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The map label for this gene is ohrR [H]

Identifier: 117920026

GI number: 117920026

Start: 1847247

End: 1847672

Strand: Reverse

Name: ohrR [H]

Synonym: Shewana3_1578

Alternate gene names: 117920026

Gene position: 1847672-1847247 (Counterclockwise)

Preceding gene: 117920029

Following gene: 117920014

Centisome position: 37.16

GC content: 45.07

Gene sequence:

>426_bases
ATGGCTCAAAAATTATCAGACAACGTATGCTTTGCACTGTATTCGGCGACCAACTCATTAGTGCGAGCCTTTCGTCCCAT
CCTTGACGAGTATGATCTCACCTACCCCCAGTACATAGTGATGCACTCACTTTGGTACGTGAACGACGTCAGCCTCAAAG
AATTGTCTAACGACACGCGTTTAGATCCCAGCACCTTAACGCCAATCGTTAAACGCTTGGAGTCAAAAGGATTACTCACC
CGTAATTTATCCGAGTTGGATGAACGTAAAAAGGTCATTTCCCTCACCGATAAGGGCCGACAATTACAGGAAGAAGCGAC
TCAACTTACGGAGAAATTGGTGGCTCGCTCCAATATGAATGCTGAGCGTATCGAGGAATTACGTCGCTTATGTCTTGAAT
TAGAAGCAGATTTATCGAAAGACTAG

Upstream 100 bases:

>100_bases
CAAATCAACCATTACGCCTAAAAATATTTTGCACACAAACTATTTTTACAGGGTGGAATTTGTTAACATCAGCCTTCATT
GTTTATTCTGGGTACGCTTT

Downstream 100 bases:

>100_bases
CGAGCCGAATTAGCACGCTTTTAAAGCCTCCTTTTGTGAGCTCTCAATTCTAACGACATGCATCAGATTTAGAAATTCAA
TCTAAGAAGAGATTTCGGCG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MAQKLSDNVCFALYSATNSLVRAFRPILDEYDLTYPQYIVMHSLWYVNDVSLKELSNDTRLDPSTLTPIVKRLESKGLLT
RNLSELDERKKVISLTDKGRQLQEEATQLTEKLVARSNMNAERIEELRRLCLELEADLSKD

Sequences:

>Translated_141_residues
MAQKLSDNVCFALYSATNSLVRAFRPILDEYDLTYPQYIVMHSLWYVNDVSLKELSNDTRLDPSTLTPIVKRLESKGLLT
RNLSELDERKKVISLTDKGRQLQEEATQLTEKLVARSNMNAERIEELRRLCLELEADLSKD
>Mature_140_residues
AQKLSDNVCFALYSATNSLVRAFRPILDEYDLTYPQYIVMHSLWYVNDVSLKELSNDTRLDPSTLTPIVKRLESKGLLTR
NLSELDERKKVISLTDKGRQLQEEATQLTEKLVARSNMNAERIEELRRLCLELEADLSKD

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16293; Mature: 16162

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKLSDNVCFALYSATNSLVRAFRPILDEYDLTYPQYIVMHSLWYVNDVSLKELSNDTR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCC
LDPSTLTPIVKRLESKGLLTRNLSELDERKKVISLTDKGRQLQEEATQLTEKLVARSNMN
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
AERIEELRRLCLELEADLSKD
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AQKLSDNVCFALYSATNSLVRAFRPILDEYDLTYPQYIVMHSLWYVNDVSLKELSNDTR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCC
LDPSTLTPIVKRLESKGLLTRNLSELDERKKVISLTDKGRQLQEEATQLTEKLVARSNMN
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
AERIEELRRLCLELEADLSKD
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]