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The map label for this gene is ybgI [C]

Identifier: 117920205

GI number: 117920205

Start: 2071684

End: 2072436

Strand: Direct

Name: ybgI [C]

Synonym: Shewana3_1758

Alternate gene names: 117920205

Gene position: 2071684-2072436 (Clockwise)

Preceding gene: 117920204

Following gene: 117920208

Centisome position: 41.67

GC content: 51.66

Gene sequence:

>753_bases
ATGACACGGACAGAACTAACCCAATATTTAGCCGATTTCTTACGCGTATCGGCTTTTAAAGATTACGCCCCGAATGGGTT
ACAGGTTGAAGGGAAAGCAGAGATCCGCACCATAGTGACAGGTGTGACGGCATGCCAAGCGTTAATCGATGAAGCGATTC
GCCTAAAAGCCGATGCGATTTTGGTTCACCATGGCTTTTTCTGGAAGAGTGAACCTGAGGTCATCACCGGCATGAAGCAG
CGCCGGATCAAAGCCTTACTCGCCCATGATATCAACTTATTCGGCTATCACTTGCCCTTAGATGCTCATCCTATGTTGGG
TAACAATGCCACACTTGGCCGCAAACTTGGGATCCTCGATGCCGAAGCGGTTGAAGATGTGGCGCAGGGGTTCGTGTGGC
GTGGCAAACTGGATTTACCCGTCAGTGCCAGTGAATTTGCCGCGACCTTAGGTGAGGTGCTCGGCAGAACGCCACTGCAT
ATTGGAGAAAGTTCGGATGAAATCCAGCACTTAGCTTGGTGTACCGGCGGCGCTCAGGATTATATCGATATTGCCGCAAG
CCTTGGGGTCGATGCGTTTATCAGTGGCGAAGTGTCCGAGCGGACGTTCCACAGCGCGGTGGAGCAGGGTATCCACTATT
ATGCTGCGGGTCACCATGCGACCGAGCGTTTTGGCATTGAGTCGCTTGGGCGTCATCTCGCCCGCGAATTTAATTTAGTA
CACCATTTTGTGGATATCGCTAACCCTGTCTAA

Upstream 100 bases:

>100_bases
GTACCTGCAAGGTGGGGTTCGCGTTGATTTAGCCATGTGATAAAGTGCGAACTTAAGCGTAACTGCCTATAATCAATGAA
AAAATGTAAACGGTGATAGA

Downstream 100 bases:

>100_bases
TGGCGTTGCCTTATCGACATAGAGTAAATGAAAGGCGAGCCATGCTCGCCTTTGTTTTATGTAAATTACCCCTAATTTTA
AATCAGCCTAAGTTTGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTACQALIDEAIRLKADAILVHHGFFWKSEPEVITGMKQ
RRIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILDAEAVEDVAQGFVWRGKLDLPVSASEFAATLGEVLGRTPLH
IGESSDEIQHLAWCTGGAQDYIDIAASLGVDAFISGEVSERTFHSAVEQGIHYYAAGHHATERFGIESLGRHLAREFNLV
HHFVDIANPV

Sequences:

>Translated_250_residues
MTRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTACQALIDEAIRLKADAILVHHGFFWKSEPEVITGMKQ
RRIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILDAEAVEDVAQGFVWRGKLDLPVSASEFAATLGEVLGRTPLH
IGESSDEIQHLAWCTGGAQDYIDIAASLGVDAFISGEVSERTFHSAVEQGIHYYAAGHHATERFGIESLGRHLAREFNLV
HHFVDIANPV
>Mature_249_residues
TRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTACQALIDEAIRLKADAILVHHGFFWKSEPEVITGMKQR
RIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILDAEAVEDVAQGFVWRGKLDLPVSASEFAATLGEVLGRTPLHI
GESSDEIQHLAWCTGGAQDYIDIAASLGVDAFISGEVSERTFHSAVEQGIHYYAAGHHATERFGIESLGRHLAREFNLVH
HFVDIANPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=250, Percent_Identity=57.2, Blast_Score=281, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27433; Mature: 27302

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTACQALIDEAIRLKADAI
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LVHHGFFWKSEPEVITGMKQRRIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILD
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHCCCCC
AEAVEDVAQGFVWRGKLDLPVSASEFAATLGEVLGRTPLHIGESSDEIQHLAWCTGGAQD
HHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHH
YIDIAASLGVDAFISGEVSERTFHSAVEQGIHYYAAGHHATERFGIESLGRHLAREFNLV
HHHHHHHCCCCCEECCCHHHHHHHHHHHHCHHEEECCCHHHHHHCHHHHHHHHHHHHHHH
HHFVDIANPV
HHHHHHCCCC
>Mature Secondary Structure 
TRTELTQYLADFLRVSAFKDYAPNGLQVEGKAEIRTIVTGVTACQALIDEAIRLKADAI
CHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LVHHGFFWKSEPEVITGMKQRRIKALLAHDINLFGYHLPLDAHPMLGNNATLGRKLGILD
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHCCCCC
AEAVEDVAQGFVWRGKLDLPVSASEFAATLGEVLGRTPLHIGESSDEIQHLAWCTGGAQD
HHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHH
YIDIAASLGVDAFISGEVSERTFHSAVEQGIHYYAAGHHATERFGIESLGRHLAREFNLV
HHHHHHHCCCCCEECCCHHHHHHHHHHHHCHHEEECCCHHHHHHCHHHHHHHHHHHHHHH
HHFVDIANPV
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]