Click here to switch to the map view.

The map label for this gene is qseC [H]

Identifier: 117920331

GI number: 117920331

Start: 2232915

End: 2234309

Strand: Direct

Name: qseC [H]

Synonym: Shewana3_1886

Alternate gene names: 117920331

Gene position: 2232915-2234309 (Clockwise)

Preceding gene: 117920330

Following gene: 117920332

Centisome position: 44.91

GC content: 49.61

Gene sequence:

>1395_bases
GTGAATCGACTCAAGGTGCTGGATGTGTACTCATTACGTTTGTTATTAACCTTGCTGATGCTCTCGGGGATTTCGGTTTC
CGTGGGTATTTCAAGCTGGTTCAGCACCCGGGATTCTAAGCATCAAATCGAAGAGTTATTTGATGCGCAAATGCTGCAAA
GCGCGAAAATGCTTGAGCTTTTTTATCACGATGAGGCGGAATTTAAAACGCCACAAGAGCTGCCGCAAGTTCTCCATGTC
CCCGATAGCCAGATCAGTACCTTTGCTCAAAAGGCCGATGCATTAAAGCTGGCCTATGAGCACAAACTCGCATTTCAGAT
CTGGAGCGAGGCGGGGCAAGCGCTGGTGTTTTCAGACAATATCGGCCGACAACCCATAACTAAGTTTGTTCAAGGCTATA
GCAAAAAAGTGTTTGAAGGGGAGCTGTGGCATGTGTTCAGTTTTTTTTCGGTCAAACACAAAGTCTGGATAATCACAGCC
CAGCAAGATGAAGTGCGCCAAGAGCTGGTCTCGCAAATTATGCACAATGCCGTAATCGTGCCGCTGATCGTTGTGCCCTT
GACCTTACTTATCGTCAGCTTGCTGTTTTACATCTTGTTCCGGCCGTTGAAGTCCTTCGAGCGCGAGTTAATGGCACGCT
CGCCTAACGATCTCACGCCGCTCACTATGTCACTGCCTAAGGAGCTTGTGCCTGTGCGCCGCGCGCTAAACCAATATATC
AGCAGCATTGCGCACTTTATTGCGAGGGAGCGTCGCTTTAGTGCCGATGCGGCCCATGAGTTAAAAACCCCCTTATCCGT
GATTAAATTACATCAACAGGGGTTAGAAGGTTTAGTGGGCGAGGGTGATGCGGAGCGTATTCACCTTGCCGCTATCGATG
CCGGTGTGAAGCATATGAGTCACACCGTTGAGCAACTTTTGTTGCTTGCGCGGGTCGATTCGATTGCCGAACTCAATGTG
CAACCTCATCTGTTACTGCCAATGGTGGAAGATGCGCTGAATCAGCTAATGCCACTGATCACCGACTATGAATGGCAAAT
CGAGATCGATGCGGCATTAACGCTCAACTGCGATCGGTTTTACCTGCTGATCGTGCTAAAAAACATCATCGAAAATGCCT
GTAAATACAGTCCTGTCGAAACTGAGATTAGTATCAGTGCCGCAGTCACCCACACCCATGTCGAGATAAAGATCGCCGAC
CGCGGGCAGGGCATGACTCTGGAGCAAATCGCCAGTGCGACGGAGCGTTTTTACCGCGTCAATGAAAATGAAGGAATAGG
CGCGGGATTGGGGCTGTCCATCTGCCACCACATCATTGATTTACACCAAGGAGAATTGACGATCACGCCCCGTGAAAATG
GCGGTTTAGTGGTCACGCTTGCGCTTCCCCTGTAA

Upstream 100 bases:

>100_bases
GCGAGAGTCAGGATTTAAGTGACAAACTCGGCGTTTATCGGTATTTAGTAACAGCCTTTTAGGCATGTTTACTCTCACCA
TAAACGACGGGGACTATGGG

Downstream 100 bases:

>100_bases
CTCACATTTCAAATGGTATTTCAACGCGATTCGCAGCCTTAACATAATTATTTTATGCCCGCTGGCTCGCGTATTGGCAG
GCATCATCTAAGATTTGTAG

Product: ATPase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MNRLKVLDVYSLRLLLTLLMLSGISVSVGISSWFSTRDSKHQIEELFDAQMLQSAKMLELFYHDEAEFKTPQELPQVLHV
PDSQISTFAQKADALKLAYEHKLAFQIWSEAGQALVFSDNIGRQPITKFVQGYSKKVFEGELWHVFSFFSVKHKVWIITA
QQDEVRQELVSQIMHNAVIVPLIVVPLTLLIVSLLFYILFRPLKSFERELMARSPNDLTPLTMSLPKELVPVRRALNQYI
SSIAHFIARERRFSADAAHELKTPLSVIKLHQQGLEGLVGEGDAERIHLAAIDAGVKHMSHTVEQLLLLARVDSIAELNV
QPHLLLPMVEDALNQLMPLITDYEWQIEIDAALTLNCDRFYLLIVLKNIIENACKYSPVETEISISAAVTHTHVEIKIAD
RGQGMTLEQIASATERFYRVNENEGIGAGLGLSICHHIIDLHQGELTITPRENGGLVVTLALPL

Sequences:

>Translated_464_residues
MNRLKVLDVYSLRLLLTLLMLSGISVSVGISSWFSTRDSKHQIEELFDAQMLQSAKMLELFYHDEAEFKTPQELPQVLHV
PDSQISTFAQKADALKLAYEHKLAFQIWSEAGQALVFSDNIGRQPITKFVQGYSKKVFEGELWHVFSFFSVKHKVWIITA
QQDEVRQELVSQIMHNAVIVPLIVVPLTLLIVSLLFYILFRPLKSFERELMARSPNDLTPLTMSLPKELVPVRRALNQYI
SSIAHFIARERRFSADAAHELKTPLSVIKLHQQGLEGLVGEGDAERIHLAAIDAGVKHMSHTVEQLLLLARVDSIAELNV
QPHLLLPMVEDALNQLMPLITDYEWQIEIDAALTLNCDRFYLLIVLKNIIENACKYSPVETEISISAAVTHTHVEIKIAD
RGQGMTLEQIASATERFYRVNENEGIGAGLGLSICHHIIDLHQGELTITPRENGGLVVTLALPL
>Mature_464_residues
MNRLKVLDVYSLRLLLTLLMLSGISVSVGISSWFSTRDSKHQIEELFDAQMLQSAKMLELFYHDEAEFKTPQELPQVLHV
PDSQISTFAQKADALKLAYEHKLAFQIWSEAGQALVFSDNIGRQPITKFVQGYSKKVFEGELWHVFSFFSVKHKVWIITA
QQDEVRQELVSQIMHNAVIVPLIVVPLTLLIVSLLFYILFRPLKSFERELMARSPNDLTPLTMSLPKELVPVRRALNQYI
SSIAHFIARERRFSADAAHELKTPLSVIKLHQQGLEGLVGEGDAERIHLAAIDAGVKHMSHTVEQLLLLARVDSIAELNV
QPHLLLPMVEDALNQLMPLITDYEWQIEIDAALTLNCDRFYLLIVLKNIIENACKYSPVETEISISAAVTHTHVEIKIAD
RGQGMTLEQIASATERFYRVNENEGIGAGLGLSICHHIIDLHQGELTITPRENGGLVVTLALPL

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=466, Percent_Identity=28.755364806867, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI1790551, Length=283, Percent_Identity=32.1554770318021, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1788393, Length=253, Percent_Identity=28.8537549407115, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1788279, Length=297, Percent_Identity=27.9461279461279, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=27.3542600896861, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1786912, Length=211, Percent_Identity=31.2796208530806, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790346, Length=254, Percent_Identity=27.5590551181102, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1786783, Length=302, Percent_Identity=24.1721854304636, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789808, Length=307, Percent_Identity=23.4527687296417, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787374, Length=276, Percent_Identity=25.3623188405797, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082128, Length=294, Percent_Identity=26.530612244898, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790436, Length=219, Percent_Identity=27.3972602739726, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 52299; Mature: 52299

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50109 HIS_KIN ; PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLKVLDVYSLRLLLTLLMLSGISVSVGISSWFSTRDSKHQIEELFDAQMLQSAKMLEL
CCCEEEHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FYHDEAEFKTPQELPQVLHVPDSQISTFAQKADALKLAYEHKLAFQIWSEAGQALVFSDN
HCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
IGRQPITKFVQGYSKKVFEGELWHVFSFFSVKHKVWIITAQQDEVRQELVSQIMHNAVIV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHH
PLIVVPLTLLIVSLLFYILFRPLKSFERELMARSPNDLTPLTMSLPKELVPVRRALNQYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHH
SSIAHFIARERRFSADAAHELKTPLSVIKLHQQGLEGLVGEGDAERIHLAAIDAGVKHMS
HHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHH
HTVEQLLLLARVDSIAELNVQPHLLLPMVEDALNQLMPLITDYEWQIEIDAALTLNCDRF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCHH
YLLIVLKNIIENACKYSPVETEISISAAVTHTHVEIKIADRGQGMTLEQIASATERFYRV
HHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHEEC
NENEGIGAGLGLSICHHIIDLHQGELTITPRENGGLVVTLALPL
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCC
>Mature Secondary Structure
MNRLKVLDVYSLRLLLTLLMLSGISVSVGISSWFSTRDSKHQIEELFDAQMLQSAKMLEL
CCCEEEHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FYHDEAEFKTPQELPQVLHVPDSQISTFAQKADALKLAYEHKLAFQIWSEAGQALVFSDN
HCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
IGRQPITKFVQGYSKKVFEGELWHVFSFFSVKHKVWIITAQQDEVRQELVSQIMHNAVIV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHH
PLIVVPLTLLIVSLLFYILFRPLKSFERELMARSPNDLTPLTMSLPKELVPVRRALNQYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHH
SSIAHFIARERRFSADAAHELKTPLSVIKLHQQGLEGLVGEGDAERIHLAAIDAGVKHMS
HHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHH
HTVEQLLLLARVDSIAELNVQPHLLLPMVEDALNQLMPLITDYEWQIEIDAALTLNCDRF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCHH
YLLIVLKNIIENACKYSPVETEISISAAVTHTHVEIKIADRGQGMTLEQIASATERFYRV
HHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHEEC
NENEGIGAGLGLSICHHIIDLHQGELTITPRENGGLVVTLALPL
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]