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The map label for this gene is ycjY [C]

Identifier: 117920140

GI number: 117920140

Start: 1991972

End: 1992889

Strand: Direct

Name: ycjY [C]

Synonym: Shewana3_1693

Alternate gene names: 117920140

Gene position: 1991972-1992889 (Clockwise)

Preceding gene: 117920139

Following gene: 117920141

Centisome position: 40.06

GC content: 50.87

Gene sequence:

>918_bases
ATGCAAAAAGTAACTTTTCCAAATCAATACAAGATGAATGTCACGGGCAATCTTTATTTGCCTAAGGATATGAAGGCTGG
CGAAAAACGCGCCGCCATTATCGTAGGCCACCCTATGGGTGCGGTAAAAGAACAAAGCGCCGTGCTCTATGCCCAGCAAC
TGGCCGAGCGTGGCTTTGTAACCCTTGCCATCGACTTATCCTTCTGGGGTGAGAGTGAGGGCAATCCCCGCAATGCCGTG
CTGCCGGACATGTACGCTGAAGACTTTAGCGCTGCAGTAGACTTTCTGGGCACTAGCGAGTTTGCCGACAGAGAGCGCAT
TGGCGTGCTCGGGATCTGTGGCAGCGGTAGTTTTGCCATTAGCGCCGCGAAAATTGATCCACGCATGAAAGCCATTGCCA
CCGTCAGCATGTATGACATGGGCGGATTTAGCCGTCATCTCTATGGCAAGTCGTTGACCTTAGCGCAGCGCCAACAAATG
ATCGCCGAGGCGGCCGCGCAGCGTTATGTGGAGTTTAGCGGCGGTCAAACCCAATACACCGGCGGTACGCCCCATGAAAT
CGATGAAAACTCTCACCCCATTGCTAAGGAGTTTTATGATTTCTATCGCACCCCTAGGGGAGAGTTTACGCCAGCGGGAT
CATCGCCTGAGCTGACGACGCATCCGACCCTAAGCAGTAACACTAAGTTTATGAATTTCTATCCATTTAACGATATTGAG
TCTATTTCTCCGCGCCCCTTGTTATTTGTTGCTGGCGATGAAGCGCACTCACTGGAGTTTAGCCAAGAAGCCTACAGCCT
CGCAGCGGAGCCTAAAGAACTCTATCTGGTAAAAGGTGCTGGCCATGTTGACTTGTATGACAGAGTGAAGCTGATCCCCT
TCGATAAGTTGACGCAGTTTTTCACTCAATATCTGTAA

Upstream 100 bases:

>100_bases
TGTTGATAAATACCAGCTTGTCGGCCTTTGCGGCAACATCGGGCCATCATGGTGATTTATCCCATGGTGCTAACAATTTT
ATCGGAGTGAAACCCTGACT

Downstream 100 bases:

>100_bases
TTTAGCTCATGGGCCAGCGCTTTTGCTGGCCTTGATTCGTTTTCGCAGAAGCGTGTCATTTTACGTTTCTGCCTCAATCC
ACAGGGGATGAAATATGCAA

Product: putative signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MQKVTFPNQYKMNVTGNLYLPKDMKAGEKRAAIIVGHPMGAVKEQSAVLYAQQLAERGFVTLAIDLSFWGESEGNPRNAV
LPDMYAEDFSAAVDFLGTSEFADRERIGVLGICGSGSFAISAAKIDPRMKAIATVSMYDMGGFSRHLYGKSLTLAQRQQM
IAEAAAQRYVEFSGGQTQYTGGTPHEIDENSHPIAKEFYDFYRTPRGEFTPAGSSPELTTHPTLSSNTKFMNFYPFNDIE
SISPRPLLFVAGDEAHSLEFSQEAYSLAAEPKELYLVKGAGHVDLYDRVKLIPFDKLTQFFTQYL

Sequences:

>Translated_305_residues
MQKVTFPNQYKMNVTGNLYLPKDMKAGEKRAAIIVGHPMGAVKEQSAVLYAQQLAERGFVTLAIDLSFWGESEGNPRNAV
LPDMYAEDFSAAVDFLGTSEFADRERIGVLGICGSGSFAISAAKIDPRMKAIATVSMYDMGGFSRHLYGKSLTLAQRQQM
IAEAAAQRYVEFSGGQTQYTGGTPHEIDENSHPIAKEFYDFYRTPRGEFTPAGSSPELTTHPTLSSNTKFMNFYPFNDIE
SISPRPLLFVAGDEAHSLEFSQEAYSLAAEPKELYLVKGAGHVDLYDRVKLIPFDKLTQFFTQYL
>Mature_305_residues
MQKVTFPNQYKMNVTGNLYLPKDMKAGEKRAAIIVGHPMGAVKEQSAVLYAQQLAERGFVTLAIDLSFWGESEGNPRNAV
LPDMYAEDFSAAVDFLGTSEFADRERIGVLGICGSGSFAISAAKIDPRMKAIATVSMYDMGGFSRHLYGKSLTLAQRQQM
IAEAAAQRYVEFSGGQTQYTGGTPHEIDENSHPIAKEFYDFYRTPRGEFTPAGSSPELTTHPTLSSNTKFMNFYPFNDIE
SISPRPLLFVAGDEAHSLEFSQEAYSLAAEPKELYLVKGAGHVDLYDRVKLIPFDKLTQFFTQYL

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

Organism=Escherichia coli, GI221142683, Length=289, Percent_Identity=31.8339100346021, Blast_Score=154, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 33828; Mature: 33828

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVTFPNQYKMNVTGNLYLPKDMKAGEKRAAIIVGHPMGAVKEQSAVLYAQQLAERGFV
CCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCEE
TLAIDLSFWGESEGNPRNAVLPDMYAEDFSAAVDFLGTSEFADRERIGVLGICGSGSFAI
EEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEE
SAAKIDPRMKAIATVSMYDMGGFSRHLYGKSLTLAQRQQMIAEAAAQRYVEFSGGQTQYT
EEEECCCCHHHEEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCEEEEC
GGTPHEIDENSHPIAKEFYDFYRTPRGEFTPAGSSPELTTHPTLSSNTKFMNFYPFNDIE
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCC
SISPRPLLFVAGDEAHSLEFSQEAYSLAAEPKELYLVKGAGHVDLYDRVKLIPFDKLTQF
CCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEHHHCEEECCHHHHHHH
FTQYL
HHHCC
>Mature Secondary Structure
MQKVTFPNQYKMNVTGNLYLPKDMKAGEKRAAIIVGHPMGAVKEQSAVLYAQQLAERGFV
CCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCEE
TLAIDLSFWGESEGNPRNAVLPDMYAEDFSAAVDFLGTSEFADRERIGVLGICGSGSFAI
EEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEE
SAAKIDPRMKAIATVSMYDMGGFSRHLYGKSLTLAQRQQMIAEAAAQRYVEFSGGQTQYT
EEEECCCCHHHEEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCEEEEC
GGTPHEIDENSHPIAKEFYDFYRTPRGEFTPAGSSPELTTHPTLSSNTKFMNFYPFNDIE
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCC
SISPRPLLFVAGDEAHSLEFSQEAYSLAAEPKELYLVKGAGHVDLYDRVKLIPFDKLTQF
CCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEHHHCEEECCHHHHHHH
FTQYL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1427017; 10984043 [H]