| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is gltT [H]
Identifier: 117920173
GI number: 117920173
Start: 2028777
End: 2030090
Strand: Reverse
Name: gltT [H]
Synonym: Shewana3_1726
Alternate gene names: 117920173
Gene position: 2030090-2028777 (Counterclockwise)
Preceding gene: 117920175
Following gene: 117920172
Centisome position: 40.83
GC content: 45.05
Gene sequence:
>1314_bases ATGGCAACCTTATTACAAAAGAAATTCGGCCTTACAAGCAAAATTCTGTTCGGTATGGCAACAGGTATTGCTTTAGGTCT CATACTCCGCAACGTCTTTCCAGAAAGCGATATCGTAAAAGACTATATTACTGAAGGTTTCTTACATGTTATCGGCACTA TCTTTATCTCAAGTTTGAAAATGCTAGTGGTTCCACTGGTATTTATTTCATTAGTTTGTGGCACTTGCTCACTGAGTGAA CCTTCAAAATTAGGTCGTTTAGGCGGCAAAACATTAGCCTTTTATTTATTCACAACAGCGATTGCTTTAATTCTCGCCAT TGTCAGCGCGGTATTAGTTCATCCAGGTAATGCTTCGCTCGCTTCCGAAAAAATGGAGTACACAGCCAAAGAAGCGCCTA GTCTTTCGAGCGTCCTAATCAATATAGTGCCAACGAATCCGATGCAAGCCATGAGCGAAGGCAATATGCTGCAGATTATT ATCTTTGCGGTGATTTTTGGCTTTGCGATTGCGCATATTGGCGAACGTGGGAAACGTGTTGCCGCGTTATTTGAAGATTT AAATGAAGTGATCATGCGGGTCGTTACGCTGATCATGCAGCTTGCGCCTTACGGGGTGTTTGCACTGATGGCAAAACTGG CTTTAACGCTAGGTTTGGGAACATTCGAAAGTGTGGTCAAGTATTTCTTTGTCGTGTTGGTGGTGTTACTCATCCACGCC TTTATCGTCTACCCGACCCTGCTTAAGTTATTCTCAGGCTTAAATCCGCTGATCTTTATTCGTAAGATGCGTGATGTGCA GTTGTTTGCCTTTTCAACCGCAAGCTCAAACGCCACCTTACCGATTACGATTGAGGCGTCTGAGCACAGACTCGGTGTTG ATAATAAAATTGCCTCTTTCACCCTGCCATTAGGTGCCACCATTAACATGGATGGCACGGCGATTATGCAAGGTGTCGCT ACTGTATTTATCGCCCAAGTCTTTGGTATTGAGTTAACCATTACCGATTATGCTGCCGTTGTTGTCACCGCGACCTTAGC GTCAATCGGTACTGCTGGGGTTCCGGGCGTAGGCTTGATCATGTTAGCTATGGTGCTTAACCAAGTTGGTCTGCCCGTTG AAGGTATTGCCCTCATTATCGGGGTTGACCGACTGCTGGATATGGTGCGCACCGCGGTTAACGTAACAGGCGATTGCGTC GCGACTGTGGTGATTGCCAAATCTGAAGGCGAATTTAACGAAACCGTATTCAACAATACTCAAGCCGGTAAAGTCGCCAG TAACTTCGATGAACAAGTGCATAAAGTAGAGTAA
Upstream 100 bases:
>100_bases GCAGTCAGTTTAACATCGGAACTCATTTAAACTTCTGCATTTTCTTGCTAGGCTTGTCGTCGCCAATATTAGAATGTATA AAAAACACACAGGAATCCCC
Downstream 100 bases:
>100_bases TCCTCACTTTCGAATGCATCTATATCTACTAAAAAGCCCAACTCAGTTGGGCTTTTTTATTTGTCTTATCCTAATTTTGT GAACAAGCAAATAGAATAGT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MATLLQKKFGLTSKILFGMATGIALGLILRNVFPESDIVKDYITEGFLHVIGTIFISSLKMLVVPLVFISLVCGTCSLSE PSKLGRLGGKTLAFYLFTTAIALILAIVSAVLVHPGNASLASEKMEYTAKEAPSLSSVLINIVPTNPMQAMSEGNMLQII IFAVIFGFAIAHIGERGKRVAALFEDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGLGTFESVVKYFFVVLVVLLIHA FIVYPTLLKLFSGLNPLIFIRKMRDVQLFAFSTASSNATLPITIEASEHRLGVDNKIASFTLPLGATINMDGTAIMQGVA TVFIAQVFGIELTITDYAAVVVTATLASIGTAGVPGVGLIMLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDCV ATVVIAKSEGEFNETVFNNTQAGKVASNFDEQVHKVE
Sequences:
>Translated_437_residues MATLLQKKFGLTSKILFGMATGIALGLILRNVFPESDIVKDYITEGFLHVIGTIFISSLKMLVVPLVFISLVCGTCSLSE PSKLGRLGGKTLAFYLFTTAIALILAIVSAVLVHPGNASLASEKMEYTAKEAPSLSSVLINIVPTNPMQAMSEGNMLQII IFAVIFGFAIAHIGERGKRVAALFEDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGLGTFESVVKYFFVVLVVLLIHA FIVYPTLLKLFSGLNPLIFIRKMRDVQLFAFSTASSNATLPITIEASEHRLGVDNKIASFTLPLGATINMDGTAIMQGVA TVFIAQVFGIELTITDYAAVVVTATLASIGTAGVPGVGLIMLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDCV ATVVIAKSEGEFNETVFNNTQAGKVASNFDEQVHKVE >Mature_436_residues ATLLQKKFGLTSKILFGMATGIALGLILRNVFPESDIVKDYITEGFLHVIGTIFISSLKMLVVPLVFISLVCGTCSLSEP SKLGRLGGKTLAFYLFTTAIALILAIVSAVLVHPGNASLASEKMEYTAKEAPSLSSVLINIVPTNPMQAMSEGNMLQIII FAVIFGFAIAHIGERGKRVAALFEDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGLGTFESVVKYFFVVLVVLLIHAF IVYPTLLKLFSGLNPLIFIRKMRDVQLFAFSTASSNATLPITIEASEHRLGVDNKIASFTLPLGATINMDGTAIMQGVAT VFIAQVFGIELTITDYAAVVVTATLASIGTAGVPGVGLIMLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDCVA TVVIAKSEGEFNETVFNNTQAGKVASNFDEQVHKVE
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI169790839, Length=413, Percent_Identity=35.1089588377724, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI40254478, Length=492, Percent_Identity=31.0975609756098, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI4827012, Length=294, Percent_Identity=40.4761904761905, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI21314632, Length=449, Percent_Identity=31.8485523385301, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI66773030, Length=404, Percent_Identity=33.6633663366337, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI5032093, Length=371, Percent_Identity=37.7358490566038, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI194239697, Length=259, Percent_Identity=39.3822393822394, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI223468566, Length=255, Percent_Identity=39.6078431372549, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI223468564, Length=246, Percent_Identity=39.8373983739837, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI262359914, Length=341, Percent_Identity=33.1378299120235, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI301601644, Length=164, Percent_Identity=41.4634146341463, Blast_Score=118, Evalue=1e-26, Organism=Escherichia coli, GI1790514, Length=439, Percent_Identity=36.2186788154898, Blast_Score=253, Evalue=1e-68, Organism=Escherichia coli, GI1789947, Length=425, Percent_Identity=30.8235294117647, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1788024, Length=455, Percent_Identity=30.989010989011, Blast_Score=168, Evalue=6e-43, Organism=Escherichia coli, GI1789473, Length=376, Percent_Identity=28.1914893617021, Blast_Score=121, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71983099, Length=434, Percent_Identity=33.1797235023041, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71983106, Length=434, Percent_Identity=33.1797235023041, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17537407, Length=466, Percent_Identity=34.549356223176, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI193206505, Length=431, Percent_Identity=34.5707656612529, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71996953, Length=461, Percent_Identity=32.7548806941432, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI193206654, Length=432, Percent_Identity=31.4814814814815, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17541374, Length=392, Percent_Identity=32.1428571428571, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI24583025, Length=435, Percent_Identity=32.4137931034483, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI17137668, Length=435, Percent_Identity=32.4137931034483, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24583023, Length=435, Percent_Identity=32.4137931034483, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI281360481, Length=452, Percent_Identity=31.1946902654867, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI281360483, Length=452, Percent_Identity=31.1946902654867, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI17137666, Length=452, Percent_Identity=31.1946902654867, Blast_Score=152, Evalue=5e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 46637; Mature: 46506
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLLQKKFGLTSKILFGMATGIALGLILRNVFPESDIVKDYITEGFLHVIGTIFISSLK CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH MLVVPLVFISLVCGTCSLSEPSKLGRLGGKTLAFYLFTTAIALILAIVSAVLVHPGNASL HHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ASEKMEYTAKEAPSLSSVLINIVPTNPMQAMSEGNMLQIIIFAVIFGFAIAHIGERGKRV HHHHHHHHHHCCCCHHHHHEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AALFEDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGLGTFESVVKYFFVVLVVLLIHA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FIVYPTLLKLFSGLNPLIFIRKMRDVQLFAFSTASSNATLPITIEASEHRLGVDNKIASF HHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHEE TLPLGATINMDGTAIMQGVATVFIAQVFGIELTITDYAAVVVTATLASIGTAGVPGVGLI EECCCCEECCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHH MLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDCVATVVIAKSEGEFNETVFNNT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCHHHHHCCC QAGKVASNFDEQVHKVE CCCHHHHHHHHHHHCCC >Mature Secondary Structure ATLLQKKFGLTSKILFGMATGIALGLILRNVFPESDIVKDYITEGFLHVIGTIFISSLK CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH MLVVPLVFISLVCGTCSLSEPSKLGRLGGKTLAFYLFTTAIALILAIVSAVLVHPGNASL HHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ASEKMEYTAKEAPSLSSVLINIVPTNPMQAMSEGNMLQIIIFAVIFGFAIAHIGERGKRV HHHHHHHHHHCCCCHHHHHEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AALFEDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGLGTFESVVKYFFVVLVVLLIHA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FIVYPTLLKLFSGLNPLIFIRKMRDVQLFAFSTASSNATLPITIEASEHRLGVDNKIASF HHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHEE TLPLGATINMDGTAIMQGVATVFIAQVFGIELTITDYAAVVVTATLASIGTAGVPGVGLI EECCCCEECCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHH MLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDCVATVVIAKSEGEFNETVFNNT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCHHHHHCCC QAGKVASNFDEQVHKVE CCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]