| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920524
Identifier: 117920524
GI number: 117920524
Start: 2489279
End: 2491666
Strand: Reverse
Name: 117920524
Synonym: Shewana3_2080
Alternate gene names: NA
Gene position: 2491666-2489279 (Counterclockwise)
Preceding gene: 117920525
Following gene: 117920513
Centisome position: 50.11
GC content: 50.34
Gene sequence:
>2388_bases ATGAACACTGCCCGATTGTTTGGCCTTTGCCTGTTATTGCCATTAACTTGCCCATTCGTATCCCAGCCAAGCTTTGCTAG TCTTACCCCCATTCCGCTAAACGATGTGCGCCTAACCGCCGGGCCATTTCTGCATGCCCAGCAGACCGATTTGGCTTACA TCATGTCGATGGATCCCGAGCGACTACTCGCCCCTTACCGCAAGGCCGCGGGAATTGCGACCACGGCCGACAACTACCCC AATTGGGAAAATACGGGCCTTGATGGCCATATCGGTGGGCATTATCTATCGGCATTGGCCCTAATGTATGCCGCCACGGG CGATCAGGCGGTGCTTTCGCGCCTCAACTACATGGTGGCCGAGTTGGAAAAGTGTCAACAGGCCCATGGCAATGGTTATG TGGGCGGTGTCCCTCATGGAGACAAACTATGGCAGCAGGTCGCCGCTGGCCATATCGAAGCGGATCTGTTTACGCTCAAC CAATCATGGGTGCCTTGGTATAACGTGCATAAGGTATTCGCGGGCCTGCGGGATGCCTATCTTTATACTCAAAATCCCAC GGCGAAGAAAATGCTCGTCGGTTTTGCCGATTGGATGCTGGATTTAAGTCGCAATCTAAGTGATGAGCAGCTGCAGCTTA TGCTGCGCACCGAATACGGTGGCTTAAATGAAACCTTAGCGGATGTGTACAGCATTACAGGTCAAAACAAATACTTAAAT CTTGCGAATCGCTATACGGATCAAAGCCTGTTACAACCCCTGTTGCAGCATCAAGATAAACTGACGGGCCTACATGCCAA TACACAAATTCCTAAAATTGTCGGTGTGGCACGTATTGCCGAGCTGAGTAATAACAAGGAATGGTTAGAAAGCGCCGATT ATTTTTGGCAGCAAGTAGTTCACCAGCGCACCGTTTCCATCGGTGGCAACAGTGTGCGCGAGTATTTTCATCCCAGCGAA GATTTCAGCAGTATGCTTGACTCGGTAGAAGGCCCTGAGACTTGCAATACCTACAACATGTTGAAGCTGTCAAAATTACT GTATGAAAACAAACGTGATTTACGCTATATCGATTACTACGAGCGTGCACTCTACAACCATATCCTCTCGTCCCAGCATC CGCAAACTGGCGGCCTAGTGTATTTTACGCCAATGCGCCCAGACCATTACCGCGTCTATTCCTCGGCGCAGGAAAGTATG TGGTGTTGTGTCGGCTCAGGCATCGAAAACCATGCTAAATACGGCGAGCTCATCTATGCCGAGGAGGACAACAATCTGTT TGTGAACCTGTTTGTTGATTCTGAGGTCCACTGGAAAGCCAAAGGCATCAGCCTTAGCCAAAAAACTCAGTTCCCCGATG ACAATACTTCGCAGATGATTATCCATCAGGAGGCGGACTTTACCCTCAATCTGCGCTATCCCACATGGGCTAAGGGTGAG GTGACCGTGAGCATTAATGGCGAGCCGCAAAGGTTTACACCGACTCAAGGGCAATATATTCCCTTAACGCGGCACTGGCG CAAGGGCGATAGCGTGACAATCACCTTACCTATGGACATTAGTCTTGAGCAGCTACCGGATAAAAGCGCCTATTACTCAG TGCTTTATGGGCCAATTGTGTTAGCGGCAAAAACGGCGCCTATCGCTAACGAAGCCTTAAACTTTATCGGCGATGCCAGT CGCATGGGGCATATTGCCAGTGGTCCTATGTGCGAACCCAGTCAGGCGCCGATTTTTATTAGCGATGGTACCCGCTTTTT AACCGATATCCGCCGTGAACCCATGAGTCTGCTGCAATTTACCACGGGGAAAGCTCATACAAATCAAGCGAGCCCCATCA CGCTGATCCCCTTCTTTCGCCTGCATGACAGCCGCTATACCTTGTATTTTGGCCAGAGTGCGCCCGATGAATGGCAACAA AAACAGCAAGAGTTAGCTCAAAAAGCCCAGATGGAAGCCAAGCTGATGGCGCAAACCTTAGATAGTGTGCAGCCTGGTGA GCAGCAACCTGAGTCGGATCATTTCTTTAAGGCATCAAGGAGTGAAGCAGGCCTTAATGGTAATCGCCATTGGCGCCATG CCGAGGATTGGTTTAGCTATCAACTCGATGCTAAAGGTGAACCGCGACCCATATTGCGCTTAACCTACTTTGGGCTGGAT GCAGGGCGACGTTTCGACATTTTGATTAACGATAAACGCCTTGCCGAAGTCACTCTGCCTGCCGATAAGGGGCCGATATT TTACAGCGTCGATTACCCTATTCCCGCCGACATGCTGTTGGATAGCACAGTGCCCTTCAGGGTGAAATTTATGGCAAAAC CGGGCTCGATTGCCGGCGGTCTATATGAGGTGCGCCTACTAAAAAGTGAGCCAAGCTCGACTCAGTAA
Upstream 100 bases:
>100_bases TGCGATAACACCATAAGCCCCTACCCAGGGGCTTTTTTATCACGCAAAAACTGAGTTAATCCAAACGTAAAACTCCAATC CGTATAATAAGGGAGCCAAG
Downstream 100 bases:
>100_bases GCGAGCATCCCGAGCGCATGTAGGCACTCGAGCTTAAAACACTGATTCAGATAAGGGAAAGTGAAACGCTTTCCCTTGTT TTTTTATCCCCTTACCCAGA
Product: acetyl-CoA carboxylase, biotin carboxylase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 795; Mature: 795
Protein sequence:
>795_residues MNTARLFGLCLLLPLTCPFVSQPSFASLTPIPLNDVRLTAGPFLHAQQTDLAYIMSMDPERLLAPYRKAAGIATTADNYP NWENTGLDGHIGGHYLSALALMYAATGDQAVLSRLNYMVAELEKCQQAHGNGYVGGVPHGDKLWQQVAAGHIEADLFTLN QSWVPWYNVHKVFAGLRDAYLYTQNPTAKKMLVGFADWMLDLSRNLSDEQLQLMLRTEYGGLNETLADVYSITGQNKYLN LANRYTDQSLLQPLLQHQDKLTGLHANTQIPKIVGVARIAELSNNKEWLESADYFWQQVVHQRTVSIGGNSVREYFHPSE DFSSMLDSVEGPETCNTYNMLKLSKLLYENKRDLRYIDYYERALYNHILSSQHPQTGGLVYFTPMRPDHYRVYSSAQESM WCCVGSGIENHAKYGELIYAEEDNNLFVNLFVDSEVHWKAKGISLSQKTQFPDDNTSQMIIHQEADFTLNLRYPTWAKGE VTVSINGEPQRFTPTQGQYIPLTRHWRKGDSVTITLPMDISLEQLPDKSAYYSVLYGPIVLAAKTAPIANEALNFIGDAS RMGHIASGPMCEPSQAPIFISDGTRFLTDIRREPMSLLQFTTGKAHTNQASPITLIPFFRLHDSRYTLYFGQSAPDEWQQ KQQELAQKAQMEAKLMAQTLDSVQPGEQQPESDHFFKASRSEAGLNGNRHWRHAEDWFSYQLDAKGEPRPILRLTYFGLD AGRRFDILINDKRLAEVTLPADKGPIFYSVDYPIPADMLLDSTVPFRVKFMAKPGSIAGGLYEVRLLKSEPSSTQ
Sequences:
>Translated_795_residues MNTARLFGLCLLLPLTCPFVSQPSFASLTPIPLNDVRLTAGPFLHAQQTDLAYIMSMDPERLLAPYRKAAGIATTADNYP NWENTGLDGHIGGHYLSALALMYAATGDQAVLSRLNYMVAELEKCQQAHGNGYVGGVPHGDKLWQQVAAGHIEADLFTLN QSWVPWYNVHKVFAGLRDAYLYTQNPTAKKMLVGFADWMLDLSRNLSDEQLQLMLRTEYGGLNETLADVYSITGQNKYLN LANRYTDQSLLQPLLQHQDKLTGLHANTQIPKIVGVARIAELSNNKEWLESADYFWQQVVHQRTVSIGGNSVREYFHPSE DFSSMLDSVEGPETCNTYNMLKLSKLLYENKRDLRYIDYYERALYNHILSSQHPQTGGLVYFTPMRPDHYRVYSSAQESM WCCVGSGIENHAKYGELIYAEEDNNLFVNLFVDSEVHWKAKGISLSQKTQFPDDNTSQMIIHQEADFTLNLRYPTWAKGE VTVSINGEPQRFTPTQGQYIPLTRHWRKGDSVTITLPMDISLEQLPDKSAYYSVLYGPIVLAAKTAPIANEALNFIGDAS RMGHIASGPMCEPSQAPIFISDGTRFLTDIRREPMSLLQFTTGKAHTNQASPITLIPFFRLHDSRYTLYFGQSAPDEWQQ KQQELAQKAQMEAKLMAQTLDSVQPGEQQPESDHFFKASRSEAGLNGNRHWRHAEDWFSYQLDAKGEPRPILRLTYFGLD AGRRFDILINDKRLAEVTLPADKGPIFYSVDYPIPADMLLDSTVPFRVKFMAKPGSIAGGLYEVRLLKSEPSSTQ >Mature_795_residues MNTARLFGLCLLLPLTCPFVSQPSFASLTPIPLNDVRLTAGPFLHAQQTDLAYIMSMDPERLLAPYRKAAGIATTADNYP NWENTGLDGHIGGHYLSALALMYAATGDQAVLSRLNYMVAELEKCQQAHGNGYVGGVPHGDKLWQQVAAGHIEADLFTLN QSWVPWYNVHKVFAGLRDAYLYTQNPTAKKMLVGFADWMLDLSRNLSDEQLQLMLRTEYGGLNETLADVYSITGQNKYLN LANRYTDQSLLQPLLQHQDKLTGLHANTQIPKIVGVARIAELSNNKEWLESADYFWQQVVHQRTVSIGGNSVREYFHPSE DFSSMLDSVEGPETCNTYNMLKLSKLLYENKRDLRYIDYYERALYNHILSSQHPQTGGLVYFTPMRPDHYRVYSSAQESM WCCVGSGIENHAKYGELIYAEEDNNLFVNLFVDSEVHWKAKGISLSQKTQFPDDNTSQMIIHQEADFTLNLRYPTWAKGE VTVSINGEPQRFTPTQGQYIPLTRHWRKGDSVTITLPMDISLEQLPDKSAYYSVLYGPIVLAAKTAPIANEALNFIGDAS RMGHIASGPMCEPSQAPIFISDGTRFLTDIRREPMSLLQFTTGKAHTNQASPITLIPFFRLHDSRYTLYFGQSAPDEWQQ KQQELAQKAQMEAKLMAQTLDSVQPGEQQPESDHFFKASRSEAGLNGNRHWRHAEDWFSYQLDAKGEPRPILRLTYFGLD AGRRFDILINDKRLAEVTLPADKGPIFYSVDYPIPADMLLDSTVPFRVKFMAKPGSIAGGLYEVRLLKSEPSSTQ
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89740; Mature: 89740
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTARLFGLCLLLPLTCPFVSQPSFASLTPIPLNDVRLTAGPFLHAQQTDLAYIMSMDPE CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCHH RLLAPYRKAAGIATTADNYPNWENTGLDGHIGGHYLSALALMYAATGDQAVLSRLNYMVA HHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH ELEKCQQAHGNGYVGGVPHGDKLWQQVAAGHIEADLFTLNQSWVPWYNVHKVFAGLRDAY HHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCE LYTQNPTAKKMLVGFADWMLDLSRNLSDEQLQLMLRTEYGGLNETLADVYSITGQNKYLN EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCHHHHHHHHHHCCCCCEEE LANRYTDQSLLQPLLQHQDKLTGLHANTQIPKIVGVARIAELSNNKEWLESADYFWQQVV HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HQRTVSIGGNSVREYFHPSEDFSSMLDSVEGPETCNTYNMLKLSKLLYENKRDLRYIDYY HHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH ERALYNHILSSQHPQTGGLVYFTPMRPDHYRVYSSAQESMWCCVGSGIENHAKYGELIYA HHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHCCCCCEEEEECCCCHHCCCCCCEEEE EEDNNLFVNLFVDSEVHWKAKGISLSQKTQFPDDNTSQMIIHQEADFTLNLRYPTWAKGE ECCCCEEEEEEECCCEEEEECCCCCHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCE VTVSINGEPQRFTPTQGQYIPLTRHWRKGDSVTITLPMDISLEQLPDKSAYYSVLYGPIV EEEEECCCCCCCCCCCCCEECCHHHCCCCCEEEEEEECCCCHHHCCCCHHHHHHHHHCEE LAAKTAPIANEALNFIGDASRMGHIASGPMCEPSQAPIFISDGTRFLTDIRREPMSLLQF EEECCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCHHHHHHC TTGKAHTNQASPITLIPFFRLHDSRYTLYFGQSAPDEWQQKQQELAQKAQMEAKLMAQTL CCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DSVQPGEQQPESDHFFKASRSEAGLNGNRHWRHAEDWFSYQLDAKGEPRPILRLTYFGLD HCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCEEEEEEEECC AGRRFDILINDKRLAEVTLPADKGPIFYSVDYPIPADMLLDSTVPFRVKFMAKPGSIAGG CCCEEEEEECCCEEEEEEECCCCCCEEEEECCCCCHHHHHCCCCCEEEEEEECCCCCCCC LYEVRLLKSEPSSTQ EEEEEEEECCCCCCC >Mature Secondary Structure MNTARLFGLCLLLPLTCPFVSQPSFASLTPIPLNDVRLTAGPFLHAQQTDLAYIMSMDPE CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCHH RLLAPYRKAAGIATTADNYPNWENTGLDGHIGGHYLSALALMYAATGDQAVLSRLNYMVA HHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH ELEKCQQAHGNGYVGGVPHGDKLWQQVAAGHIEADLFTLNQSWVPWYNVHKVFAGLRDAY HHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCE LYTQNPTAKKMLVGFADWMLDLSRNLSDEQLQLMLRTEYGGLNETLADVYSITGQNKYLN EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCHHHHHHHHHHCCCCCEEE LANRYTDQSLLQPLLQHQDKLTGLHANTQIPKIVGVARIAELSNNKEWLESADYFWQQVV HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HQRTVSIGGNSVREYFHPSEDFSSMLDSVEGPETCNTYNMLKLSKLLYENKRDLRYIDYY HHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH ERALYNHILSSQHPQTGGLVYFTPMRPDHYRVYSSAQESMWCCVGSGIENHAKYGELIYA HHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHCCCCCEEEEECCCCHHCCCCCCEEEE EEDNNLFVNLFVDSEVHWKAKGISLSQKTQFPDDNTSQMIIHQEADFTLNLRYPTWAKGE ECCCCEEEEEEECCCEEEEECCCCCHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCE VTVSINGEPQRFTPTQGQYIPLTRHWRKGDSVTITLPMDISLEQLPDKSAYYSVLYGPIV EEEEECCCCCCCCCCCCCEECCHHHCCCCCEEEEEEECCCCHHHCCCCHHHHHHHHHCEE LAAKTAPIANEALNFIGDASRMGHIASGPMCEPSQAPIFISDGTRFLTDIRREPMSLLQF EEECCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCHHHHHHC TTGKAHTNQASPITLIPFFRLHDSRYTLYFGQSAPDEWQQKQQELAQKAQMEAKLMAQTL CCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DSVQPGEQQPESDHFFKASRSEAGLNGNRHWRHAEDWFSYQLDAKGEPRPILRLTYFGLD HCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCEEEEEEEECC AGRRFDILINDKRLAEVTLPADKGPIFYSVDYPIPADMLLDSTVPFRVKFMAKPGSIAGG CCCEEEEEECCCEEEEEEECCCCCCEEEEECCCCCHHHHHCCCCCEEEEEEECCCCCCCC LYEVRLLKSEPSSTQ EEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA