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The map label for this gene is trbG [H]

Identifier: 117919738

GI number: 117919738

Start: 1500882

End: 1501874

Strand: Direct

Name: trbG [H]

Synonym: Shewana3_1290

Alternate gene names: 117919738

Gene position: 1500882-1501874 (Clockwise)

Preceding gene: 117919737

Following gene: 117919739

Centisome position: 30.19

GC content: 66.77

Gene sequence:

>993_bases
ATGAACCTGCCTTTCCGCTTTCACGCTTTGCCGTTGATCCTGCTTGCCCTCGCGGGCTGCGCCTCGCAGGGCAAGCCGCC
GCCGACCATCTCACTTGATGAGTCAGTGCTGGCCCAGCCGCTGCCCGAACCGCTCGCGCCGGTGGAAGTCGTCGCCGTCC
CCGAGCCGCTGGCGTTGCCGGCGCAGTTGAAGCCACTGCCGGAGGTCGATGCGGCCCCGGCTGCGCCGGAGCCAGCCGAC
GAGAAGGTACGTGTTTCCCGTGCCAACGCCGAGGCACGCATCGCACCCACACGCGAGGGCTACGTCAATGCTATCCAGGT
GTGGCCTTTCACCGATGGTGCGCTTTATCAGGTCTATGCCTCGCCGGGGCGCGTGACCGTGGTTTCGCTCCAGCCGGGCG
AGGAACTGGTGACGGTCGCCGCCGGCGATACCGTGCGCTGGATCGTGGGCGACACGTCCAGCGGCAGCAGCGACGCGCTG
CGCGTTAATGTGCTGGTCAAGCCCATCCGCTCGGGCCTGAAAACCAATCTGGTCATCACCACCAGCCGGCGCACCTACCT
GCTGGAGCTGACCTCAACGGAAAAGGCATGGATGGCCTCGGTATCCTGGGACTATCCACGCGACCGGATGCTGGCCTTGC
AGCGCCAGTCGCAGGCGGCCAGCGCCGCCGCGCCAGTCGATACCGGCCTGGCGTTGGAGAAGATCCGCTTCCGTTACGCG
GTATCGGGCAGCAACCCGCCGTGGAAGCCGCTGCGTGCCTTCGATGACGGCGAGAAGGTCTATATCCAGTTTCCGGCGGG
CATTGCCCAGGGCGAGCTGCCGCCGCTGTTCGTCATCGGCGTGCAGGGCGACGGGCAACTGGTGAATTATCGTTTCCGCT
CGCCGTACTACATCGTGGATCGCCTGTTCGGCGCGGCCGAACTGCGGCTGGGCGGCGATGGCGGCGACGTGGTGCGGATC
GAGCGCACCGATGGCGTGGCGCGGAGGAACTGA

Upstream 100 bases:

>100_bases
CCCCGCGCACCGAACAGCGCCTGCGCAAGAACCCGTTGGGTATCTACGTCAACGGCCTGTCGTGGAGCCGCGAACTGGAT
TCTTCCGAAGGAGCCAAGCC

Downstream 100 bases:

>100_bases
CCATGAGCCAGGATGACACTCCCGACCTCGCCGCTCCGCCGGCGGGCAAGGTGGCGCCCGAGGCTGTGGCGCTGCGTGCC
CAGCCGCGTCCGGTCACGCG

Product: conjugal transfer protein TrbG/VirB9/CagX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNLPFRFHALPLILLALAGCASQGKPPPTISLDESVLAQPLPEPLAPVEVVAVPEPLALPAQLKPLPEVDAAPAAPEPAD
EKVRVSRANAEARIAPTREGYVNAIQVWPFTDGALYQVYASPGRVTVVSLQPGEELVTVAAGDTVRWIVGDTSSGSSDAL
RVNVLVKPIRSGLKTNLVITTSRRTYLLELTSTEKAWMASVSWDYPRDRMLALQRQSQAASAAAPVDTGLALEKIRFRYA
VSGSNPPWKPLRAFDDGEKVYIQFPAGIAQGELPPLFVIGVQGDGQLVNYRFRSPYYIVDRLFGAAELRLGGDGGDVVRI
ERTDGVARRN

Sequences:

>Translated_330_residues
MNLPFRFHALPLILLALAGCASQGKPPPTISLDESVLAQPLPEPLAPVEVVAVPEPLALPAQLKPLPEVDAAPAAPEPAD
EKVRVSRANAEARIAPTREGYVNAIQVWPFTDGALYQVYASPGRVTVVSLQPGEELVTVAAGDTVRWIVGDTSSGSSDAL
RVNVLVKPIRSGLKTNLVITTSRRTYLLELTSTEKAWMASVSWDYPRDRMLALQRQSQAASAAAPVDTGLALEKIRFRYA
VSGSNPPWKPLRAFDDGEKVYIQFPAGIAQGELPPLFVIGVQGDGQLVNYRFRSPYYIVDRLFGAAELRLGGDGGDVVRI
ERTDGVARRN
>Mature_330_residues
MNLPFRFHALPLILLALAGCASQGKPPPTISLDESVLAQPLPEPLAPVEVVAVPEPLALPAQLKPLPEVDAAPAAPEPAD
EKVRVSRANAEARIAPTREGYVNAIQVWPFTDGALYQVYASPGRVTVVSLQPGEELVTVAAGDTVRWIVGDTSSGSSDAL
RVNVLVKPIRSGLKTNLVITTSRRTYLLELTSTEKAWMASVSWDYPRDRMLALQRQSQAASAAAPVDTGLALEKIRFRYA
VSGSNPPWKPLRAFDDGEKVYIQFPAGIAQGELPPLFVIGVQGDGQLVNYRFRSPYYIVDRLFGAAELRLGGDGGDVVRI
ERTDGVARRN

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014142 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 35641; Mature: 35641

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPFRFHALPLILLALAGCASQGKPPPTISLDESVLAQPLPEPLAPVEVVAVPEPLALP
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCEEEEECCCCCCCC
AQLKPLPEVDAAPAAPEPADEKVRVSRANAEARIAPTREGYVNAIQVWPFTDGALYQVYA
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCEEEEEEEECCCCCEEEEEE
SPGRVTVVSLQPGEELVTVAAGDTVRWIVGDTSSGSSDALRVNVLVKPIRSGLKTNLVIT
CCCEEEEEEECCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEEHHHHCCCCEEEEEE
TSRRTYLLELTSTEKAWMASVSWDYPRDRMLALQRQSQAASAAAPVDTGLALEKIRFRYA
ECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEE
VSGSNPPWKPLRAFDDGEKVYIQFPAGIAQGELPPLFVIGVQGDGQLVNYRFRSPYYIVD
ECCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEH
RLFGAAELRLGGDGGDVVRIERTDGVARRN
HHCCEEEEEECCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MNLPFRFHALPLILLALAGCASQGKPPPTISLDESVLAQPLPEPLAPVEVVAVPEPLALP
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCEEEEECCCCCCCC
AQLKPLPEVDAAPAAPEPADEKVRVSRANAEARIAPTREGYVNAIQVWPFTDGALYQVYA
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCEEEEEEEECCCCCEEEEEE
SPGRVTVVSLQPGEELVTVAAGDTVRWIVGDTSSGSSDALRVNVLVKPIRSGLKTNLVIT
CCCEEEEEEECCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEEHHHHCCCCEEEEEE
TSRRTYLLELTSTEKAWMASVSWDYPRDRMLALQRQSQAASAAAPVDTGLALEKIRFRYA
ECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEE
VSGSNPPWKPLRAFDDGEKVYIQFPAGIAQGELPPLFVIGVQGDGQLVNYRFRSPYYIVD
ECCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEH
RLFGAAELRLGGDGGDVVRIERTDGVARRN
HHCCEEEEEECCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]