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The map label for this gene is ytfQ [H]

Identifier: 117920517

GI number: 117920517

Start: 2481278

End: 2482219

Strand: Direct

Name: ytfQ [H]

Synonym: Shewana3_2073

Alternate gene names: 117920517

Gene position: 2481278-2482219 (Clockwise)

Preceding gene: 117920516

Following gene: 117920518

Centisome position: 49.9

GC content: 50.85

Gene sequence:

>942_bases
ATGAAACATAATAAAATCATTACCGCATTGGGATTATGGGCTGTCAGTGCTACTTGTGCCTACGCCACCACAGTGGGCTT
TTCACAGGTTGGCTCCGAGAGTGGTTGGCGTACCAGCTTTAGCGAAGCGGTCAAGGCCGAAGCTAAACAGCGTGGCATCG
ATTTGAAATTTGCCGACGCTCAGCAAAAACAAGAGAACCAAATCAAAGCCGTGCGCAGCTTTATCGCCCAAGGTGTGGAT
GCCATTATTATTGCGCCCGTGGTAGAAACAGGTTGGAAACCCGTACTGAAAGAAGCCAAACGCGCCAAAATCCCAGTCGT
GATTGTCGACCGTAATATCAAGGTCGATGATGACTCCTTATTCCTTACCCGTATCGCCTCCGACTTTAGCGAAGAAGGCC
GCAAGATTGGCCAATGGCTTATGGATAAAACCCAAGGTAACTGCGATATCGCCGAGTTGCAGGGCACGGTAGGTGCAACC
GCAGCGATTGATCGCGCAGCCGGTTTTAACCAAGTGATTGCCAATTATCCCAATGCCAAGATTGTTCGTAGCCAAACTGG
CGAATTTACCCGTGCTAAGGGTAAAGAAGTGATGGAAGGTTTCCTCAAAGCCCAAAACGGTCAGCCACTGTGCGCCGTGT
GGTCGCATAACGATGAAATGGCCCTCGGCGCCGTGCAAGCCATTAAAGAAGCCGGTTTAAAACCGGGCAAAGATATTCTG
ATTGTCTCCGTGGACGGTGTTCCCGATTACTTTAAGGCGATGGCCGATGGCGATGTCAATGCCACGGTTGAGCTTAGCCC
ATACTTAGGCGGCCCAGCGTTTGATGCTATCGATGCCTACCTGAAGGGCAATAAGGATCAGGCCAAGCTTATTAGCACCA
CGGGTGATGTGTTTACCCAAGAAACCGCTGCCGCAGAGTACGAAAAGCGCCGCCAGCAATAA

Upstream 100 bases:

>100_bases
AATTCAATCAAGGCGAAATAACATTTATTTGTACGAGTTAGTCTGCAGTTAACAGCAGGCTAGGGGATCTCTGTTACCTA
AAATTATAAAGGGAATAATA

Downstream 100 bases:

>100_bases
TCCCATTGACGCTTTCTTGGGGAATAGCGCTATGAGCCTTATTTTAGAACTCAAGCAGATCAGTAAGCATTATCCGGGCG
TCAAAGCCCTTGAGGATGTG

Product: periplasmic binding protein/LacI transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKHNKIITALGLWAVSATCAYATTVGFSQVGSESGWRTSFSEAVKAEAKQRGIDLKFADAQQKQENQIKAVRSFIAQGVD
AIIIAPVVETGWKPVLKEAKRAKIPVVIVDRNIKVDDDSLFLTRIASDFSEEGRKIGQWLMDKTQGNCDIAELQGTVGAT
AAIDRAAGFNQVIANYPNAKIVRSQTGEFTRAKGKEVMEGFLKAQNGQPLCAVWSHNDEMALGAVQAIKEAGLKPGKDIL
IVSVDGVPDYFKAMADGDVNATVELSPYLGGPAFDAIDAYLKGNKDQAKLISTTGDVFTQETAAAEYEKRRQQ

Sequences:

>Translated_313_residues
MKHNKIITALGLWAVSATCAYATTVGFSQVGSESGWRTSFSEAVKAEAKQRGIDLKFADAQQKQENQIKAVRSFIAQGVD
AIIIAPVVETGWKPVLKEAKRAKIPVVIVDRNIKVDDDSLFLTRIASDFSEEGRKIGQWLMDKTQGNCDIAELQGTVGAT
AAIDRAAGFNQVIANYPNAKIVRSQTGEFTRAKGKEVMEGFLKAQNGQPLCAVWSHNDEMALGAVQAIKEAGLKPGKDIL
IVSVDGVPDYFKAMADGDVNATVELSPYLGGPAFDAIDAYLKGNKDQAKLISTTGDVFTQETAAAEYEKRRQQ
>Mature_313_residues
MKHNKIITALGLWAVSATCAYATTVGFSQVGSESGWRTSFSEAVKAEAKQRGIDLKFADAQQKQENQIKAVRSFIAQGVD
AIIIAPVVETGWKPVLKEAKRAKIPVVIVDRNIKVDDDSLFLTRIASDFSEEGRKIGQWLMDKTQGNCDIAELQGTVGAT
AAIDRAAGFNQVIANYPNAKIVRSQTGEFTRAKGKEVMEGFLKAQNGQPLCAVWSHNDEMALGAVQAIKEAGLKPGKDIL
IVSVDGVPDYFKAMADGDVNATVELSPYLGGPAFDAIDAYLKGNKDQAKLISTTGDVFTQETAAAEYEKRRQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=309, Percent_Identity=58.252427184466, Blast_Score=363, Evalue=1e-102,
Organism=Escherichia coli, GI1790192, Length=286, Percent_Identity=31.4685314685315, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1790526, Length=272, Percent_Identity=25.3676470588235, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 33831; Mature: 33831

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHNKIITALGLWAVSATCAYATTVGFSQVGSESGWRTSFSEAVKAEAKQRGIDLKFADA
CCCCCEEHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCH
QQKQENQIKAVRSFIAQGVDAIIIAPVVETGWKPVLKEAKRAKIPVVIVDRNIKVDDDSL
HHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHCCCCEEEECCCEEECCCHH
FLTRIASDFSEEGRKIGQWLMDKTQGNCDIAELQGTVGATAAIDRAAGFNQVIANYPNAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCCHHHHHHCCCCCE
IVRSQTGEFTRAKGKEVMEGFLKAQNGQPLCAVWSHNDEMALGAVQAIKEAGLKPGKDIL
EEECCCCCHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEE
IVSVDGVPDYFKAMADGDVNATVELSPYLGGPAFDAIDAYLKGNKDQAKLISTTGDVFTQ
EEEECCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHEEECCCCHHHH
ETAAAEYEKRRQQ
HHHHHHHHHHHCC
>Mature Secondary Structure
MKHNKIITALGLWAVSATCAYATTVGFSQVGSESGWRTSFSEAVKAEAKQRGIDLKFADA
CCCCCEEHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCH
QQKQENQIKAVRSFIAQGVDAIIIAPVVETGWKPVLKEAKRAKIPVVIVDRNIKVDDDSL
HHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHCCCCEEEECCCEEECCCHH
FLTRIASDFSEEGRKIGQWLMDKTQGNCDIAELQGTVGATAAIDRAAGFNQVIANYPNAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCCHHHHHHCCCCCE
IVRSQTGEFTRAKGKEVMEGFLKAQNGQPLCAVWSHNDEMALGAVQAIKEAGLKPGKDIL
EEECCCCCHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEE
IVSVDGVPDYFKAMADGDVNATVELSPYLGGPAFDAIDAYLKGNKDQAKLISTTGDVFTQ
EEEECCCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHEEECCCCHHHH
ETAAAEYEKRRQQ
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]