| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is yhhP [C]
Identifier: 117920097
GI number: 117920097
Start: 1941605
End: 1941838
Strand: Direct
Name: yhhP [C]
Synonym: Shewana3_1650
Alternate gene names: 117920097
Gene position: 1941605-1941838 (Clockwise)
Preceding gene: 117920092
Following gene: 117920098
Centisome position: 39.05
GC content: 43.59
Gene sequence:
>234_bases ATGATTTTTATTGATTTAACATCATTTCGCTGCCCCGTTCCCTTGGTTAAGGTTAAACTTGCGTTGAAGTCCGTGTCTGC TGGTGACAGCTTACATATCCTACTCTCAGACCCAGGTTCCCGCCGAGATGTTCCCGCGTTTTTTAAAAAACAGGGGCATA GCGTGGTGACATTGCAAGATGATGCCAGCCAATTAGGGTTATTAATCACAAAAGTTGATTTATCGCAGGGATAA
Upstream 100 bases:
>100_bases TCTCTTTTAAGTGTCTCAACTAAGGCGAGGGTAGCCCTTAGCTTGTAGTTTGAGTTGCAACTTAGGATAATAGCCCAAGT TCATTCATAGCAAGTTCATT
Downstream 100 bases:
>100_bases GTCTGCACAAAGCATGATTCAATGCCGCAGTAAAAATGGCCAGTTAGCATCGCTGGTTGCAACTTCGCCTTTGCGTGTCG GTCATAGGTAGCAGTTAACT
Product: SirA family protein
Products: NA
Alternate protein names: SirA-Like Protein
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MIFIDLTSFRCPVPLVKVKLALKSVSAGDSLHILLSDPGSRRDVPAFFKKQGHSVVTLQDDASQLGLLITKVDLSQG
Sequences:
>Translated_77_residues MIFIDLTSFRCPVPLVKVKLALKSVSAGDSLHILLSDPGSRRDVPAFFKKQGHSVVTLQDDASQLGLLITKVDLSQG >Mature_77_residues MIFIDLTSFRCPVPLVKVKLALKSVSAGDSLHILLSDPGSRRDVPAFFKKQGHSVVTLQDDASQLGLLITKVDLSQG
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8320; Mature: 8320
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFIDLTSFRCPVPLVKVKLALKSVSAGDSLHILLSDPGSRRDVPAFFKKQGHSVVTLQD CEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHCCCCEEEEEEC DASQLGLLITKVDLSQG CCCCCCEEEEEEECCCC >Mature Secondary Structure MIFIDLTSFRCPVPLVKVKLALKSVSAGDSLHILLSDPGSRRDVPAFFKKQGHSVVTLQD CEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHCCCCEEEEEEC DASQLGLLITKVDLSQG CCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA