| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is putP [H]
Identifier: 117919899
GI number: 117919899
Start: 1682588
End: 1684039
Strand: Reverse
Name: putP [H]
Synonym: Shewana3_1451
Alternate gene names: 117919899
Gene position: 1684039-1682588 (Counterclockwise)
Preceding gene: 117919900
Following gene: 117919898
Centisome position: 33.87
GC content: 50.9
Gene sequence:
>1452_bases ATGACGATTGAAACCCCGATTTTAATCACATTTGTTGGCTATTTAGTATTGATGATGGGCATAGGATTTTGGGCTTACCG TGCCACCGATACTGTTGATGATTATATTTTAGGTGGCCGTAAAATGGGCCCCGCCGTAACCGCGCTCAGCGTGGGCGCCT CCGATATGTCAGGCTGGTTACTCTTAGGTTTACCCGGCGCCGTTTACTTAGGCGGCTTAGGCGAAGCTTGGATTGGTATC GGCTTAGTCGTCGGTGCTTGGCTTAACTGGTTGTTTGTGGCCAAACGTTTGCGCATTTACACTCAATTAGCGGACAACGC CCTCACCCTGCCCGACTTCTTCGAGAAACGTTTTCACGATAAACAGGGCTACCTCAAACTCGTCTCTGCGGTCACGATTC TGGTGTTTTTCACCTTCTATGCATCCTCTGGCATGGTGGGCGGCGCCATTCTGTTCGAAAAAGTCTTCGGACTCGATTAC ACCGTTGCCTTAGTCATTGGTTCGGCCATCATCGTGGGTTACACCTTTATTGGCGGCTTTTTTGCCGTGAGTTGGACCGA CTTCTTCCAAGGCTGCTTGATGCTGATAGCCCTGCTGATCATCCCCTTTGCGGTGTTCTCGCACCCAGAGAGCCATGCGG GAATTGAGTCTATCGACCCGGCTATGCTGGCACTTATCAGTGACAAAACCACGGTAATTGGCTTGTTATCACTGCTGGCG TGGGGACTAGGTTATTTCGGCCAGCCACATATTTTGTCGCGCTTTATGGCCATTGGCACTGCCGATGCACTACCGCTGTC TCGCCGTATCGCCATGAGCTGGATGATGTTATCCCTCATCGGCGCTTTAGCCACAGGGTTAGCGGGTTCACTGTATTTTG CCAATCAACCACTCGCCAATGCCGAAACCGTGTTTATTCATTTAGCCCAAGCCGCCTTTAACCCTTGGATTGGGGGCTTG CTGATCGCCGCAATTCTATCGGCCATTATGAGTACCATTGATTCGCAGTTATTGGTGTGCTCGAGCGTCATCACCGAAGA CTTTTACCGCAAGTGGTTGCGCCCTCAAGCCGACGATCGCGAGTTGATGATGGTAGGTCGTATGGGCGTGCTGGCCATTG CCGTGATCGCAGGCATCATTGCATTGAATCCTGAAAGCAGTGTATTAAGCCTTGTGAGCTATGCGTGGGCAGGTTTTGGC GCTGCCTTTGGCCCTGTGGTGCTCCTGTCACTCTTCTGGAAGCAATACAGCCGTAACGGTGCAATTGCTACCATTATTGT CGGCGCATTAACCGTGGTGATATGGAAGCAGCTCACAGGTGGCATTTTCGACCTATACGAAATCTTACCTGGATTTGTGT TTGCAATTATTGCAGGGGTTGTTGTGAGCAAGATGTCTCGCCCAGCAGAAACCATCACCGCAGAGTTTGAGCAATTTAAG TCCGCGTTGTAA
Upstream 100 bases:
>100_bases TCGGATTTCGGTCACATCTTTATCTACTAATGGGTTCTTGCTCAAACATCTGGTAGCATGCTTGCCACTTTTAATAATAA CAAGATGGGATAAAGACAAT
Downstream 100 bases:
>100_bases CAGCTGAAATAATTTCTGAGAACGTAAAAAGCGTACAAGTGTACGCTTTTTACAATTTGTATAAATTTATTAACCTTTCA TCAGTTACAAAACGTTAACC
Product: sodium/proline symporter
Products: NA
Alternate protein names: Proline permease; Propionate transporter [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTIETPILITFVGYLVLMMGIGFWAYRATDTVDDYILGGRKMGPAVTALSVGASDMSGWLLLGLPGAVYLGGLGEAWIGI GLVVGAWLNWLFVAKRLRIYTQLADNALTLPDFFEKRFHDKQGYLKLVSAVTILVFFTFYASSGMVGGAILFEKVFGLDY TVALVIGSAIIVGYTFIGGFFAVSWTDFFQGCLMLIALLIIPFAVFSHPESHAGIESIDPAMLALISDKTTVIGLLSLLA WGLGYFGQPHILSRFMAIGTADALPLSRRIAMSWMMLSLIGALATGLAGSLYFANQPLANAETVFIHLAQAAFNPWIGGL LIAAILSAIMSTIDSQLLVCSSVITEDFYRKWLRPQADDRELMMVGRMGVLAIAVIAGIIALNPESSVLSLVSYAWAGFG AAFGPVVLLSLFWKQYSRNGAIATIIVGALTVVIWKQLTGGIFDLYEILPGFVFAIIAGVVVSKMSRPAETITAEFEQFK SAL
Sequences:
>Translated_483_residues MTIETPILITFVGYLVLMMGIGFWAYRATDTVDDYILGGRKMGPAVTALSVGASDMSGWLLLGLPGAVYLGGLGEAWIGI GLVVGAWLNWLFVAKRLRIYTQLADNALTLPDFFEKRFHDKQGYLKLVSAVTILVFFTFYASSGMVGGAILFEKVFGLDY TVALVIGSAIIVGYTFIGGFFAVSWTDFFQGCLMLIALLIIPFAVFSHPESHAGIESIDPAMLALISDKTTVIGLLSLLA WGLGYFGQPHILSRFMAIGTADALPLSRRIAMSWMMLSLIGALATGLAGSLYFANQPLANAETVFIHLAQAAFNPWIGGL LIAAILSAIMSTIDSQLLVCSSVITEDFYRKWLRPQADDRELMMVGRMGVLAIAVIAGIIALNPESSVLSLVSYAWAGFG AAFGPVVLLSLFWKQYSRNGAIATIIVGALTVVIWKQLTGGIFDLYEILPGFVFAIIAGVVVSKMSRPAETITAEFEQFK SAL >Mature_482_residues TIETPILITFVGYLVLMMGIGFWAYRATDTVDDYILGGRKMGPAVTALSVGASDMSGWLLLGLPGAVYLGGLGEAWIGIG LVVGAWLNWLFVAKRLRIYTQLADNALTLPDFFEKRFHDKQGYLKLVSAVTILVFFTFYASSGMVGGAILFEKVFGLDYT VALVIGSAIIVGYTFIGGFFAVSWTDFFQGCLMLIALLIIPFAVFSHPESHAGIESIDPAMLALISDKTTVIGLLSLLAW GLGYFGQPHILSRFMAIGTADALPLSRRIAMSWMMLSLIGALATGLAGSLYFANQPLANAETVFIHLAQAAFNPWIGGLL IAAILSAIMSTIDSQLLVCSSVITEDFYRKWLRPQADDRELMMVGRMGVLAIAVIAGIIALNPESSVLSLVSYAWAGFGA AFGPVVLLSLFWKQYSRNGAIATIIVGALTVVIWKQLTGGIFDLYEILPGFVFAIIAGVVVSKMSRPAETITAEFEQFKS AL
Specific function: Catalyzes the sodium-dependent uptake of extracellular L-proline. This protein is also capable of using lithium as the transport cation. Also catalyzes the uptake of propionate [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=484, Percent_Identity=46.900826446281, Blast_Score=422, Evalue=1e-118, Organism=Homo sapiens, GI4507035, Length=376, Percent_Identity=24.468085106383, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI11141885, Length=399, Percent_Identity=25.8145363408521, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI17941285, Length=461, Percent_Identity=25.3796095444685, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI256985183, Length=442, Percent_Identity=23.7556561085973, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1787251, Length=494, Percent_Identity=53.0364372469636, Blast_Score=490, Evalue=1e-139, Organism=Escherichia coli, GI87082237, Length=461, Percent_Identity=27.3318872017354, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1790503, Length=460, Percent_Identity=25, Blast_Score=121, Evalue=9e-29, Organism=Escherichia coli, GI1790113, Length=406, Percent_Identity=23.1527093596059, Blast_Score=69, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17539284, Length=412, Percent_Identity=23.7864077669903, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI115533094, Length=370, Percent_Identity=23.7837837837838, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24645928, Length=382, Percent_Identity=28.0104712041885, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI221459584, Length=367, Percent_Identity=23.1607629427793, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24648033, Length=399, Percent_Identity=24.5614035087719, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI21356865, Length=399, Percent_Identity=24.5614035087719, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640370, Length=362, Percent_Identity=26.2430939226519, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 52062; Mature: 51931
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIETPILITFVGYLVLMMGIGFWAYRATDTVDDYILGGRKMGPAVTALSVGASDMSGWL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCEE LLGLPGAVYLGGLGEAWIGIGLVVGAWLNWLFVAKRLRIYTQLADNALTLPDFFEKRFHD EEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC KQGYLKLVSAVTILVFFTFYASSGMVGGAILFEKVFGLDYTVALVIGSAIIVGYTFIGGF HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FAVSWTDFFQGCLMLIALLIIPFAVFSHPESHAGIESIDPAMLALISDKTTVIGLLSLLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH WGLGYFGQPHILSRFMAIGTADALPLSRRIAMSWMMLSLIGALATGLAGSLYFANQPLAN HHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCC AETVFIHLAQAAFNPWIGGLLIAAILSAIMSTIDSQLLVCSSVITEDFYRKWLRPQADDR CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ELMMVGRMGVLAIAVIAGIIALNPESSVLSLVSYAWAGFGAAFGPVVLLSLFWKQYSRNG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AIATIIVGALTVVIWKQLTGGIFDLYEILPGFVFAIIAGVVVSKMSRPAETITAEFEQFK CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SAL HCC >Mature Secondary Structure TIETPILITFVGYLVLMMGIGFWAYRATDTVDDYILGGRKMGPAVTALSVGASDMSGWL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCEE LLGLPGAVYLGGLGEAWIGIGLVVGAWLNWLFVAKRLRIYTQLADNALTLPDFFEKRFHD EEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC KQGYLKLVSAVTILVFFTFYASSGMVGGAILFEKVFGLDYTVALVIGSAIIVGYTFIGGF HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FAVSWTDFFQGCLMLIALLIIPFAVFSHPESHAGIESIDPAMLALISDKTTVIGLLSLLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH WGLGYFGQPHILSRFMAIGTADALPLSRRIAMSWMMLSLIGALATGLAGSLYFANQPLAN HHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCC AETVFIHLAQAAFNPWIGGLLIAAILSAIMSTIDSQLLVCSSVITEDFYRKWLRPQADDR CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ELMMVGRMGVLAIAVIAGIIALNPESSVLSLVSYAWAGFGAAFGPVVLLSLFWKQYSRNG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AIATIIVGALTVVIWKQLTGGIFDLYEILPGFVFAIIAGVVVSKMSRPAETITAEFEQFK CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SAL HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3302614; 8905232; 9278503; 1400239; 3325781; 3053687; 3053649; 1567896; 8119910 [H]