| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920376
Identifier: 117920376
GI number: 117920376
Start: 2295393
End: 2297504
Strand: Reverse
Name: 117920376
Synonym: Shewana3_1931
Alternate gene names: NA
Gene position: 2297504-2295393 (Counterclockwise)
Preceding gene: 117920379
Following gene: 117920375
Centisome position: 46.21
GC content: 50.71
Gene sequence:
>2112_bases ATGTTCAGCAATCCTCTTACCCACGTACGCCACATCAACTCGCCAAAACGACATAGCCGCCATTGGGCCGCCAGCCTATT CACGCCTAGCTTGCTAGCACTTAGCATTGGCAGCCTGCTCTGCACCAGTGCTACAGCACAGACCCTCAACCTGAGCTCAC CCGATAAACAAATCGTCTTGAGTCTGAGTGATGATACGGGCCGCCCCGAATACCAAATCCATTTTCATGGCAAATCGATT ATCGAACCGAGCCGCTTAGGGTTAGTCTTTGCCTCATTGGGGGAATTAGGCCAAGGTCTACGTATCAAATCGAGCCACAG CGCCAGCGCCGATGAACAATGGCAGCAACCTTGGGGTGAACAAGAGTGGATAAAGGATCAACACAATCAACTGAGCGTGG TATTAACCGACGGTAAAATCGACTTAAACCTGGAGTTTAAAGCCTTTGACGATGGCATAGGTTTTCGTTATCACTTAGCG GCTCAACACGCCCTCCCGAACAATACGCCGCTTGCCATTACCGATGAACTCACCGAATTTAATATTGGTCAGAGTGATAA GGCCACCGCCTGGTGGATCCCTTCTCGGGGATGGAACCGCTACGAATATCTGTATCGCACCAGTGCGCTCAATCAGGTCG ACAGAGCCCATACTCCTTTTACCTTTAAACTGGTCGATGGCACCCATTTAAGCATTCACGAGGCGGCGTTAGTTGATTTT GCCTCGATGACCCTCGATCAACAGCGCGATGGCAAGCTCAAGGCCGATCTCACCCCTTGGTCAGATGGTATTCGCGTTAA AACCCAAGCGGGCTTTTATACCCCATGGCGCACCATTCAAATCGCCGACAAGGCCACGGGACTGCTTAATTCGCACCTTA TCCTCAACCTGAACGAGCCCAATAAACTGGGGGATGTCTCTTGGGTTAAACCGGGCAAATATGTCGGTATTTGGTGGGGG ATGCACCTCAATGAAAACACTTGGGGCTCGGGCCCAACACACGGCGCAACCACCAGCGAAACAGAGCGCTATATGGATTT CGCCGCCAAGTACCAATTTGATGGTGTCTTGGTTGAGGGTTGGAACCAAGGTTGGGATGGTGATTGGTTCCATAATGGCG ATCAATTCAGTTTTACCAAGGCCTATGATGATTTCGATTTACCCGCCATTACCGCCTACGGCGCGAAAAAAGGCGTACGT CTGATTGGTCATCATGAAACCGCAGGTTCAGTAACCCATTACCGTAATCAAATGGATGATGCCTTCGCCTTGTATGAAAA ACATGGCGTGACCCAAGTCAAAACCGGTTATGTGGCTGACGGTGGACAAATCAAACGCATCGATGAGAACGGTATTACCC GTCACGAATGGCACGATGGTCAGTTTATGGTAGGCGAATATCTGCACAGTGTCACCGAAGCCGCCAAGCACCATATCAGC ATCAACAGCCATGAGCCGATTAAAGATACTGGGCTTCGTCGCACCTATCCGAACTGGCTTGCCCGCGAAGGCGCACGCGG ACAGGAATACAATGCCTGGGGCAGCCCACCAAATAACCCAGAACACACCGCCATGCTGCCCTTTACCCGCATGCTGGCGG GACCAATGGACTTTACACCGGGGATTTTTGACTTAGCTCCCAAGGGCTTAGATGCCGAAAACCGCGTGCAAACCACCTTG ATGAAGCAACTCGCCCTGTATGTGGTGCTCTATAGCCCAATCCAAATGGCTGCCGACTTACCACGCAATTACCAGAAACA TTTGGATGCTTTCCAGTTTATCCGTGATGTGCCAACAGACTGGTATCAAAGTATCGCACTGGCTGGCGAAGTGGGTGATT ATGTCGTGTTTGCCCGCCAAGCCAAGGACCAACAGGATTGGTACTTAGGCGCGCTAACCGATGAAAATACCCGCGAGGTT AAGGTGAAACTGGATTTTCTCGACCCAAACAAACGCTATCAAGCACAGATCTACCGTGATGGTGCAAAAGCCGATTGGAA AACCAATCCCTATGATTATGTGATTGAAACCAAAGAGGTTAATGCTAAGGATAGCCTGACATTACAGCTGGCCAGCAGTG GCGGCACAGCGATCCGCTTTAAAGCGCTGTAA
Upstream 100 bases:
>100_bases CGCTCACTATGGTGAATACGTATGCAAACCATTGCGAGCAAAAACCCATCGCCACTAGTATGCATTGACCCATATTCACT ATAAAAACAAGGATCAGGGA
Downstream 100 bases:
>100_bases ACTCAAGCGCTAAATGGACGCTTAAAGCCCCTCGCGACAGTAACTATTGCTACAGCAATCGAAGTGATAGTGGCCATTAC AATAGTCACCAAGAAGCACT
Product: alpha-glucosidase
Products: NA
Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Esterase; Alpha-Glucosidase-Like Protein; Glycosyl Hydrolase Family; Alpha-Glucosidase SusB; Secreted Protein
Number of amino acids: Translated: 703; Mature: 703
Protein sequence:
>703_residues MFSNPLTHVRHINSPKRHSRHWAASLFTPSLLALSIGSLLCTSATAQTLNLSSPDKQIVLSLSDDTGRPEYQIHFHGKSI IEPSRLGLVFASLGELGQGLRIKSSHSASADEQWQQPWGEQEWIKDQHNQLSVVLTDGKIDLNLEFKAFDDGIGFRYHLA AQHALPNNTPLAITDELTEFNIGQSDKATAWWIPSRGWNRYEYLYRTSALNQVDRAHTPFTFKLVDGTHLSIHEAALVDF ASMTLDQQRDGKLKADLTPWSDGIRVKTQAGFYTPWRTIQIADKATGLLNSHLILNLNEPNKLGDVSWVKPGKYVGIWWG MHLNENTWGSGPTHGATTSETERYMDFAAKYQFDGVLVEGWNQGWDGDWFHNGDQFSFTKAYDDFDLPAITAYGAKKGVR LIGHHETAGSVTHYRNQMDDAFALYEKHGVTQVKTGYVADGGQIKRIDENGITRHEWHDGQFMVGEYLHSVTEAAKHHIS INSHEPIKDTGLRRTYPNWLAREGARGQEYNAWGSPPNNPEHTAMLPFTRMLAGPMDFTPGIFDLAPKGLDAENRVQTTL MKQLALYVVLYSPIQMAADLPRNYQKHLDAFQFIRDVPTDWYQSIALAGEVGDYVVFARQAKDQQDWYLGALTDENTREV KVKLDFLDPNKRYQAQIYRDGAKADWKTNPYDYVIETKEVNAKDSLTLQLASSGGTAIRFKAL
Sequences:
>Translated_703_residues MFSNPLTHVRHINSPKRHSRHWAASLFTPSLLALSIGSLLCTSATAQTLNLSSPDKQIVLSLSDDTGRPEYQIHFHGKSI IEPSRLGLVFASLGELGQGLRIKSSHSASADEQWQQPWGEQEWIKDQHNQLSVVLTDGKIDLNLEFKAFDDGIGFRYHLA AQHALPNNTPLAITDELTEFNIGQSDKATAWWIPSRGWNRYEYLYRTSALNQVDRAHTPFTFKLVDGTHLSIHEAALVDF ASMTLDQQRDGKLKADLTPWSDGIRVKTQAGFYTPWRTIQIADKATGLLNSHLILNLNEPNKLGDVSWVKPGKYVGIWWG MHLNENTWGSGPTHGATTSETERYMDFAAKYQFDGVLVEGWNQGWDGDWFHNGDQFSFTKAYDDFDLPAITAYGAKKGVR LIGHHETAGSVTHYRNQMDDAFALYEKHGVTQVKTGYVADGGQIKRIDENGITRHEWHDGQFMVGEYLHSVTEAAKHHIS INSHEPIKDTGLRRTYPNWLAREGARGQEYNAWGSPPNNPEHTAMLPFTRMLAGPMDFTPGIFDLAPKGLDAENRVQTTL MKQLALYVVLYSPIQMAADLPRNYQKHLDAFQFIRDVPTDWYQSIALAGEVGDYVVFARQAKDQQDWYLGALTDENTREV KVKLDFLDPNKRYQAQIYRDGAKADWKTNPYDYVIETKEVNAKDSLTLQLASSGGTAIRFKAL >Mature_703_residues MFSNPLTHVRHINSPKRHSRHWAASLFTPSLLALSIGSLLCTSATAQTLNLSSPDKQIVLSLSDDTGRPEYQIHFHGKSI IEPSRLGLVFASLGELGQGLRIKSSHSASADEQWQQPWGEQEWIKDQHNQLSVVLTDGKIDLNLEFKAFDDGIGFRYHLA AQHALPNNTPLAITDELTEFNIGQSDKATAWWIPSRGWNRYEYLYRTSALNQVDRAHTPFTFKLVDGTHLSIHEAALVDF ASMTLDQQRDGKLKADLTPWSDGIRVKTQAGFYTPWRTIQIADKATGLLNSHLILNLNEPNKLGDVSWVKPGKYVGIWWG MHLNENTWGSGPTHGATTSETERYMDFAAKYQFDGVLVEGWNQGWDGDWFHNGDQFSFTKAYDDFDLPAITAYGAKKGVR LIGHHETAGSVTHYRNQMDDAFALYEKHGVTQVKTGYVADGGQIKRIDENGITRHEWHDGQFMVGEYLHSVTEAAKHHIS INSHEPIKDTGLRRTYPNWLAREGARGQEYNAWGSPPNNPEHTAMLPFTRMLAGPMDFTPGIFDLAPKGLDAENRVQTTL MKQLALYVVLYSPIQMAADLPRNYQKHLDAFQFIRDVPTDWYQSIALAGEVGDYVVFARQAKDQQDWYLGALTDENTREV KVKLDFLDPNKRYQAQIYRDGAKADWKTNPYDYVIETKEVNAKDSLTLQLASSGGTAIRFKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79340; Mature: 79340
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSNPLTHVRHINSPKRHSRHWAASLFTPSLLALSIGSLLCTSATAQTLNLSSPDKQIVL CCCCCCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEE SLSDDTGRPEYQIHFHGKSIIEPSRLGLVFASLGELGQGLRIKSSHSASADEQWQQPWGE EECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCC QEWIKDQHNQLSVVLTDGKIDLNLEFKAFDDGIGFRYHLAAQHALPNNTPLAITDELTEF HHHHHCCCCEEEEEEECCEEEEEEEEEEECCCCCEEEEEEEHHCCCCCCCEEEECCHHCC NIGQSDKATAWWIPSRGWNRYEYLYRTSALNQVDRAHTPFTFKLVDGTHLSIHEAALVDF CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEHHHHHHHH ASMTLDQQRDGKLKADLTPWSDGIRVKTQAGFYTPWRTIQIADKATGLLNSHLILNLNEP HHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEECCHHCCCCCCEEEEEECCC NKLGDVSWVKPGKYVGIWWGMHLNENTWGSGPTHGATTSETERYMDFAAKYQFDGVLVEG CCCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCEEEEC WNQGWDGDWFHNGDQFSFTKAYDDFDLPAITAYGAKKGVRLIGHHETAGSVTHYRNQMDD CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCHHHHHHHHHH AFALYEKHGVTQVKTGYVADGGQIKRIDENGITRHEWHDGQFMVGEYLHSVTEAAKHHIS HHHHHHHCCCEEEECCEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEE INSHEPIKDTGLRRTYPNWLAREGARGQEYNAWGSPPNNPEHTAMLPFTRMLAGPMDFTP CCCCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCC GIFDLAPKGLDAENRVQTTLMKQLALYVVLYSPIQMAADLPRNYQKHLDAFQFIRDVPTD CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHH WYQSIALAGEVGDYVVFARQAKDQQDWYLGALTDENTREVKVKLDFLDPNKRYQAQIYRD HHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEC GAKADWKTNPYDYVIETKEVNAKDSLTLQLASSGGTAIRFKAL CCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEC >Mature Secondary Structure MFSNPLTHVRHINSPKRHSRHWAASLFTPSLLALSIGSLLCTSATAQTLNLSSPDKQIVL CCCCCCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEE SLSDDTGRPEYQIHFHGKSIIEPSRLGLVFASLGELGQGLRIKSSHSASADEQWQQPWGE EECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCC QEWIKDQHNQLSVVLTDGKIDLNLEFKAFDDGIGFRYHLAAQHALPNNTPLAITDELTEF HHHHHCCCCEEEEEEECCEEEEEEEEEEECCCCCEEEEEEEHHCCCCCCCEEEECCHHCC NIGQSDKATAWWIPSRGWNRYEYLYRTSALNQVDRAHTPFTFKLVDGTHLSIHEAALVDF CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEHHHHHHHH ASMTLDQQRDGKLKADLTPWSDGIRVKTQAGFYTPWRTIQIADKATGLLNSHLILNLNEP HHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEECCHHCCCCCCEEEEEECCC NKLGDVSWVKPGKYVGIWWGMHLNENTWGSGPTHGATTSETERYMDFAAKYQFDGVLVEG CCCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCEEEEC WNQGWDGDWFHNGDQFSFTKAYDDFDLPAITAYGAKKGVRLIGHHETAGSVTHYRNQMDD CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCHHHHHHHHHH AFALYEKHGVTQVKTGYVADGGQIKRIDENGITRHEWHDGQFMVGEYLHSVTEAAKHHIS HHHHHHHCCCEEEECCEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEE INSHEPIKDTGLRRTYPNWLAREGARGQEYNAWGSPPNNPEHTAMLPFTRMLAGPMDFTP CCCCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCC GIFDLAPKGLDAENRVQTTLMKQLALYVVLYSPIQMAADLPRNYQKHLDAFQFIRDVPTD CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHH WYQSIALAGEVGDYVVFARQAKDQQDWYLGALTDENTREVKVKLDFLDPNKRYQAQIYRD HHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEC GAKADWKTNPYDYVIETKEVNAKDSLTLQLASSGGTAIRFKAL CCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA