| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117920278
Identifier: 117920278
GI number: 117920278
Start: 2170630
End: 2171913
Strand: Reverse
Name: 117920278
Synonym: Shewana3_1831
Alternate gene names: NA
Gene position: 2171913-2170630 (Counterclockwise)
Preceding gene: 117920279
Following gene: 117920271
Centisome position: 43.68
GC content: 46.73
Gene sequence:
>1284_bases ATGACGCGACAAGATTTGATTTTTATCGGTGATATTCATGGGCAAGACGGAAAACTTCGTGCACTGCTCGAGCATCTCGA TTTTATTGCTGATCCGCTTCAAGAACGTCGCCACCTTGTTTTCATCGGCGATCTGATCGATAACGGCCACGAAGTCGGAA TCGATCATCAAGGGGTTTTAACCTTGGTCAAGGATCTATGCGATCAGGGACTCGCATGTTGCTTGATGGGGAACCATGAA TTTAATGCCGTTGGTTGGGCACTAAAGCACCCAGAGACAGGCTTGCCGCTTCGCCGCCACAATGACAACAACCGCAAACA GCATCAGCGTTTCCTTCAAGATGTGGACGAGGGAAGTGATCTTCATAAAACTTGGATCGACTGGTTTATAAAGCTACCTC TTTTTTATGACTTTGGTCATGTCAGGGCTATTCATGCTTGCTGGCATGAACTGTCTATCCAAAGGATTCTGCCATACCTC AACGAGGATAACAGCTTGAAGATTGAGCATTGGCCTAATGCCTTCGACGAGCGGCACGAGCTATATCATCTATGTGAAAT CTTGCTCAAGGGTCCAGAGTTAGCATTACCGCAGGGTTATAGCTTCCAGGATAACACGGGTACAGAGCGTCACAAAGTCC GAATTAAATGGTGGAGTGAAGAGGCTAAAACCTATAGAGATATAGCCCAAGTACAGCCCAATATGGTCAATCGTATCCCC CCTATTTCACTGGCTGATGAACATTGCAATCAGATAATCGAGACACCAGTTGTTATTGGTCACTACACTCTAGCAGGACT CCCTACACCACTCAGCGGTAAGGTAGTATGTGTCGATTACAACGCGGCCAGTGTACAAGGAGAGCTGGTAGCTTACAGCT GGTGGCATGATGAGACGTCGAATCAGTTGCATGAGCGCAACTTTAGCTACTTAAGCGACATGGAGTTTGGTCAGAAGGGA GTAGCAGAGATGAGGGTGTTATTTGACCAGCTTGCCGATCGCTATAACCCTGTACTATTAAAGTCAGAAAAATGCGAGGA GATTCGTCAGTGTCTGCTGAACCATTGGGATCCAGCCTTCGTCAACGGATTCGATGAGTGCCATGACGAATATGACAACT ATATAACCCCTTTGGCTACTTTGGGTCAACAAGCAAGCTGGGAGGAGTTATCCTGCTATTTGATGGGTATAACCAAAAGC TATTTCAATCAGGAGTTGGAGTCTGACGCTGCAGACCGATTAGCCAAGCGCTTACAGCTGGTGATGAATTCAGAGCTGGA TTGA
Upstream 100 bases:
>100_bases TGAGCTCAACGAGGGCCATTTGTTCAAATGTTATTATCCGGAGTTTATGCACCCTATTCTTTATGGCTCAGTTTTTTCAC AGCTTGATCTCTGGTGAGTT
Downstream 100 bases:
>100_bases GCGCAGAGATACATCAATAACTTCTTAATTAGGGAAATAGATATGACACGATATTTGAAAGTGGGTGATAGTTGCAAAGT GTGTAGTACTCCCCGAGTAG
Product: hypothetical protein
Products: ADP
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Protein Phosphatase; Diadenosine Tetraphosphatase-Like Protein; Phosphatase; Calcineurin-Like Phosphoesterase; Diadenosine Tetraphosphatase; Metallophosphoesterase Protein
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTRQDLIFIGDIHGQDGKLRALLEHLDFIADPLQERRHLVFIGDLIDNGHEVGIDHQGVLTLVKDLCDQGLACCLMGNHE FNAVGWALKHPETGLPLRRHNDNNRKQHQRFLQDVDEGSDLHKTWIDWFIKLPLFYDFGHVRAIHACWHELSIQRILPYL NEDNSLKIEHWPNAFDERHELYHLCEILLKGPELALPQGYSFQDNTGTERHKVRIKWWSEEAKTYRDIAQVQPNMVNRIP PISLADEHCNQIIETPVVIGHYTLAGLPTPLSGKVVCVDYNAASVQGELVAYSWWHDETSNQLHERNFSYLSDMEFGQKG VAEMRVLFDQLADRYNPVLLKSEKCEEIRQCLLNHWDPAFVNGFDECHDEYDNYITPLATLGQQASWEELSCYLMGITKS YFNQELESDAADRLAKRLQLVMNSELD
Sequences:
>Translated_427_residues MTRQDLIFIGDIHGQDGKLRALLEHLDFIADPLQERRHLVFIGDLIDNGHEVGIDHQGVLTLVKDLCDQGLACCLMGNHE FNAVGWALKHPETGLPLRRHNDNNRKQHQRFLQDVDEGSDLHKTWIDWFIKLPLFYDFGHVRAIHACWHELSIQRILPYL NEDNSLKIEHWPNAFDERHELYHLCEILLKGPELALPQGYSFQDNTGTERHKVRIKWWSEEAKTYRDIAQVQPNMVNRIP PISLADEHCNQIIETPVVIGHYTLAGLPTPLSGKVVCVDYNAASVQGELVAYSWWHDETSNQLHERNFSYLSDMEFGQKG VAEMRVLFDQLADRYNPVLLKSEKCEEIRQCLLNHWDPAFVNGFDECHDEYDNYITPLATLGQQASWEELSCYLMGITKS YFNQELESDAADRLAKRLQLVMNSELD >Mature_426_residues TRQDLIFIGDIHGQDGKLRALLEHLDFIADPLQERRHLVFIGDLIDNGHEVGIDHQGVLTLVKDLCDQGLACCLMGNHEF NAVGWALKHPETGLPLRRHNDNNRKQHQRFLQDVDEGSDLHKTWIDWFIKLPLFYDFGHVRAIHACWHELSIQRILPYLN EDNSLKIEHWPNAFDERHELYHLCEILLKGPELALPQGYSFQDNTGTERHKVRIKWWSEEAKTYRDIAQVQPNMVNRIPP ISLADEHCNQIIETPVVIGHYTLAGLPTPLSGKVVCVDYNAASVQGELVAYSWWHDETSNQLHERNFSYLSDMEFGQKGV AEMRVLFDQLADRYNPVLLKSEKCEEIRQCLLNHWDPAFVNGFDECHDEYDNYITPLATLGQQASWEELSCYLMGITKSY FNQELESDAADRLAKRLQLVMNSELD
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.41
Molecular weight: Translated: 49435; Mature: 49304
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQDLIFIGDIHGQDGKLRALLEHLDFIADPLQERRHLVFIGDLIDNGHEVGIDHQGVL CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHH TLVKDLCDQGLACCLMGNHEFNAVGWALKHPETGLPLRRHNDNNRKQHQRFLQDVDEGSD HHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH LHKTWIDWFIKLPLFYDFGHVRAIHACWHELSIQRILPYLNEDNSLKIEHWPNAFDERHE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH LYHLCEILLKGPELALPQGYSFQDNTGTERHKVRIKWWSEEAKTYRDIAQVQPNMVNRIP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCCHHHHCCC PISLADEHCNQIIETPVVIGHYTLAGLPTPLSGKVVCVDYNAASVQGELVAYSWWHDETS CCCCCHHHHHHHHHCCEEEEEEHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCHH NQLHERNFSYLSDMEFGQKGVAEMRVLFDQLADRYNPVLLKSEKCEEIRQCLLNHWDPAF HHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCCHHH VNGFDECHDEYDNYITPLATLGQQASWEELSCYLMGITKSYFNQELESDAADRLAKRLQL HCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMNSELD HHCCCCC >Mature Secondary Structure TRQDLIFIGDIHGQDGKLRALLEHLDFIADPLQERRHLVFIGDLIDNGHEVGIDHQGVL CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHH TLVKDLCDQGLACCLMGNHEFNAVGWALKHPETGLPLRRHNDNNRKQHQRFLQDVDEGSD HHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH LHKTWIDWFIKLPLFYDFGHVRAIHACWHELSIQRILPYLNEDNSLKIEHWPNAFDERHE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH LYHLCEILLKGPELALPQGYSFQDNTGTERHKVRIKWWSEEAKTYRDIAQVQPNMVNRIP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCCHHHHCCC PISLADEHCNQIIETPVVIGHYTLAGLPTPLSGKVVCVDYNAASVQGELVAYSWWHDETS CCCCCHHHHHHHHHCCEEEEEEHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCHH NQLHERNFSYLSDMEFGQKGVAEMRVLFDQLADRYNPVLLKSEKCEEIRQCLLNHWDPAF HHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCCHHH VNGFDECHDEYDNYITPLATLGQQASWEELSCYLMGITKSYFNQELESDAADRLAKRLQL HCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMNSELD HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: P1,P4-bis(5'-adenosyl) tetraphosphate; H2O
Specific reaction: P1,P4-bis(5'-adenosyl) tetraphosphate + H2O = 2 ADP
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA