Click here to switch to the map view.

The map label for this gene is 117919896

Identifier: 117919896

GI number: 117919896

Start: 1679600

End: 1680352

Strand: Reverse

Name: 117919896

Synonym: Shewana3_1448

Alternate gene names: NA

Gene position: 1680352-1679600 (Counterclockwise)

Preceding gene: 117919897

Following gene: 117919895

Centisome position: 33.79

GC content: 48.74

Gene sequence:

>753_bases
ATGGTAGCGAAAGGCATCCCATCGAGAGAATCAGTTATGCAAAAGAGTTACCTACTCCCCGCCCTCGTGCTTGGCGGTTT
TTTATGTGCGGGCATGGTCTATGTAGGACAAAGCGCTAGCTCGGCGCTGTTAGAGATGAAAGCCCTAGAGCGCACAGTCA
CAGTTAAAGGGCTGGCCGAAAAGGAAGTGAAAGCCAATATCGCCATCTGGCCGATTAACTTCACCGAAGTCGACAATAAC
CTGCCTAAGCTCTACGACACAGTGCAGCAAAAAACCGACAGAGTGGTCGCCTTCCTCAAGGAACAGGGTTTTAGCGACAG
CGAGATTACCGTATCGCTGCCGACGATAGAAGACAGGCAGGCCCAAGGCTACGTCGACCCGAACGTGAGGTATCGTTACT
CGGCTAAGGTGAATCTTTCTGTCTATACCCCACAGATTGATTTAATGCTAAGCACGCGTAAGCAAATGATAAATTTGGTT
AAAGAAGGCATTGCCATCGGTAGCCAAGATTATGAAAACCGCACCGAGTTTTTATTTACGGCGCTCAATGATGTGAAACC
GACCATGGTGCAGGAAGCGACGCAAAATGCGCGGGAAGTGGCCGAAAAGTTTGCCAAGGACTCACAATCGCGTTTGGGTA
AGATTAAGAGTGCCAGCCAAGGCCAGTTTACGATTTCCGATCGTGACAGCAGCACGCCTTACATAAAACAAATTCGCATT
GTGTCTACGCTGACCTATTATTTAAACGACTGA

Upstream 100 bases:

>100_bases
TTGCAACAACAGCTTTTCAATCCTGAATAGCAGCTGAGCATTTAGTATTAAGCGCTCAGCTTTGCGCCTTCACCTATGCC
CAAAATCATCTAATTGCAGT

Downstream 100 bases:

>100_bases
TATTTAAAGCAGGACAAAGACCTAAGAGTGATGACATGGCGATTGATGTAAGGGAAGATTCATTCGCCGTTTCCCTATAT
TAGCGAAATCGATTACATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MVAKGIPSRESVMQKSYLLPALVLGGFLCAGMVYVGQSASSALLEMKALERTVTVKGLAEKEVKANIAIWPINFTEVDNN
LPKLYDTVQQKTDRVVAFLKEQGFSDSEITVSLPTIEDRQAQGYVDPNVRYRYSAKVNLSVYTPQIDLMLSTRKQMINLV
KEGIAIGSQDYENRTEFLFTALNDVKPTMVQEATQNAREVAEKFAKDSQSRLGKIKSASQGQFTISDRDSSTPYIKQIRI
VSTLTYYLND

Sequences:

>Translated_250_residues
MVAKGIPSRESVMQKSYLLPALVLGGFLCAGMVYVGQSASSALLEMKALERTVTVKGLAEKEVKANIAIWPINFTEVDNN
LPKLYDTVQQKTDRVVAFLKEQGFSDSEITVSLPTIEDRQAQGYVDPNVRYRYSAKVNLSVYTPQIDLMLSTRKQMINLV
KEGIAIGSQDYENRTEFLFTALNDVKPTMVQEATQNAREVAEKFAKDSQSRLGKIKSASQGQFTISDRDSSTPYIKQIRI
VSTLTYYLND
>Mature_250_residues
MVAKGIPSRESVMQKSYLLPALVLGGFLCAGMVYVGQSASSALLEMKALERTVTVKGLAEKEVKANIAIWPINFTEVDNN
LPKLYDTVQQKTDRVVAFLKEQGFSDSEITVSLPTIEDRQAQGYVDPNVRYRYSAKVNLSVYTPQIDLMLSTRKQMINLV
KEGIAIGSQDYENRTEFLFTALNDVKPTMVQEATQNAREVAEKFAKDSQSRLGKIKSASQGQFTISDRDSSTPYIKQIRI
VSTLTYYLND

Specific function: Unknown

COG id: COG2859

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27942; Mature: 27942

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAKGIPSRESVMQKSYLLPALVLGGFLCAGMVYVGQSASSALLEMKALERTVTVKGLAE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHH
KEVKANIAIWPINFTEVDNNLPKLYDTVQQKTDRVVAFLKEQGFSDSEITVSLPTIEDRQ
HHHHCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
AQGYVDPNVRYRYSAKVNLSVYTPQIDLMLSTRKQMINLVKEGIAIGSQDYENRTEFLFT
CCCCCCCCCEEEEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ALNDVKPTMVQEATQNAREVAEKFAKDSQSRLGKIKSASQGQFTISDRDSSTPYIKQIRI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHH
VSTLTYYLND
HHHHHHHCCC
>Mature Secondary Structure
MVAKGIPSRESVMQKSYLLPALVLGGFLCAGMVYVGQSASSALLEMKALERTVTVKGLAE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHH
KEVKANIAIWPINFTEVDNNLPKLYDTVQQKTDRVVAFLKEQGFSDSEITVSLPTIEDRQ
HHHHCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
AQGYVDPNVRYRYSAKVNLSVYTPQIDLMLSTRKQMINLVKEGIAIGSQDYENRTEFLFT
CCCCCCCCCEEEEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ALNDVKPTMVQEATQNAREVAEKFAKDSQSRLGKIKSASQGQFTISDRDSSTPYIKQIRI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHH
VSTLTYYLND
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA