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The map label for this gene is ykhA [H]

Identifier: 117920180

GI number: 117920180

Start: 2041544

End: 2041975

Strand: Reverse

Name: ykhA [H]

Synonym: Shewana3_1733

Alternate gene names: 117920180

Gene position: 2041975-2041544 (Counterclockwise)

Preceding gene: 117920181

Following gene: 117920179

Centisome position: 41.07

GC content: 51.85

Gene sequence:

>432_bases
ATGCCAAACTCGCTCGACTCTAGCCGCCCCGCCTTTTCTGACGCCATCGAACAGCGGATCAATCAATCCGAAGCGCGGGT
GATCAAGGCGGTATTCCCGTCTATCACCAATCACCACAACACCTTATTCGGTGGCGAAGCGTTAGCCTGGATGGATGAAA
CCGCCTTTATTGCAGCGACTCGCTTTTGCCGCAAAACCTTAGTGACTGTTAGCTCCGACAGAATCGACTTTAAAAAACCT
ATTCCAGCAGGCACCTTAGCCGAACTCATCGCCCGCGTGATCCATGTGGGTAATACCTCGTTAAAGGTGGAAGTGAATAT
TTTCGTCGAAGACATGTACCAAGATCATCGCGAGCATGCGATCCGCGGCGTATTCACCTTTGTTGCGGTTGACGAACAAC
GCCACCCAACCCAGGTGTGGACCGCTGAATAA

Upstream 100 bases:

>100_bases
TGCAGTCTTAAAACCTAACGATATAGCCGTTTTCTACCATTCAAATTGAAAACTCACTATAATTGCGCCTCTTCAAAAAT
GCATAACCTCAGGTTGCCGT

Downstream 100 bases:

>100_bases
GATTTAGTCAGCCAAGATAACGCACTCTCGCCCTTAAACACGCTCGTTTGAGGGCGTGTTTTTGTTTGAATAATCCGCCC
ACCTTTGATAGACAAAAGTA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPNSLDSSRPAFSDAIEQRINQSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRFCRKTLVTVSSDRIDFKKP
IPAGTLAELIARVIHVGNTSLKVEVNIFVEDMYQDHREHAIRGVFTFVAVDEQRHPTQVWTAE

Sequences:

>Translated_143_residues
MPNSLDSSRPAFSDAIEQRINQSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRFCRKTLVTVSSDRIDFKKP
IPAGTLAELIARVIHVGNTSLKVEVNIFVEDMYQDHREHAIRGVFTFVAVDEQRHPTQVWTAE
>Mature_142_residues
PNSLDSSRPAFSDAIEQRINQSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAATRFCRKTLVTVSSDRIDFKKPI
PAGTLAELIARVIHVGNTSLKVEVNIFVEDMYQDHREHAIRGVFTFVAVDEQRHPTQVWTAE

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 16093; Mature: 15962

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSLDSSRPAFSDAIEQRINQSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAAT
CCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHCHHHHHHHH
RFCRKTLVTVSSDRIDFKKPIPAGTLAELIARVIHVGNTSLKVEVNIFVEDMYQDHREHA
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHH
IRGVFTFVAVDEQRHPTQVWTAE
HHHHHHEEEECCCCCCCEEEECC
>Mature Secondary Structure 
PNSLDSSRPAFSDAIEQRINQSEARVIKAVFPSITNHHNTLFGGEALAWMDETAFIAAT
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEECCCCCHHHHCHHHHHHHH
RFCRKTLVTVSSDRIDFKKPIPAGTLAELIARVIHVGNTSLKVEVNIFVEDMYQDHREHA
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHH
IRGVFTFVAVDEQRHPTQVWTAE
HHHHHHEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377; 10568751 [H]