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The map label for this gene is hydE [H]

Identifier: 117920321

GI number: 117920321

Start: 2222692

End: 2224542

Strand: Reverse

Name: hydE [H]

Synonym: Shewana3_1876

Alternate gene names: 117920321

Gene position: 2224542-2222692 (Counterclockwise)

Preceding gene: 117920322

Following gene: 117920320

Centisome position: 44.74

GC content: 51.11

Gene sequence:

>1851_bases
ATGAAACACATCAGATTTGAGTTTACCTGCTCGCGTCAGGTGCCTTTGTATGCGCATTTATGTAATCAATACCTAAATTA
CGATGCACTCAATATCAGCATCGGCTGCGACAGTCAGCAGGATTTTGGTTCGCACACTTATTTTATTGAGGCCCAAGGCG
AACAAGCACAGCTAGAACAATTAGCCGAGGCGATCGCCGCCGACTTTTTAATTTCAGTCTGGCTGGTCGACTCAGGCATT
CATGCGATTGAGGCGCCGCAGGGACAACGGACATTATTGACCGTCCCATCCACTGAGGGTGCGCTTAACGTGCAATCGGT
CGCGGCTTTTTGCCAGCAGTGTTATCCCAGATTTGGTGATAATCAGGCGGCGCAATTTGGTCAGCTCGATTTAGCCTGCA
CTTGCTGCCACGGTGAAAAGCGCTTAACCAGCGCCCAAAAGGCGTTAACGCTGTCCGATCTCAAGGCGATGGCCGCGCAG
CTTATCAGCCAAGGCTCACTAGATTTAGCCAGCGAAGGCGTGCAATTAAGCCTAACGCCCTTTGCCCATACAACAGCGTC
CAGACCGCAACTGCTTATTTGTAATCCCAATACCCTCAACGCGCATTTTTGCCTGAAGGATAATCAAGTCCTCGCCCTAT
CCAGTATCGAAAAACCGCTGATTAGTGTCAGACCAACCCAAGATAATCAAAAGCTGCCCGCACCACTCTACGATATCTGC
TTTGGTTACAGCCGAGTGGTGTTAGTGCTGAGTGAAATCCTGCGGCAAAAAGGTATCGATTGGGTGTATCTTGAGGGGGC
GCACCAGAGGCCAGCGCTCGCCTGGGTCGATGGCGCTTGGGCTCAGTTAGGCAGCCACACAGCCGAAAACGCAGCGACGC
AGACCATTAAGCAATTCAGTGCGCCGGAGCCTCTGCGGGAAGACATCCACTTTTTAGGCTTTAAGGCCAAATGGCAAGCC
AATAAGAAAACCCGTTCACACCAAGGTTTATTGACTGTGCAGGCCATACCAAGTGAGGCCGAGACAGCTGAATATGCCGC
GAGTGAGGAAGACCATACCATAGCGGATGCAGCCCTGTTTGCAGCGCTGCTTAATGGTAAATTTACGACCCATAAGCAGG
CTAAAAATGCGGCGGTGATTTACTTAAGCCATCACCACACTGGGCAAATCGTTACCTGCGACAATAAGGGAGACACCTCA
CTGTTTTTCGCCCTGCCCGAACTACCGGACAATGGTTACGAGATTTTCCATTGCCTTGACAGCAGTCCACAAAAAGCCGT
CGCGCAAAAATTTAAGAGCTTGTTTCCAGAAGATTACTTAAAGTTGCTGAGCCTAAAACTTAACGGCAGACGTGATAATC
TTCAGAGTCTGTGGGCGATTGCTGCGGTATTGATTGGCCTTAATCCACAGGAAGAAACCCAATCGCAAGCCTATTTGAGC
GATGCACTGCTCGCCGCCGCCATGCGTTACCATGGTGCGAATGCGCCGCGCATCGATTATCCCCTCACCAAAGGCGAGGC
CCACCGCAGCCTGAATTGGTGTAAAACCCTAGGCACTCTGCTGAGTTTTCGCGTTGCAGGGCACAGCGATCCGAGTCAAC
TGGCCTTTGCAATGCAGGACTCCCTCGCCGACTACCTCGCGAATTGGCTGGAACACATTGACTTAAATATCGGTGTACAC
AACATTGCGTTAGCGGGCAATGAGTTAGCCAATGAAACCCTCTGCAAGCGTATTAGCCTACGACTCGGGAAAAACTTCCC
GCTATTGGTCAATCGCAGTCTGGATTTAGAGGGCGACAACCTGGCCGTAGGCGCGCTCTATGTGAAGCAGCGGCAGTTAA
ATAGCCTTTAA

Upstream 100 bases:

>100_bases
TCCCTCGGGTTCACCGCGACACGCATTGCCGAGCATAGTATCGATTCGCTGATCCCCAATTCTTACAAACGTGGCGTCAC
TACTGGTGAAAATATAGAAG

Downstream 100 bases:

>100_bases
CAACACCCGCTCACCGCTAACCTTACATTCAGATAGCGCTAACGCATGGAAGATAAAATGTTTTATCTTCCATGCAGATG
CAGCCAGATAAGCGAAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MKHIRFEFTCSRQVPLYAHLCNQYLNYDALNISIGCDSQQDFGSHTYFIEAQGEQAQLEQLAEAIAADFLISVWLVDSGI
HAIEAPQGQRTLLTVPSTEGALNVQSVAAFCQQCYPRFGDNQAAQFGQLDLACTCCHGEKRLTSAQKALTLSDLKAMAAQ
LISQGSLDLASEGVQLSLTPFAHTTASRPQLLICNPNTLNAHFCLKDNQVLALSSIEKPLISVRPTQDNQKLPAPLYDIC
FGYSRVVLVLSEILRQKGIDWVYLEGAHQRPALAWVDGAWAQLGSHTAENAATQTIKQFSAPEPLREDIHFLGFKAKWQA
NKKTRSHQGLLTVQAIPSEAETAEYAASEEDHTIADAALFAALLNGKFTTHKQAKNAAVIYLSHHHTGQIVTCDNKGDTS
LFFALPELPDNGYEIFHCLDSSPQKAVAQKFKSLFPEDYLKLLSLKLNGRRDNLQSLWAIAAVLIGLNPQEETQSQAYLS
DALLAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTLLSFRVAGHSDPSQLAFAMQDSLADYLANWLEHIDLNIGVH
NIALAGNELANETLCKRISLRLGKNFPLLVNRSLDLEGDNLAVGALYVKQRQLNSL

Sequences:

>Translated_616_residues
MKHIRFEFTCSRQVPLYAHLCNQYLNYDALNISIGCDSQQDFGSHTYFIEAQGEQAQLEQLAEAIAADFLISVWLVDSGI
HAIEAPQGQRTLLTVPSTEGALNVQSVAAFCQQCYPRFGDNQAAQFGQLDLACTCCHGEKRLTSAQKALTLSDLKAMAAQ
LISQGSLDLASEGVQLSLTPFAHTTASRPQLLICNPNTLNAHFCLKDNQVLALSSIEKPLISVRPTQDNQKLPAPLYDIC
FGYSRVVLVLSEILRQKGIDWVYLEGAHQRPALAWVDGAWAQLGSHTAENAATQTIKQFSAPEPLREDIHFLGFKAKWQA
NKKTRSHQGLLTVQAIPSEAETAEYAASEEDHTIADAALFAALLNGKFTTHKQAKNAAVIYLSHHHTGQIVTCDNKGDTS
LFFALPELPDNGYEIFHCLDSSPQKAVAQKFKSLFPEDYLKLLSLKLNGRRDNLQSLWAIAAVLIGLNPQEETQSQAYLS
DALLAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTLLSFRVAGHSDPSQLAFAMQDSLADYLANWLEHIDLNIGVH
NIALAGNELANETLCKRISLRLGKNFPLLVNRSLDLEGDNLAVGALYVKQRQLNSL
>Mature_616_residues
MKHIRFEFTCSRQVPLYAHLCNQYLNYDALNISIGCDSQQDFGSHTYFIEAQGEQAQLEQLAEAIAADFLISVWLVDSGI
HAIEAPQGQRTLLTVPSTEGALNVQSVAAFCQQCYPRFGDNQAAQFGQLDLACTCCHGEKRLTSAQKALTLSDLKAMAAQ
LISQGSLDLASEGVQLSLTPFAHTTASRPQLLICNPNTLNAHFCLKDNQVLALSSIEKPLISVRPTQDNQKLPAPLYDIC
FGYSRVVLVLSEILRQKGIDWVYLEGAHQRPALAWVDGAWAQLGSHTAENAATQTIKQFSAPEPLREDIHFLGFKAKWQA
NKKTRSHQGLLTVQAIPSEAETAEYAASEEDHTIADAALFAALLNGKFTTHKQAKNAAVIYLSHHHTGQIVTCDNKGDTS
LFFALPELPDNGYEIFHCLDSSPQKAVAQKFKSLFPEDYLKLLSLKLNGRRDNLQSLWAIAAVLIGLNPQEETQSQAYLS
DALLAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTLLSFRVAGHSDPSQLAFAMQDSLADYLANWLEHIDLNIGVH
NIALAGNELANETLCKRISLRLGKNFPLLVNRSLDLEGDNLAVGALYVKQRQLNSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67817; Mature: 67817

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIRFEFTCSRQVPLYAHLCNQYLNYDALNISIGCDSQQDFGSHTYFIEAQGEQAQLEQ
CCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHH
LAEAIAADFLISVWLVDSGIHAIEAPQGQRTLLTVPSTEGALNVQSVAAFCQQCYPRFGD
HHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
NQAAQFGQLDLACTCCHGEKRLTSAQKALTLSDLKAMAAQLISQGSLDLASEGVQLSLTP
CCHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEECC
FAHTTASRPQLLICNPNTLNAHFCLKDNQVLALSSIEKPLISVRPTQDNQKLPAPLYDIC
CCCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCHHHHH
FGYSRVVLVLSEILRQKGIDWVYLEGAHQRPALAWVDGAWAQLGSHTAENAATQTIKQFS
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHCC
APEPLREDIHFLGFKAKWQANKKTRSHQGLLTVQAIPSEAETAEYAASEEDHTIADAALF
CCCCHHHHHHHHCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHH
AALLNGKFTTHKQAKNAAVIYLSHHHTGQIVTCDNKGDTSLFFALPELPDNGYEIFHCLD
HHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECC
SSPQKAVAQKFKSLFPEDYLKLLSLKLNGRRDNLQSLWAIAAVLIGLNPQEETQSQAYLS
CCHHHHHHHHHHHHCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
DALLAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTLLSFRVAGHSDPSQLAFAMQD
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
SLADYLANWLEHIDLNIGVHNIALAGNELANETLCKRISLRLGKNFPLLVNRSLDLEGDN
HHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
LAVGALYVKQRQLNSL
EEEEEHEEHHHHHCCC
>Mature Secondary Structure
MKHIRFEFTCSRQVPLYAHLCNQYLNYDALNISIGCDSQQDFGSHTYFIEAQGEQAQLEQ
CCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHH
LAEAIAADFLISVWLVDSGIHAIEAPQGQRTLLTVPSTEGALNVQSVAAFCQQCYPRFGD
HHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
NQAAQFGQLDLACTCCHGEKRLTSAQKALTLSDLKAMAAQLISQGSLDLASEGVQLSLTP
CCHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEECC
FAHTTASRPQLLICNPNTLNAHFCLKDNQVLALSSIEKPLISVRPTQDNQKLPAPLYDIC
CCCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCHHHHH
FGYSRVVLVLSEILRQKGIDWVYLEGAHQRPALAWVDGAWAQLGSHTAENAATQTIKQFS
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHCC
APEPLREDIHFLGFKAKWQANKKTRSHQGLLTVQAIPSEAETAEYAASEEDHTIADAALF
CCCCHHHHHHHHCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHH
AALLNGKFTTHKQAKNAAVIYLSHHHTGQIVTCDNKGDTSLFFALPELPDNGYEIFHCLD
HHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECC
SSPQKAVAQKFKSLFPEDYLKLLSLKLNGRRDNLQSLWAIAAVLIGLNPQEETQSQAYLS
CCHHHHHHHHHHHHCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
DALLAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTLLSFRVAGHSDPSQLAFAMQD
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
SLADYLANWLEHIDLNIGVHNIALAGNELANETLCKRISLRLGKNFPLLVNRSLDLEGDN
HHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
LAVGALYVKQRQLNSL
EEEEEHEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9639603; 14500908; 1587288 [H]