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The map label for this gene is ytfT [H]

Identifier: 117920519

GI number: 117920519

Start: 2483751

End: 2484968

Strand: Direct

Name: ytfT [H]

Synonym: Shewana3_2075

Alternate gene names: 117920519

Gene position: 2483751-2484968 (Clockwise)

Preceding gene: 117920518

Following gene: 117920520

Centisome position: 49.95

GC content: 51.97

Gene sequence:

>1218_bases
ATGAAAAGCTCAGCCGAAACCCTATCATCCACACGCATGTCCGCCGATTTGATCTCACCCCAGATGAACGCATCTGAGGC
GCATTCATCTGAGCGGCAACCGCGGATGCAGGAAAGTCATAAGACCATGGTTCAAGAAAAAAACGCCCGTTACCAAGCGG
GCAAGTCGACCTCCATGGGTCGATATCTCTGGCCACTATTGGCATTAAGTATTCTGTTACTGGCCAATCTGTTTATTGAC
AGCAGTTTCTTCAATATCAGCTATCAAGACGACAGACTCTATGGCTCTTTGATTGATATCTTAAATCGCAGTGCACCCGT
GGCGCTGCTCTCGATTGGTATGAGTCTCGTGATTGCCACTGGCGGAATTGACCTGTCGGTAGGTGCCGTGATGGCGATTG
CGGGCGCGGTTTGCGCGAATCTACTGTTAGTGCCGGATATCAGTTTAGTCACCGTCATTGCAGCAGGCCTTATCGTCGGG
CTCTTAGCTGGCTGTATTAATGGTGGGCTGGTGAGTTTCTTAGGCATTCAACCGATTGTCGCGACCTTGCTGCTCATGGT
GGCGGGGCGCGGTGTCGCTCAGCTTATCAACCAAGGGCAAATTATCACCTTTCAGCACCCAGGCTTTGCCGCCATTGGCG
TGGGCCAGTTTTTAGGCCTGCCGATGCCAGTGTGGATTGTGATTGGGATGCTAACCTTCAGTCAATTACTGCTGCGTAAA
ACCGCTTTAGGGCTTTTTATCGAAGCGGTTGGTTGTAATGCCAAGGCGAGTCGTTACCTTGGGATCAACGATAAATCCAT
CAAACTGTTCGCCTATGGCATTGCGGGTTTGTGCGCGGCATTGGCCGGGATGATCAGCACCGCCGATATCCAAGGCTCGG
ATGCGAATAACGCTGGACTTTGGCTTGAGCTGGATGCCGTGCTGGCCGTAGTCATTGGCGGCGCAGCGCTCACGGGCGGG
CGTTTCTCGTTAATTTTGTCGGTCGTTGGCGCGCTGATCATTCAAACCTTAGCGACCACCATTATCGTCAGTGGTTTACC
CGCTAAGTTTAACTTGCTGATCAAGGCCATCGTTATCCTGACCGTGCTGCTGTTGCAATCGGCTAAATTTAGGCGCCAAT
TGTCGGCGCTGTTCAAATCCAAGCGCCATGCGGATGCCAAACCAGCAGAAAAGGCCACAAGTGCAAAAGCCAGTGCCGCA
ACAGGAGAAAAACTATGA

Upstream 100 bases:

>100_bases
AAATAAAGTCGTGGTATTACGCGACAGATATGCAGTACGTGAACTTTCAGGAGCGGAATTAACCTCGCAACACGTAATGC
AAGCGATTGCGGAGGGATAA

Downstream 100 bases:

>100_bases
TAGCAAGACGTTTTATCCCGCTGTGGATCACCGCCTCATTGCTGCTGACCATGTTTCTGGTTGGCACCTTTCAGTTTGAC
GGTTTTGCCAGTGGCCGAGT

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKSSAETLSSTRMSADLISPQMNASEAHSSERQPRMQESHKTMVQEKNARYQAGKSTSMGRYLWPLLALSILLLANLFID
SSFFNISYQDDRLYGSLIDILNRSAPVALLSIGMSLVIATGGIDLSVGAVMAIAGAVCANLLLVPDISLVTVIAAGLIVG
LLAGCINGGLVSFLGIQPIVATLLLMVAGRGVAQLINQGQIITFQHPGFAAIGVGQFLGLPMPVWIVIGMLTFSQLLLRK
TALGLFIEAVGCNAKASRYLGINDKSIKLFAYGIAGLCAALAGMISTADIQGSDANNAGLWLELDAVLAVVIGGAALTGG
RFSLILSVVGALIIQTLATTIIVSGLPAKFNLLIKAIVILTVLLLQSAKFRRQLSALFKSKRHADAKPAEKATSAKASAA
TGEKL

Sequences:

>Translated_405_residues
MKSSAETLSSTRMSADLISPQMNASEAHSSERQPRMQESHKTMVQEKNARYQAGKSTSMGRYLWPLLALSILLLANLFID
SSFFNISYQDDRLYGSLIDILNRSAPVALLSIGMSLVIATGGIDLSVGAVMAIAGAVCANLLLVPDISLVTVIAAGLIVG
LLAGCINGGLVSFLGIQPIVATLLLMVAGRGVAQLINQGQIITFQHPGFAAIGVGQFLGLPMPVWIVIGMLTFSQLLLRK
TALGLFIEAVGCNAKASRYLGINDKSIKLFAYGIAGLCAALAGMISTADIQGSDANNAGLWLELDAVLAVVIGGAALTGG
RFSLILSVVGALIIQTLATTIIVSGLPAKFNLLIKAIVILTVLLLQSAKFRRQLSALFKSKRHADAKPAEKATSAKASAA
TGEKL
>Mature_405_residues
MKSSAETLSSTRMSADLISPQMNASEAHSSERQPRMQESHKTMVQEKNARYQAGKSTSMGRYLWPLLALSILLLANLFID
SSFFNISYQDDRLYGSLIDILNRSAPVALLSIGMSLVIATGGIDLSVGAVMAIAGAVCANLLLVPDISLVTVIAAGLIVG
LLAGCINGGLVSFLGIQPIVATLLLMVAGRGVAQLINQGQIITFQHPGFAAIGVGQFLGLPMPVWIVIGMLTFSQLLLRK
TALGLFIEAVGCNAKASRYLGINDKSIKLFAYGIAGLCAALAGMISTADIQGSDANNAGLWLELDAVLAVVIGGAALTGG
RFSLILSVVGALIIQTLATTIIVSGLPAKFNLLIKAIVILTVLLLQSAKFRRQLSALFKSKRHADAKPAEKATSAKASAA
TGEKL

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693214, Length=303, Percent_Identity=59.0759075907591, Blast_Score=288, Evalue=4e-79,
Organism=Escherichia coli, GI1790191, Length=308, Percent_Identity=35.0649350649351, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1788896, Length=267, Percent_Identity=31.0861423220974, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787793, Length=318, Percent_Identity=33.0188679245283, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI145693152, Length=262, Percent_Identity=30.5343511450382, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790524, Length=245, Percent_Identity=33.0612244897959, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082395, Length=312, Percent_Identity=29.4871794871795, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1789992, Length=134, Percent_Identity=36.5671641791045, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788471, Length=222, Percent_Identity=29.2792792792793, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 42362; Mature: 42362

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSAETLSSTRMSADLISPQMNASEAHSSERQPRMQESHKTMVQEKNARYQAGKSTSMG
CCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCH
RYLWPLLALSILLLANLFIDSSFFNISYQDDRLYGSLIDILNRSAPVALLSIGMSLVIAT
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEE
GGIDLSVGAVMAIAGAVCANLLLVPDISLVTVIAAGLIVGLLAGCINGGLVSFLGIQPIV
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ATLLLMVAGRGVAQLINQGQIITFQHPGFAAIGVGQFLGLPMPVWIVIGMLTFSQLLLRK
HHHHHHHHCCCHHHHHCCCCEEEEECCCCEEECHHHHHCCCHHHHHHHHHHHHHHHHHHH
TALGLFIEAVGCNAKASRYLGINDKSIKLFAYGIAGLCAALAGMISTADIQGSDANNAGL
HHHHHHHHHHCCCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
WLELDAVLAVVIGGAALTGGRFSLILSVVGALIIQTLATTIIVSGLPAKFNLLIKAIVIL
EEEHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TVLLLQSAKFRRQLSALFKSKRHADAKPAEKATSAKASAATGEKL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKSSAETLSSTRMSADLISPQMNASEAHSSERQPRMQESHKTMVQEKNARYQAGKSTSMG
CCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCH
RYLWPLLALSILLLANLFIDSSFFNISYQDDRLYGSLIDILNRSAPVALLSIGMSLVIAT
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEE
GGIDLSVGAVMAIAGAVCANLLLVPDISLVTVIAAGLIVGLLAGCINGGLVSFLGIQPIV
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ATLLLMVAGRGVAQLINQGQIITFQHPGFAAIGVGQFLGLPMPVWIVIGMLTFSQLLLRK
HHHHHHHHCCCHHHHHCCCCEEEEECCCCEEECHHHHHCCCHHHHHHHHHHHHHHHHHHH
TALGLFIEAVGCNAKASRYLGINDKSIKLFAYGIAGLCAALAGMISTADIQGSDANNAGL
HHHHHHHHHHCCCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
WLELDAVLAVVIGGAALTGGRFSLILSVVGALIIQTLATTIIVSGLPAKFNLLIKAIVIL
EEEHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TVLLLQSAKFRRQLSALFKSKRHADAKPAEKATSAKASAATGEKL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]