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The map label for this gene is ynfM [H]

Identifier: 117920139

GI number: 117920139

Start: 1990179

End: 1991489

Strand: Direct

Name: ynfM [H]

Synonym: Shewana3_1692

Alternate gene names: 117920139

Gene position: 1990179-1991489 (Clockwise)

Preceding gene: 117920137

Following gene: 117920140

Centisome position: 40.03

GC content: 50.5

Gene sequence:

>1311_bases
ATGTTATGCCCAGTGCTAATCTTTGTCTATCCTGAGTGTGATGCGTTATCGAGGCCAAAAGTGCAAGCCGTGTTAGACAC
TATTATCGACAGTAAACAACGTGATACCCGACTGATGTGGGCCCTGTGTGTGGCTTCCGTGGTGGTGTATATCAATCTGT
ATTTGATGCAGGGCATGTTACCGCTGATCGCCGAGCATTTTGCGGTATCGGGCTCTAAGGCAACGCTTATCCTTTCGGTC
ACCAGCTTTTCGCTGGCGTTTTCGCTGTTAATTTATGCGGTTGTGTCCGACAGAATTGGCCGCCACACGCCGATTGTCGT
GAGTCTCTGGCTACTGGCGCTGTCGAATCTGCTGTTGATTTGGGCTGGGGATTTTAATGCTCTTGTCTACGTCCGCTTTT
TACAGGGCGTGCTGTTAGCGGCGGTGCCCGCCATTGCCATGGCCTATTTTAAGGAGCAACTCTCGCCAAGCACTATGCTC
AAAGCCGCGGGTATTTATATCATGGCCAACAGTATCGGCGGGATTGTCGGTCGGTTACTGGGCGGGGTGATGTCGCAGTT
TTTATCTTGGCAAGAGTCCATGTGGCTGCTGTTTTTAGTTACGCTTGCGGGCGTTGCCTTAACCAGTTATTTATTGCCTT
CTGGCGCCGATGCGCAGGCGGTATCGGGCGGACAAACCACCTCGCCAACACTGTCAAAACGGGCACGTTTATTACAGGAT
ATTTATGGCTTTAGCCATCACCTAACCGATCCACAGATGCGTTTAGCCTATGCCATCGGTGGGATCACTTTTATGATGAT
GGTGAATCAATTTAGCTTTATTCAGCTGCATTTGATGGCCGCACCTTACGAGTGGAGCCGTTTCCAAGCGACGTTGATCT
TCCTGTGTTATTCCAGTGGTACCGTGGCTTCTTATTTTACTGCCAAGTGGCTGGCCAAATTTGGTCAGCACAAGTTATAT
CAATGGTCTTGGTGCTTGATGTTACTGGGCAGTTTATTGACCCTGTTTGATACGCCAGTCACGATTAGCCTAGGCTTTTT
GATGACGGCCTGTGGCTTCTTCTTAACCCACAGCTGCTGTAACTCCTTTGTGGCGATGCGCGCAAGCCGTGACCGCGCTA
AAGCCACCTCGCTGTATTTATGTTGCTATTACTTAGGCGCCGCGCTGGGCGGGCCTTACCTGATGCTATTTTGGCATAAA
GCCGAGTGGCAGGGAGTGGTGATGGGATCATTAACTCTCCTTGCATTAATCGCCTTAGCTATCGGTCGATTGCGTTATCA
CCAGACCCAGATGAGCCGCGTGACGCTCTAG

Upstream 100 bases:

>100_bases
TACTGTCGTATCTCGCATTGCTTGGCCGATAACAGGGTGTATCGCAACTGTTAGCTATAACAAAAATCAATAATTTCAAT
ATAAATTATCTATTATTGTT

Downstream 100 bases:

>100_bases
TTTGCTAGGCCCGTTGGCGCAGCTCTTCGCCACAGATTCAATATTTGATGAACGCTTAGGCCAACGACTCCCCGTTGGCC
TTTTTGTACACCTAATTTGC

Product: Xaa-His dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MLCPVLIFVYPECDALSRPKVQAVLDTIIDSKQRDTRLMWALCVASVVVYINLYLMQGMLPLIAEHFAVSGSKATLILSV
TSFSLAFSLLIYAVVSDRIGRHTPIVVSLWLLALSNLLLIWAGDFNALVYVRFLQGVLLAAVPAIAMAYFKEQLSPSTML
KAAGIYIMANSIGGIVGRLLGGVMSQFLSWQESMWLLFLVTLAGVALTSYLLPSGADAQAVSGGQTTSPTLSKRARLLQD
IYGFSHHLTDPQMRLAYAIGGITFMMMVNQFSFIQLHLMAAPYEWSRFQATLIFLCYSSGTVASYFTAKWLAKFGQHKLY
QWSWCLMLLGSLLTLFDTPVTISLGFLMTACGFFLTHSCCNSFVAMRASRDRAKATSLYLCCYYLGAALGGPYLMLFWHK
AEWQGVVMGSLTLLALIALAIGRLRYHQTQMSRVTL

Sequences:

>Translated_436_residues
MLCPVLIFVYPECDALSRPKVQAVLDTIIDSKQRDTRLMWALCVASVVVYINLYLMQGMLPLIAEHFAVSGSKATLILSV
TSFSLAFSLLIYAVVSDRIGRHTPIVVSLWLLALSNLLLIWAGDFNALVYVRFLQGVLLAAVPAIAMAYFKEQLSPSTML
KAAGIYIMANSIGGIVGRLLGGVMSQFLSWQESMWLLFLVTLAGVALTSYLLPSGADAQAVSGGQTTSPTLSKRARLLQD
IYGFSHHLTDPQMRLAYAIGGITFMMMVNQFSFIQLHLMAAPYEWSRFQATLIFLCYSSGTVASYFTAKWLAKFGQHKLY
QWSWCLMLLGSLLTLFDTPVTISLGFLMTACGFFLTHSCCNSFVAMRASRDRAKATSLYLCCYYLGAALGGPYLMLFWHK
AEWQGVVMGSLTLLALIALAIGRLRYHQTQMSRVTL
>Mature_436_residues
MLCPVLIFVYPECDALSRPKVQAVLDTIIDSKQRDTRLMWALCVASVVVYINLYLMQGMLPLIAEHFAVSGSKATLILSV
TSFSLAFSLLIYAVVSDRIGRHTPIVVSLWLLALSNLLLIWAGDFNALVYVRFLQGVLLAAVPAIAMAYFKEQLSPSTML
KAAGIYIMANSIGGIVGRLLGGVMSQFLSWQESMWLLFLVTLAGVALTSYLLPSGADAQAVSGGQTTSPTLSKRARLLQD
IYGFSHHLTDPQMRLAYAIGGITFMMMVNQFSFIQLHLMAAPYEWSRFQATLIFLCYSSGTVASYFTAKWLAKFGQHKLY
QWSWCLMLLGSLLTLFDTPVTISLGFLMTACGFFLTHSCCNSFVAMRASRDRAKATSLYLCCYYLGAALGGPYLMLFWHK
AEWQGVVMGSLTLLALIALAIGRLRYHQTQMSRVTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=392, Percent_Identity=31.6326530612245, Blast_Score=172, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48230; Mature: 48230

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCPVLIFVYPECDALSRPKVQAVLDTIIDSKQRDTRLMWALCVASVVVYINLYLMQGML
CCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLIAEHFAVSGSKATLILSVTSFSLAFSLLIYAVVSDRIGRHTPIVVSLWLLALSNLLLI
HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEE
WAGDFNALVYVRFLQGVLLAAVPAIAMAYFKEQLSPSTMLKAAGIYIMANSIGGIVGRLL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEHHHHHHHHHHH
GGVMSQFLSWQESMWLLFLVTLAGVALTSYLLPSGADAQAVSGGQTTSPTLSKRARLLQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
IYGFSHHLTDPQMRLAYAIGGITFMMMVNQFSFIQLHLMAAPYEWSRFQATLIFLCYSSG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCCCHHHHHEEEEEEEECCC
TVASYFTAKWLAKFGQHKLYQWSWCLMLLGSLLTLFDTPVTISLGFLMTACGFFLTHSCC
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
NSFVAMRASRDRAKATSLYLCCYYLGAALGGPYLMLFWHKAEWQGVVMGSLTLLALIALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHH
IGRLRYHQTQMSRVTL
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLCPVLIFVYPECDALSRPKVQAVLDTIIDSKQRDTRLMWALCVASVVVYINLYLMQGML
CCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLIAEHFAVSGSKATLILSVTSFSLAFSLLIYAVVSDRIGRHTPIVVSLWLLALSNLLLI
HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEE
WAGDFNALVYVRFLQGVLLAAVPAIAMAYFKEQLSPSTMLKAAGIYIMANSIGGIVGRLL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEHHHHHHHHHHH
GGVMSQFLSWQESMWLLFLVTLAGVALTSYLLPSGADAQAVSGGQTTSPTLSKRARLLQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
IYGFSHHLTDPQMRLAYAIGGITFMMMVNQFSFIQLHLMAAPYEWSRFQATLIFLCYSSG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCCCHHHHHEEEEEEEECCC
TVASYFTAKWLAKFGQHKLYQWSWCLMLLGSLLTLFDTPVTISLGFLMTACGFFLTHSCC
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
NSFVAMRASRDRAKATSLYLCCYYLGAALGGPYLMLFWHKAEWQGVVMGSLTLLALIALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHH
IGRLRYHQTQMSRVTL
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]