Click here to switch to the map view.

The map label for this gene is astB [H]

Identifier: 117920175

GI number: 117920175

Start: 2034074

End: 2035408

Strand: Reverse

Name: astB [H]

Synonym: Shewana3_1728

Alternate gene names: 117920175

Gene position: 2035408-2034074 (Counterclockwise)

Preceding gene: 117920177

Following gene: 117920173

Centisome position: 40.94

GC content: 47.04

Gene sequence:

>1335_bases
ATGAAGCACTTTGAAGCGAATTTCGACGGACTCGTTGGGCCAACCCACAATTATGCCGGTTTGTCTTTTGGCAATGTGGC
CTCACTCAACAACGCCGCTTTAGTCTCAAATCCTAAAGCCGCCGCTAAACAGGGTTTGCAAAAAGCCAAAGCACTCGCTG
ATTTAGGGATGATCCAAGGCATGTTAGCGCCACAAGAGCGCCCAGATCTTAATACACTGCGCCGAATTGGTTTTTCTGGC
AGTGATGCCCAAGTTTTACAACAAGCCGCTAAAACCGCGCCTGCGCTGCTTAATGCCTGTTGCAGTGCTTCAAGTATGTG
GACGGCGAATGCCGCAACCGTGTCGCCCAGTGCCGACACCCGTGACGGTAAACTGCATTTTACCCCTGCCAACTTAGTCG
ATAAGTTGCATCGCAGTATCGAGCCCACCACAACGGGGCGCATCTTAACAGCAACTTTCAACGATCCCCACTATTTTCAT
CACCATAATCATTTACCTGAGCATAATAGCTTCGGTGATGAGGGCGCCGCGAATCATACTCGCCTGTGTCAAGAATATGG
TCATGCTGGGGTCGAGCTGTTTGTTTACGGCCAAGAAGCCACCAATCCTAATGCACCAAGACCACAAAAATATCCCGCCA
GACAAACCCTCGAAGCGTCGATGGCGATAGCAAGATTGCACCAACTCGAGGAGGATAACTGCGTCTTTATTCAACAAAAT
CCCGATGTCATTGACCAAGGGGTATTCCACAATGACGTGATCGCCGTGGGTAACCAAAATGTGCTGTTTTACCATGAGCA
GGCATTCTTAAATACACAGGCTAAATTGGATGAAATAAGACGAAAACTCGATACCGAATTATTCTTTATCGAGGTTCCAA
CCACCAAAGTGGCGATTAACAATGCGGTAAAGAGTTATCTATTCAATACCCAAATCATCACTCTCCCCTCTGGCGAAATG
GCCATCATTGCCCCAACAGACTGCCAAGAAAATCCTGCTGTTTATGCATATTTAAATGAGCTACTCACGTTAAATACGCC
AATCAAGCAAGTGCTGTATTTCGATGTGAAACAAAGTATGCAAAACGGTGGCGGCCCCGCCTGCTTGCGTTTACGGGTTG
CCATGAATGAGCGAGAAGTGGCTGCTGCGAATCAACACACTTTACTTAACGATGCTTTATTCGCGCGTTTAAATACTTGG
GTGGATAAACACTACCGCGACCGTTTATCGACTCAAGATTTAGCTGATCCGCAATTAGTGGTTGAATCACGCACCGCATT
AGATGAGCTCACCCAAATCATGAAATTGGGAAGTGTGTATCCATTCCAAAGATAA

Upstream 100 bases:

>100_bases
ACAAAACCGTGCGCTTGTGCCCACAAAAACCTTCAGTATACTGGGTCGCTTCAGGGACCATTTGAATAAATAATAACCTT
CCCTATCACAAGGATAAGCA

Downstream 100 bases:

>100_bases
ACCTCTATCTAACCACGCTAAACCACAAAAATTAAAGGCGATGCTCTGATCGCCTTTAATACTGTTAAGTGAATATTAAG
CAGGCTGATTAACCACCATC

Product: succinylarginine dihydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAALVSNPKAAAKQGLQKAKALADLGMIQGMLAPQERPDLNTLRRIGFSG
SDAQVLQQAAKTAPALLNACCSASSMWTANAATVSPSADTRDGKLHFTPANLVDKLHRSIEPTTTGRILTATFNDPHYFH
HHNHLPEHNSFGDEGAANHTRLCQEYGHAGVELFVYGQEATNPNAPRPQKYPARQTLEASMAIARLHQLEEDNCVFIQQN
PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLDEIRRKLDTELFFIEVPTTKVAINNAVKSYLFNTQIITLPSGEM
AIIAPTDCQENPAVYAYLNELLTLNTPIKQVLYFDVKQSMQNGGGPACLRLRVAMNEREVAAANQHTLLNDALFARLNTW
VDKHYRDRLSTQDLADPQLVVESRTALDELTQIMKLGSVYPFQR

Sequences:

>Translated_444_residues
MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAALVSNPKAAAKQGLQKAKALADLGMIQGMLAPQERPDLNTLRRIGFSG
SDAQVLQQAAKTAPALLNACCSASSMWTANAATVSPSADTRDGKLHFTPANLVDKLHRSIEPTTTGRILTATFNDPHYFH
HHNHLPEHNSFGDEGAANHTRLCQEYGHAGVELFVYGQEATNPNAPRPQKYPARQTLEASMAIARLHQLEEDNCVFIQQN
PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLDEIRRKLDTELFFIEVPTTKVAINNAVKSYLFNTQIITLPSGEM
AIIAPTDCQENPAVYAYLNELLTLNTPIKQVLYFDVKQSMQNGGGPACLRLRVAMNEREVAAANQHTLLNDALFARLNTW
VDKHYRDRLSTQDLADPQLVVESRTALDELTQIMKLGSVYPFQR
>Mature_444_residues
MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAALVSNPKAAAKQGLQKAKALADLGMIQGMLAPQERPDLNTLRRIGFSG
SDAQVLQQAAKTAPALLNACCSASSMWTANAATVSPSADTRDGKLHFTPANLVDKLHRSIEPTTTGRILTATFNDPHYFH
HHNHLPEHNSFGDEGAANHTRLCQEYGHAGVELFVYGQEATNPNAPRPQKYPARQTLEASMAIARLHQLEEDNCVFIQQN
PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLDEIRRKLDTELFFIEVPTTKVAINNAVKSYLFNTQIITLPSGEM
AIIAPTDCQENPAVYAYLNELLTLNTPIKQVLYFDVKQSMQNGGGPACLRLRVAMNEREVAAANQHTLLNDALFARLNTW
VDKHYRDRLSTQDLADPQLVVESRTALDELTQIMKLGSVYPFQR

Specific function: Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) [H]

COG id: COG3724

COG function: function code E; Succinylarginine dihydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the succinylarginine dihydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1788041, Length=444, Percent_Identity=55.1801801801802, Blast_Score=499, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007079 [H]

Pfam domain/function: PF04996 AstB [H]

EC number: =3.5.3.23 [H]

Molecular weight: Translated: 49068; Mature: 49068

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAALVSNPKAAAKQGLQKAKALADLGMIQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
MLAPQERPDLNTLRRIGFSGSDAQVLQQAAKTAPALLNACCSASSMWTANAATVSPSADT
HCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCC
RDGKLHFTPANLVDKLHRSIEPTTTGRILTATFNDPHYFHHHNHLPEHNSFGDEGAANHT
CCCEEEECHHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCHHH
RLCQEYGHAGVELFVYGQEATNPNAPRPQKYPARQTLEASMAIARLHQLEEDNCVFIQQN
HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLDEIRRKLDTELFFIEVPTTKVAIN
CCHHHCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHH
NAVKSYLFNTQIITLPSGEMAIIAPTDCQENPAVYAYLNELLTLNTPIKQVLYFDVKQSM
HHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
QNGGGPACLRLRVAMNEREVAAANQHTLLNDALFARLNTWVDKHYRDRLSTQDLADPQLV
HCCCCCEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VESRTALDELTQIMKLGSVYPFQR
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAALVSNPKAAAKQGLQKAKALADLGMIQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
MLAPQERPDLNTLRRIGFSGSDAQVLQQAAKTAPALLNACCSASSMWTANAATVSPSADT
HCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCC
RDGKLHFTPANLVDKLHRSIEPTTTGRILTATFNDPHYFHHHNHLPEHNSFGDEGAANHT
CCCEEEECHHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCHHH
RLCQEYGHAGVELFVYGQEATNPNAPRPQKYPARQTLEASMAIARLHQLEEDNCVFIQQN
HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
PDVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLDEIRRKLDTELFFIEVPTTKVAIN
CCHHHCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHH
NAVKSYLFNTQIITLPSGEMAIIAPTDCQENPAVYAYLNELLTLNTPIKQVLYFDVKQSM
HHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
QNGGGPACLRLRVAMNEREVAAANQHTLLNDALFARLNTWVDKHYRDRLSTQDLADPQLV
HCCCCCEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VESRTALDELTQIMKLGSVYPFQR
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA