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The map label for this gene is cmoA [H]

Identifier: 117920396

GI number: 117920396

Start: 2320234

End: 2320992

Strand: Reverse

Name: cmoA [H]

Synonym: Shewana3_1951

Alternate gene names: 117920396

Gene position: 2320992-2320234 (Counterclockwise)

Preceding gene: 117920408

Following gene: 117920395

Centisome position: 46.68

GC content: 47.69

Gene sequence:

>759_bases
ATGGCTGAATTTTCGAGATATTCCCAGATGAACGCTTCCCAAGATACTATCTACGCTCAAGCGAGCGAACACATTAGCGA
TTTCCAGTTTGATAATCGTGTCGCGGGTGTCTTTAGTGACATGATCCGCCGCTCGGTGCCTGGCTATACGCAAATTATCA
ATACTATTGGCGATTTTGCGGATCGTTTCGTCAAGCCTAATACCCAAGTCTATGATTTAGGTTGCTCTTTAGGCGCAGCC
ACTTTAAGTATTCGCCGTCAAATCCAGGGCCGCGATTGCCGCATTATCGCCGTGGACAATAGCGAATCCATGGTGACGCG
CTGCCAAGAAAACCTCAATGCCTATGTGAGTGATACTGAGGTTGAGCTGATCTGCGGCGATATTCGTGATATTCACATCG
AAAACGCTTCTTTAGTCGTGCTTAACTTTACCCTGCAATTTTTACCGCCAGAGGACAGAGAAGCGCTGATCGCGAAGATT
TATCACGGTTTGAATCCCGGCGGTCTGTTAGTGCTGTCGGAAAAAATTCGCTTCGATGATGCGCCTATTCAAAGTGTGCT
CGAAGAGCTGCACTTAGACTTTAAACGCGCCAATGGCTACAGCGAGCTCGAAATCAGTCAAAAGCGCAGCGCGCTCGAAA
ACGTGATGAAGCCCGATACCTTAACTCTCCACCAGCAACGTTTGACTCGCCAAGGGTTTAGCCACTTTAGCTTGTGGTTC
CAATGTTTTAATTTCTCTTCCATGGTGGCCATCAAGTGA

Upstream 100 bases:

>100_bases
GTACAATGTAAATACTTTGTTATTGATGCATATTAGACAGAAATTTCGGGCAAATTACTAGCCGAGACTTGCTGCTAGTC
AACGGGATTCGTTAAAATGC

Downstream 100 bases:

>100_bases
TCAGTTTCAGCTCCTTTTACCAACAAATTGCCGATTCCAATTTGCAGCATTGGCTCGAGACTTTGCCAGCCATCCTCGGC
AAATGGCAAAGAGAACATAA

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAEFSRYSQMNASQDTIYAQASEHISDFQFDNRVAGVFSDMIRRSVPGYTQIINTIGDFADRFVKPNTQVYDLGCSLGAA
TLSIRRQIQGRDCRIIAVDNSESMVTRCQENLNAYVSDTEVELICGDIRDIHIENASLVVLNFTLQFLPPEDREALIAKI
YHGLNPGGLLVLSEKIRFDDAPIQSVLEELHLDFKRANGYSELEISQKRSALENVMKPDTLTLHQQRLTRQGFSHFSLWF
QCFNFSSMVAIK

Sequences:

>Translated_252_residues
MAEFSRYSQMNASQDTIYAQASEHISDFQFDNRVAGVFSDMIRRSVPGYTQIINTIGDFADRFVKPNTQVYDLGCSLGAA
TLSIRRQIQGRDCRIIAVDNSESMVTRCQENLNAYVSDTEVELICGDIRDIHIENASLVVLNFTLQFLPPEDREALIAKI
YHGLNPGGLLVLSEKIRFDDAPIQSVLEELHLDFKRANGYSELEISQKRSALENVMKPDTLTLHQQRLTRQGFSHFSLWF
QCFNFSSMVAIK
>Mature_251_residues
AEFSRYSQMNASQDTIYAQASEHISDFQFDNRVAGVFSDMIRRSVPGYTQIINTIGDFADRFVKPNTQVYDLGCSLGAAT
LSIRRQIQGRDCRIIAVDNSESMVTRCQENLNAYVSDTEVELICGDIRDIHIENASLVVLNFTLQFLPPEDREALIAKIY
HGLNPGGLLVLSEKIRFDDAPIQSVLEELHLDFKRANGYSELEISQKRSALENVMKPDTLTLHQQRLTRQGFSHFSLWFQ
CFNFSSMVAIK

Specific function: Catalyzes the conversion of 5-methoxyuridine (mo5U) to uridine-5-oxyacetic acid (cmo5U) at position 34 in tRNA. May also participate in the methylation of uridine-5-oxyacetic acid (cmo5U) to uridine-5-oxyacetic acid methyl ester (mcmo5U) [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoA family [H]

Homologues:

Organism=Escherichia coli, GI1788177, Length=239, Percent_Identity=62.3430962343096, Blast_Score=317, Evalue=7e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR005271 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28613; Mature: 28482

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFSRYSQMNASQDTIYAQASEHISDFQFDNRVAGVFSDMIRRSVPGYTQIINTIGDFA
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DRFVKPNTQVYDLGCSLGAATLSIRRQIQGRDCRIIAVDNSESMVTRCQENLNAYVSDTE
HHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCEEECCCE
VELICGDIRDIHIENASLVVLNFTLQFLPPEDREALIAKIYHGLNPGGLLVLSEKIRFDD
EEEEECCCEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCC
APIQSVLEELHLDFKRANGYSELEISQKRSALENVMKPDTLTLHQQRLTRQGFSHFSLWF
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHH
QCFNFSSMVAIK
HHHCCCCEEEEC
>Mature Secondary Structure 
AEFSRYSQMNASQDTIYAQASEHISDFQFDNRVAGVFSDMIRRSVPGYTQIINTIGDFA
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DRFVKPNTQVYDLGCSLGAATLSIRRQIQGRDCRIIAVDNSESMVTRCQENLNAYVSDTE
HHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCEEECCCE
VELICGDIRDIHIENASLVVLNFTLQFLPPEDREALIAKIYHGLNPGGLLVLSEKIRFDD
EEEEECCCEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCC
APIQSVLEELHLDFKRANGYSELEISQKRSALENVMKPDTLTLHQQRLTRQGFSHFSLWF
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHH
QCFNFSSMVAIK
HHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA