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The map label for this gene is 117920253

Identifier: 117920253

GI number: 117920253

Start: 2131190

End: 2132206

Strand: Direct

Name: 117920253

Synonym: Shewana3_1806

Alternate gene names: NA

Gene position: 2131190-2132206 (Clockwise)

Preceding gene: 117920252

Following gene: 117920254

Centisome position: 42.86

GC content: 41.4

Gene sequence:

>1017_bases
ATGAACAACAATGTGATAAATAACATAGCGCTAGGTAATTCTGAAGGATTTGGGTTTAATCATGACATTGTTTTAAAGCA
CAGTTTAGTTAATGCGCAACTGAATGGAGCTATCAGTGAAGTCGAATTGGTTCACGAATTTGTAAATCGTGAAACTTGCC
CTATTGAAGCCATATTCTCATTTACGTTACCACTAGATGCGGTCATTTTAGGGTTATCTATGGCGATTGGTGAGCGTCAG
TTCACAGGTGAAGTGACGCCAAAAGCTATCGGAACTGATAAATACGAAGGTGCCATAGCAGAAGGTGACAGTGCAGTATT
ACTGGAGCGGTTGAATGATGGGCTATATTGTCTCAATGTTGGTAATTTGCTACCTAATGATGACGTTACCATTTCTATTC
AATATGCCCAAGTCCTGAACTGGCAAGACCGTAAACTGCGGTTTTATTTTCCGTGTACAATTGGTGACCGCTACGGACAT
CAGCGATCAGCAAATTTACATGATTATCAACAGATTGAGCATACACTAGATAATGGCGCACGCTTAACATTTAATCTGGC
GATTAACGGTGAATTATCTTCCTCATTAGTTACCAGTCCAAGTCATTCATTAACGGTAAAACGAGAAGAGAGTTCTTTAA
TCTTATCAGGGGATAGGGTTATTCCTGATAGGGACATCATAATTACACTAGAAGCATTACCTTCATTTACTGGCGAAATT
CTAGTTGAAAAGAGTGCTTTTGGGTTGCAGTACTGCGCCAACCTGTTATTACCATCCTCAGATAGCCACAATGAGTCAGC
TCAGTGCTTCCAGTTTATTGTTGACCGTTCAGGTTCATGTGCGGAGATGCCATTGAGCAGGTGCGTAAGGCCTTCGTCGC
AATTAAAACACTTCTCAAGCCATCAGACTGGTTCAACATCATCTCCTTTGGGTCTCAAGCACAAAGTTTGTTTCCATCTC
CTGTTCCTGCCGATAGTGAGCATCTTGCAAAACTTCATGCATACATCAACCAGCTAG

Upstream 100 bases:

>100_bases
GTGAGTAGTGAGCAGTTAAGGATGTTAGTTCCTGCAATGGTAAGTAGCTATCAGCAGGTTATGCAGTGCTCTTTGCCTAA
AAATAATGGTGGGGTGGAAA

Downstream 100 bases:

>100_bases
ATGCCAACATGGGGGGAACTGAAATTTCAGCAGCATTAAACTTGGCTCGCAAAACTGGACGGCATGCAGAATTTGCGACG
CAAATGTTGCTGATCACTGA

Product: vault protein inter-alpha-trypsin subunit

Products: NA

Alternate protein names: Vault Protein Inter-Alpha-Trypsin; Inter-Alpha-Trypsin Inhibitor Domain-Containing Protein; Cell Wall Anchor Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin Domain Protein; Von Willebrand Factor Type A; Vault Protein Inter-Alpha-Trypsin Domain-Containing Protein; Von Willebrand Factor Type A Domain-Containing Protein; Von Willebrand Factor Type A Domain Protein; Transmembrane Protein; Vault Protein Inter-Alpha-Trypsin Domain; Von Willebrand Factor

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNNNVINNIALGNSEGFGFNHDIVLKHSLVNAQLNGAISEVELVHEFVNRETCPIEAIFSFTLPLDAVILGLSMAIGERQ
FTGEVTPKAIGTDKYEGAIAEGDSAVLLERLNDGLYCLNVGNLLPNDDVTISIQYAQVLNWQDRKLRFYFPCTIGDRYGH
QRSANLHDYQQIEHTLDNGARLTFNLAINGELSSSLVTSPSHSLTVKREESSLILSGDRVIPDRDIIITLEALPSFTGEI
LVEKSAFGLQYCANLLLPSSDSHNESAQCFQFIVDRSGSCAEMPLSRCVRPSSQLKHFSSHQTGSTSSPLGLKHKVCFHL
LFLPIVSILQNFMHTSTS

Sequences:

>Translated_338_residues
MNNNVINNIALGNSEGFGFNHDIVLKHSLVNAQLNGAISEVELVHEFVNRETCPIEAIFSFTLPLDAVILGLSMAIGERQ
FTGEVTPKAIGTDKYEGAIAEGDSAVLLERLNDGLYCLNVGNLLPNDDVTISIQYAQVLNWQDRKLRFYFPCTIGDRYGH
QRSANLHDYQQIEHTLDNGARLTFNLAINGELSSSLVTSPSHSLTVKREESSLILSGDRVIPDRDIIITLEALPSFTGEI
LVEKSAFGLQYCANLLLPSSDSHNESAQCFQFIVDRSGSCAEMPLSRCVRPSSQLKHFSSHQTGSTSSPLGLKHKVCFHL
LFLPIVSILQNFMHTSTS
>Mature_338_residues
MNNNVINNIALGNSEGFGFNHDIVLKHSLVNAQLNGAISEVELVHEFVNRETCPIEAIFSFTLPLDAVILGLSMAIGERQ
FTGEVTPKAIGTDKYEGAIAEGDSAVLLERLNDGLYCLNVGNLLPNDDVTISIQYAQVLNWQDRKLRFYFPCTIGDRYGH
QRSANLHDYQQIEHTLDNGARLTFNLAINGELSSSLVTSPSHSLTVKREESSLILSGDRVIPDRDIIITLEALPSFTGEI
LVEKSAFGLQYCANLLLPSSDSHNESAQCFQFIVDRSGSCAEMPLSRCVRPSSQLKHFSSHQTGSTSSPLGLKHKVCFHL
LFLPIVSILQNFMHTSTS

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI38195082, Length=306, Percent_Identity=23.8562091503268, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI38195080, Length=306, Percent_Identity=23.8562091503268, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI194306644, Length=306, Percent_Identity=23.8562091503268, Blast_Score=68, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37223; Mature: 37223

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNVINNIALGNSEGFGFNHDIVLKHSLVNAQLNGAISEVELVHEFVNRETCPIEAIFS
CCCCEEEEEEECCCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH
FTLPLDAVILGLSMAIGERQFTGEVTPKAIGTDKYEGAIAEGDSAVLLERLNDGLYCLNV
HHCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEE
GNLLPNDDVTISIQYAQVLNWQDRKLRFYFPCTIGDRYGHQRSANLHDYQQIEHTLDNGA
CCCCCCCCEEEEEEEHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC
RLTFNLAINGELSSSLVTSPSHSLTVKREESSLILSGDRVIPDRDIIITLEALPSFTGEI
EEEEEEEECCCCCCCEECCCCCCEEEEECCCCEEEECCEECCCCCEEEEEECCCCCCCEE
LVEKSAFGLQYCANLLLPSSDSHNESAQCFQFIVDRSGSCAEMPLSRCVRPSSQLKHFSS
EEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCHHHHCCCHHHHHHHHC
HQTGSTSSPLGLKHKVCFHLLFLPIVSILQNFMHTSTS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNNVINNIALGNSEGFGFNHDIVLKHSLVNAQLNGAISEVELVHEFVNRETCPIEAIFS
CCCCEEEEEEECCCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH
FTLPLDAVILGLSMAIGERQFTGEVTPKAIGTDKYEGAIAEGDSAVLLERLNDGLYCLNV
HHCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEE
GNLLPNDDVTISIQYAQVLNWQDRKLRFYFPCTIGDRYGHQRSANLHDYQQIEHTLDNGA
CCCCCCCCEEEEEEEHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC
RLTFNLAINGELSSSLVTSPSHSLTVKREESSLILSGDRVIPDRDIIITLEALPSFTGEI
EEEEEEEECCCCCCCEECCCCCCEEEEECCCCEEEECCEECCCCCEEEEEECCCCCCCEE
LVEKSAFGLQYCANLLLPSSDSHNESAQCFQFIVDRSGSCAEMPLSRCVRPSSQLKHFSS
EEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCHHHHCCCHHHHHHHHC
HQTGSTSSPLGLKHKVCFHLLFLPIVSILQNFMHTSTS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA