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The map label for this gene is nlpB [H]

Identifier: 117920104

GI number: 117920104

Start: 1947167

End: 1948264

Strand: Direct

Name: nlpB [H]

Synonym: Shewana3_1657

Alternate gene names: 117920104

Gene position: 1947167-1948264 (Clockwise)

Preceding gene: 117920103

Following gene: 117920105

Centisome position: 39.16

GC content: 48.54

Gene sequence:

>1098_bases
ATGTTAAAGAAAGTCACCCCACTGTTCCTAGTTGCTGCCGTTGCAGCTTGTAGCTCGCCATTAGAGCGTCGCCAAGCAAA
CGGCGGTGAAGACTATGTGCAGGCCGAGCAAGCGCCAATGCTGAAGATCCCCGAGGGATTAAAAGCACCGCCATACAATA
AAGAATTTGAAGTGCCTAACTTAGGGCCAAAGGCGAATTCCGCGCTGGTTGGTAAAAACCTCGATATCCGTCCTCCACTG
CAAGTATTGCCAATGGCAGAAGGTACGCACGTGGAAGAGGGCAGCGATAACATTAAGATCGTGGTTGAATCGATTGATAA
CAGCGTCGATCTTAAGCAAGAGATCTTCACTAACTTAGATGGTTTCTTTGCTAAGCAAGGCATTAGCATCCGCAACCGCG
ATTTCGATAAAGGTACTATCGAAACCGATTGGATTGAAAACACGGAAGTGTTGGAGTCTAGCCTCTGGGGTTCGGATAAA
GAGTATCTGCTGCGTCAACGTTATCGCTTCGACGTCGAAACCCGTCCACACGGCCGTACCGCGAATATCGTTATTCACTT
GGTTGAACACCAAGAGTTTTACGACGGTAAAGAGCAAGATGTCCTGTTAAGCAGTGAAGATAAACAGCGTTACACCATCG
ACATGCTAAACAGCTCTATCGCTTACATGAGTGTGAAGCGCGAGCAAGCGATTCAAGCGAACCGTCTGAAGCAGACCTTA
GGGATCAATGTGGATTTAGTTACGCCTGAAGAAGGGGCTGCTTACTGGTCCGCGAAAGCGCCATACAAGCAAGTGTGGGA
ACGTCTGCGTATCGTGCTGCCAGAAATGGGCTTTGAAATTGCCGATATGGATAGCGCCAAGGGCTTATACTTCATTAAGT
TTACCGACAACTCTGGTTTCTGGAGTTCGTTGTGGAACGACAAGCAATTGGCCCTGAAGGAAGGCAGTTACCGCATACTG
CTGGAAGACGGTGATAGCCTAGAGGAAACTAAAATCCTGCTGCGCGACGGTGAAGACCAACCGCTGTCGAATGAGGTGGT
CACGAATGTGTACCAATCATTGTCTAGCCTGATGAAAGAAGAGCGCAAACTGCGTTAA

Upstream 100 bases:

>100_bases
GTGTGGCCATATTCGTTTACCTTTGACTGAACTTTCTGAGCAATGTCATGGTCTGTTGTTAGATGCAATGACTCGCGCCC
AGATAGAGGTTAAATAATTA

Downstream 100 bases:

>100_bases
TTCTATCTCAGTCAAAAAAGGGCGATTTATCGCCCTTTTTTGTGCCTGCCATTTGAGCACCGCTGTGCTCGCCCTGCGCG
TTAACTATACAGAATGATGT

Product: NlpB/DapX family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MLKKVTPLFLVAAVAACSSPLERRQANGGEDYVQAEQAPMLKIPEGLKAPPYNKEFEVPNLGPKANSALVGKNLDIRPPL
QVLPMAEGTHVEEGSDNIKIVVESIDNSVDLKQEIFTNLDGFFAKQGISIRNRDFDKGTIETDWIENTEVLESSLWGSDK
EYLLRQRYRFDVETRPHGRTANIVIHLVEHQEFYDGKEQDVLLSSEDKQRYTIDMLNSSIAYMSVKREQAIQANRLKQTL
GINVDLVTPEEGAAYWSAKAPYKQVWERLRIVLPEMGFEIADMDSAKGLYFIKFTDNSGFWSSLWNDKQLALKEGSYRIL
LEDGDSLEETKILLRDGEDQPLSNEVVTNVYQSLSSLMKEERKLR

Sequences:

>Translated_365_residues
MLKKVTPLFLVAAVAACSSPLERRQANGGEDYVQAEQAPMLKIPEGLKAPPYNKEFEVPNLGPKANSALVGKNLDIRPPL
QVLPMAEGTHVEEGSDNIKIVVESIDNSVDLKQEIFTNLDGFFAKQGISIRNRDFDKGTIETDWIENTEVLESSLWGSDK
EYLLRQRYRFDVETRPHGRTANIVIHLVEHQEFYDGKEQDVLLSSEDKQRYTIDMLNSSIAYMSVKREQAIQANRLKQTL
GINVDLVTPEEGAAYWSAKAPYKQVWERLRIVLPEMGFEIADMDSAKGLYFIKFTDNSGFWSSLWNDKQLALKEGSYRIL
LEDGDSLEETKILLRDGEDQPLSNEVVTNVYQSLSSLMKEERKLR
>Mature_365_residues
MLKKVTPLFLVAAVAACSSPLERRQANGGEDYVQAEQAPMLKIPEGLKAPPYNKEFEVPNLGPKANSALVGKNLDIRPPL
QVLPMAEGTHVEEGSDNIKIVVESIDNSVDLKQEIFTNLDGFFAKQGISIRNRDFDKGTIETDWIENTEVLESSLWGSDK
EYLLRQRYRFDVETRPHGRTANIVIHLVEHQEFYDGKEQDVLLSSEDKQRYTIDMLNSSIAYMSVKREQAIQANRLKQTL
GINVDLVTPEEGAAYWSAKAPYKQVWERLRIVLPEMGFEIADMDSAKGLYFIKFTDNSGFWSSLWNDKQLALKEGSYRIL
LEDGDSLEETKILLRDGEDQPLSNEVVTNVYQSLSSLMKEERKLR

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=355, Percent_Identity=24.2253521126761, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 41481; Mature: 41481

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKVTPLFLVAAVAACSSPLERRQANGGEDYVQAEQAPMLKIPEGLKAPPYNKEFEVPN
CCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
LGPKANSALVGKNLDIRPPLQVLPMAEGTHVEEGSDNIKIVVESIDNSVDLKQEIFTNLD
CCCCCCCEEECCCCCCCCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCH
GFFAKQGISIRNRDFDKGTIETDWIENTEVLESSLWGSDKEYLLRQRYRFDVETRPHGRT
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCE
ANIVIHLVEHQEFYDGKEQDVLLSSEDKQRYTIDMLNSSIAYMSVKREQAIQANRLKQTL
EEEEEEEEEHHHHCCCCCCCEEECCCCCCEEEEEHHCCCHHEEEHHHHHHHHHHHHHHHH
GINVDLVTPEEGAAYWSAKAPYKQVWERLRIVLPEMGFEIADMDSAKGLYFIKFTDNSGF
CCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCH
WSSLWNDKQLALKEGSYRILLEDGDSLEETKILLRDGEDQPLSNEVVTNVYQSLSSLMKE
HHHHCCCCEEEEECCCEEEEEECCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
ERKLR
HHCCC
>Mature Secondary Structure
MLKKVTPLFLVAAVAACSSPLERRQANGGEDYVQAEQAPMLKIPEGLKAPPYNKEFEVPN
CCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
LGPKANSALVGKNLDIRPPLQVLPMAEGTHVEEGSDNIKIVVESIDNSVDLKQEIFTNLD
CCCCCCCEEECCCCCCCCCHHEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCH
GFFAKQGISIRNRDFDKGTIETDWIENTEVLESSLWGSDKEYLLRQRYRFDVETRPHGRT
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCE
ANIVIHLVEHQEFYDGKEQDVLLSSEDKQRYTIDMLNSSIAYMSVKREQAIQANRLKQTL
EEEEEEEEEHHHHCCCCCCCEEECCCCCCEEEEEHHCCCHHEEEHHHHHHHHHHHHHHHH
GINVDLVTPEEGAAYWSAKAPYKQVWERLRIVLPEMGFEIADMDSAKGLYFIKFTDNSGF
CCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCH
WSSLWNDKQLALKEGSYRILLEDGDSLEETKILLRDGEDQPLSNEVVTNVYQSLSSLMKE
HHHHCCCCEEEEECCCEEEEEECCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
ERKLR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]