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The map label for this gene is yvrE [H]

Identifier: 117920532

GI number: 117920532

Start: 2505356

End: 2506258

Strand: Direct

Name: yvrE [H]

Synonym: Shewana3_2088

Alternate gene names: 117920532

Gene position: 2505356-2506258 (Clockwise)

Preceding gene: 117920531

Following gene: 117920533

Centisome position: 50.39

GC content: 49.61

Gene sequence:

>903_bases
ATGCAAACGGTCACGGTTGGCGAGCTGTTGATGACAATCCCTGTGGGCAACCGCCTTGGTGAAGGTGTGCTATGGGATGA
TTTACACCAATCTATTTGGTGGACCGACATTTTATCCTCTGTGATTTATCGTTTTCATCTCGCGAGCCGCTCCTTAGAGA
CTTTCCCCATGCCGCACCGCGTCGGCTCCTTTGGCCTCACGGCAAAGCCTACAACACTTATCGTCGCATTCGATATCGGT
ATTGCAATCTATGATATTGAAGATCAAAGCCTGACATGGTTGGCACAGCCAGAATCTCATTTTGCTGGCAATCGCTTTAA
TGATGGTCGCATTGATAGGCAAGGGCGTTTTTGGGCGGGCACTATGGTTGAGCAGCGCGATACTTTGCAACAAACCGCAG
CCCTGTATTGTCTAGATGAGAAAGGGCATTGCCACCAACACCTTACAAATCTCGAAATCTCCAACGGCCTGTGCTGGAGC
GTGGATGGGCGAACGCTCTACCATGCTGATTCGCCAAAACACCAAATCTATCAATATGATTTTGATATTGAGCAGGGGTT
ATTGAGTCGTAAGCGCCTCTTTGCGAGCACGAGCCATCATATTTTCCCTGATGGTTCAGATGTCGATGCGGCGGGTTATC
TCTGGAATGCCCAGTGGGGCGGTGGCCAGGTAGTGCGCTATCGTCCCGATGGTGAAGTCGATCTTATTCTCAAATTGCCA
GTTACCCACCCAACCAGCATTGCTTTTGGCGGCGAAAAGCGTGATTTACTGATAGTCACCAGTGCCAAACACTCACTTGA
CGCATCGCAATTAGACCAAGAGCCGCAAGCAGGCGATGTGTTTATCTACCCATTACAGGGTATTTATGGTGTAAACAGCC
CTCGTTTTTGCGGGCAGCTCTAA

Upstream 100 bases:

>100_bases
AATAGAAAGAAACATTTATCTTTTCCTTTTGCCCTTGCGTCTGCCAACGCCTTGTTTAAGAATAAGGCCATTCTGGGTAA
AAGGACGTCTTGAGTAAATC

Downstream 100 bases:

>100_bases
GTTTAGATCAGCGTTTTTAGCGTAAATCTTGTTATCACAGCCACTCACCAATCCCTTAGACAAAAACGATTTACCGTAAT
TTCAGGTAAAATCACCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MQTVTVGELLMTIPVGNRLGEGVLWDDLHQSIWWTDILSSVIYRFHLASRSLETFPMPHRVGSFGLTAKPTTLIVAFDIG
IAIYDIEDQSLTWLAQPESHFAGNRFNDGRIDRQGRFWAGTMVEQRDTLQQTAALYCLDEKGHCHQHLTNLEISNGLCWS
VDGRTLYHADSPKHQIYQYDFDIEQGLLSRKRLFASTSHHIFPDGSDVDAAGYLWNAQWGGGQVVRYRPDGEVDLILKLP
VTHPTSIAFGGEKRDLLIVTSAKHSLDASQLDQEPQAGDVFIYPLQGIYGVNSPRFCGQL

Sequences:

>Translated_300_residues
MQTVTVGELLMTIPVGNRLGEGVLWDDLHQSIWWTDILSSVIYRFHLASRSLETFPMPHRVGSFGLTAKPTTLIVAFDIG
IAIYDIEDQSLTWLAQPESHFAGNRFNDGRIDRQGRFWAGTMVEQRDTLQQTAALYCLDEKGHCHQHLTNLEISNGLCWS
VDGRTLYHADSPKHQIYQYDFDIEQGLLSRKRLFASTSHHIFPDGSDVDAAGYLWNAQWGGGQVVRYRPDGEVDLILKLP
VTHPTSIAFGGEKRDLLIVTSAKHSLDASQLDQEPQAGDVFIYPLQGIYGVNSPRFCGQL
>Mature_300_residues
MQTVTVGELLMTIPVGNRLGEGVLWDDLHQSIWWTDILSSVIYRFHLASRSLETFPMPHRVGSFGLTAKPTTLIVAFDIG
IAIYDIEDQSLTWLAQPESHFAGNRFNDGRIDRQGRFWAGTMVEQRDTLQQTAALYCLDEKGHCHQHLTNLEISNGLCWS
VDGRTLYHADSPKHQIYQYDFDIEQGLLSRKRLFASTSHHIFPDGSDVDAAGYLWNAQWGGGQVVRYRPDGEVDLILKLP
VTHPTSIAFGGEKRDLLIVTSAKHSLDASQLDQEPQAGDVFIYPLQGIYGVNSPRFCGQL

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=296, Percent_Identity=29.7297297297297, Blast_Score=152, Evalue=4e-37,
Organism=Homo sapiens, GI4759036, Length=296, Percent_Identity=29.7297297297297, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24646912, Length=299, Percent_Identity=30.1003344481605, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24646910, Length=299, Percent_Identity=30.1003344481605, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI45551448, Length=282, Percent_Identity=28.3687943262411, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24641471, Length=299, Percent_Identity=27.7591973244147, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI18860103, Length=299, Percent_Identity=27.7591973244147, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24641469, Length=299, Percent_Identity=27.7591973244147, Blast_Score=116, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 33699; Mature: 33699

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVTVGELLMTIPVGNRLGEGVLWDDLHQSIWWTDILSSVIYRFHLASRSLETFPMPHR
CCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VGSFGLTAKPTTLIVAFDIGIAIYDIEDQSLTWLAQPESHFAGNRFNDGRIDRQGRFWAG
CCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEECCCHHCCCCCCCCCEECCCCCEEEC
TMVEQRDTLQQTAALYCLDEKGHCHQHLTNLEISNGLCWSVDGRTLYHADSPKHQIYQYD
CHHHHHHHHHHHEEEEEECCCCCHHHHHCCEEECCCEEEEECCCEEEECCCCCCEEEEEC
FDIEQGLLSRKRLFASTSHHIFPDGSDVDAAGYLWNAQWGGGQVVRYRPDGEVDLILKLP
CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEC
VTHPTSIAFGGEKRDLLIVTSAKHSLDASQLDQEPQAGDVFIYPLQGIYGVNSPRFCGQL
CCCCCEEEECCCCCEEEEEECCCCCCCHHHHCCCCCCCCEEEEECCCEECCCCCCCCCCC
>Mature Secondary Structure
MQTVTVGELLMTIPVGNRLGEGVLWDDLHQSIWWTDILSSVIYRFHLASRSLETFPMPHR
CCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VGSFGLTAKPTTLIVAFDIGIAIYDIEDQSLTWLAQPESHFAGNRFNDGRIDRQGRFWAG
CCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEECCCHHCCCCCCCCCEECCCCCEEEC
TMVEQRDTLQQTAALYCLDEKGHCHQHLTNLEISNGLCWSVDGRTLYHADSPKHQIYQYD
CHHHHHHHHHHHEEEEEECCCCCHHHHHCCEEECCCEEEEECCCEEEECCCCCCEEEEEC
FDIEQGLLSRKRLFASTSHHIFPDGSDVDAAGYLWNAQWGGGQVVRYRPDGEVDLILKLP
CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEC
VTHPTSIAFGGEKRDLLIVTSAKHSLDASQLDQEPQAGDVFIYPLQGIYGVNSPRFCGQL
CCCCCEEEECCCCCEEEEEECCCCCCCHHHHCCCCCCCCEEEEECCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]