidase A
Products: NA
Alternate protein names: Zinc-Dependent Metallopeptidase; Angiotensin-Converting; Dipeptidyl Carboxypeptidase; Angiotensin-Converting Family Protein; Dipeptidyl Carboxydipeptidase Family; Zinc Metallopeptidase Family Protein; Angiotensin-Converting Peptidyl Dipeptidase Protein; Peptidyl-Dipeptidase Dcp; Dipeptidyl Carboxydipeptidase Family Protein
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MAILLNRPTTLALTIALTLGVTACNDAQSKAETTAAPAATNAAPDKAQAIAFIQDAEAQMAQLSIEANRAEWIYSNFITE DTAALSAAVGEKVSAASVKFATEAAKYANVELDPANARKLNILRSALVLPAPLDPAKNAELAQISSELNGLYGKGKYCFA DGKCMTQPELSSLMAESRDPAKLLEAWKGWREIAKPMRPLFQREVELANEGAKDLGYANLSELWRSQYDMKPDEFSQELD RLWGQVKPLYESLHCYVRGELNNEYGDAIAPKTGPIPAHLLGNMWAQQWGNVYDLVAPDDADPGYDVTELLEQKGYDEHK MVKQAESFFTSLGFAPLPDSFWSRSLFLQPKDRDVVCHASAWDLDNLDDIRIKMCIQKTAEDFTVIHHELGHNFYQRAYK QQPFLFKNSANDGFHEAIGDTIALSITPSYLKQIGLLEDVPDASKDIGLLLKQALDKIAFLPFGLMIDQWRWKVFSGEIT PAQYNQAWWELREKYQGVKAPTDRSEADFDPGAKYHVPGNVPYTRYFLAHILQFQFHKALCDTAGDKGPVHRCSIYGNQA AGEKLNKMLELGASQPWPVALKEVTGTKGMDAKAVLDYFAPLKTWLDEQNTAANRQCGW
Sequences:
>Translated_619_residues MAILLNRPTTLALTIALTLGVTACNDAQSKAETTAAPAATNAAPDKAQAIAFIQDAEAQMAQLSIEANRAEWIYSNFITE DTAALSAAVGEKVSAASVKFATEAAKYANVELDPANARKLNILRSALVLPAPLDPAKNAELAQISSELNGLYGKGKYCFA DGKCMTQPELSSLMAESRDPAKLLEAWKGWREIAKPMRPLFQREVELANEGAKDLGYANLSELWRSQYDMKPDEFSQELD RLWGQVKPLYESLHCYVRGELNNEYGDAIAPKTGPIPAHLLGNMWAQQWGNVYDLVAPDDADPGYDVTELLEQKGYDEHK MVKQAESFFTSLGFAPLPDSFWSRSLFLQPKDRDVVCHASAWDLDNLDDIRIKMCIQKTAEDFTVIHHELGHNFYQRAYK QQPFLFKNSANDGFHEAIGDTIALSITPSYLKQIGLLEDVPDASKDIGLLLKQALDKIAFLPFGLMIDQWRWKVFSGEIT PAQYNQAWWELREKYQGVKAPTDRSEADFDPGAKYHVPGNVPYTRYFLAHILQFQFHKALCDTAGDKGPVHRCSIYGNQA AGEKLNKMLELGASQPWPVALKEVTGTKGMDAKAVLDYFAPLKTWLDEQNTAANRQCGW >Mature_618_residues AILLNRPTTLALTIALTLGVTACNDAQSKAETTAAPAATNAAPDKAQAIAFIQDAEAQMAQLSIEANRAEWIYSNFITED TAALSAAVGEKVSAASVKFATEAAKYANVELDPANARKLNILRSALVLPAPLDPAKNAELAQISSELNGLYGKGKYCFAD GKCMTQPELSSLMAESRDPAKLLEAWKGWREIAKPMRPLFQREVELANEGAKDLGYANLSELWRSQYDMKPDEFSQELDR LWGQVKPLYESLHCYVRGELNNEYGDAIAPKTGPIPAHLLGNMWAQQWGNVYDLVAPDDADPGYDVTELLEQKGYDEHKM VKQAESFFTSLGFAPLPDSFWSRSLFLQPKDRDVVCHASAWDLDNLDDIRIKMCIQKTAEDFTVIHHELGHNFYQRAYKQ QPFLFKNSANDGFHEAIGDTIALSITPSYLKQIGLLEDVPDASKDIGLLLKQALDKIAFLPFGLMIDQWRWKVFSGEITP AQYNQAWWELREKYQGVKAPTDRSEADFDPGAKYHVPGNVPYTRYFLAHILQFQFHKALCDTAGDKGPVHRCSIYGNQAA GEKLNKMLELGASQPWPVALKEVTGTKGMDAKAVLDYFAPLKTWLDEQNTAANRQCGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI23238214, Length=598, Percent_Identity=42.3076923076923, Blast_Score=499, Evalue=1e-141, Organism=Homo sapiens, GI4503273, Length=589, Percent_Identity=42.2750424448217, Blast_Score=496, Evalue=1e-140, Organism=Homo sapiens, GI295844837, Length=598, Percent_Identity=38.628762541806, Blast_Score=425, Evalue=1e-119, Organism=Homo sapiens, GI11225609, Length=590, Percent_Identity=38.3050847457627, Blast_Score=409, Evalue=1e-114, Organism=Caenorhabditis elegans, GI71985287, Length=506, Percent_Identity=30.4347826086957, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI24584232, Length=590, Percent_Identity=38.4745762711864, Blast_Score=434, Evalue=1e-122, Organism=Drosophila melanogaster, GI17137008, Length=590, Percent_Identity=38.4745762711864, Blast_Score=434, Evalue=1e-122, Organism=Drosophila melanogaster, GI17137262, Length=469, Percent_Identity=42.8571428571429, Blast_Score=398, Evalue=1e-111, Organism=Drosophila melanogaster, GI85724942, Length=461, Percent_Identity=40.997830802603, Blast_Score=387, Evalue=1e-107, Organism=Drosophila melanogaster, GI22026846, Length=461, Percent_Identity=27.3318872017354, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI28574153, Length=591, Percent_Identity=26.7343485617597, Blast_Score=191, Evalue=2e-48, Organism=Drosophila melanogaster, GI24762773, Length=499, Percent_Identity=27.8557114228457, Blast_Score=187, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68900; Mature: 68768
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILLNRPTTLALTIALTLGVTACNDAQSKAETTAAPAATNAAPDKAQAIAFIQDAEAQM CEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH AQLSIEANRAEWIYSNFITEDTAALSAAVGEKVSAASVKFATEAAKYANVELDPANARKL HHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCHHH NILRSALVLPAPLDPAKNAELAQISSELNGLYGKGKYCFADGKCMTQPELSSLMAESRDP HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCH AKLLEAWKGWREIAKPMRPLFQREVELANEGAKDLGYANLSELWRSQYDMKPDEFSQELD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHH RLWGQVKPLYESLHCYVRGELNNEYGDAIAPKTGPIPAHLLGNMWAQQWGNVYDLVAPDD HHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCC ADPGYDVTELLEQKGYDEHKMVKQAESFFTSLGFAPLPDSFWSRSLFLQPKDRDVVCHAS CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCCCEEEEEC AWDLDNLDDIRIKMCIQKTAEDFTVIHHELGHNFYQRAYKQQPFLFKNSANDGFHEAIGD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCCCCCHHHHCCC TIALSITPSYLKQIGLLEDVPDASKDIGLLLKQALDKIAFLPFGLMIDQWRWKVFSGEIT EEEEEECHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC PAQYNQAWWELREKYQGVKAPTDRSEADFDPGAKYHVPGNVPYTRYFLAHILQFQFHKAL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH CDTAGDKGPVHRCSIYGNQAAGEKLNKMLELGASQPWPVALKEVTGTKGMDAKAVLDYFA HHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHH PLKTWLDEQNTAANRQCGW HHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AILLNRPTTLALTIALTLGVTACNDAQSKAETTAAPAATNAAPDKAQAIAFIQDAEAQM EEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH AQLSIEANRAEWIYSNFITEDTAALSAAVGEKVSAASVKFATEAAKYANVELDPANARKL HHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCHHH NILRSALVLPAPLDPAKNAELAQISSELNGLYGKGKYCFADGKCMTQPELSSLMAESRDP HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCH AKLLEAWKGWREIAKPMRPLFQREVELANEGAKDLGYANLSELWRSQYDMKPDEFSQELD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHH RLWGQVKPLYESLHCYVRGELNNEYGDAIAPKTGPIPAHLLGNMWAQQWGNVYDLVAPDD HHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCC ADPGYDVTELLEQKGYDEHKMVKQAESFFTSLGFAPLPDSFWSRSLFLQPKDRDVVCHAS CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCCCEEEEEC AWDLDNLDDIRIKMCIQKTAEDFTVIHHELGHNFYQRAYKQQPFLFKNSANDGFHEAIGD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCCCCCHHHHCCC TIALSITPSYLKQIGLLEDVPDASKDIGLLLKQALDKIAFLPFGLMIDQWRWKVFSGEIT EEEEEECHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC PAQYNQAWWELREKYQGVKAPTDRSEADFDPGAKYHVPGNVPYTRYFLAHILQFQFHKAL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH CDTAGDKGPVHRCSIYGNQAAGEKLNKMLELGASQPWPVALKEVTGTKGMDAKAVLDYFA HHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHH PLKTWLDEQNTAANRQCGW HHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA