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The map label for this gene is 117919717

Identifier: 117919717

GI number: 117919717

Start: 1483049

End: 1483843

Strand: Reverse

Name: 117919717

Synonym: Shewana3_1269

Alternate gene names: NA

Gene position: 1483843-1483049 (Counterclockwise)

Preceding gene: 117919741

Following gene: 117919707

Centisome position: 29.84

GC content: 58.62

Gene sequence:

>795_bases
ATGCGCACCTTGAAACGAACTCGCGACGAACTCGGGGCTTTTTTGCGCGCACGTCGTGAACGGTTATCGCCCACTGATTT
AGGCCTCCCTAGTGGAGGACGTCGGCGTACGCCAGGGCTTCGCAGAGAGGAGGTGGCAGCACTCGCCGGTGTTGGGCTGA
CTTGGTATACATGGCTGGAGCAAGGCCGTGACATAGGCGTGTCAGCCACGTTCCTGGACAATTTGGCAAGGGTACTGAAG
CTAGATGCAGCAGAGCGCCGCCACCTGTATCTGTTGGCCCACGAACGCCCACCAGCCGAACCAGGCAAAACCTGGTGCGT
GCTGCCGCCACTGGTGCGACGTTTGATGCTCGACTTGCCGCACCCCGCCTTCGTGCTCAACCTGCGCTGGGACGTGCTGG
GCTTCAATGCGCCAGCTGATGCACTGTTCGGCTTTGGCAAGCACGCCCCCGAACGTCGCAACCTGCTATGGATGCTGTTT
ACCGATTCCGTCCTGCACGAGCGCGTGGACGCCTGGGAAGAGCAAGCCCAGCAAATGCTGTCGAGCTTTCGTCTCGATTT
CGCCCGAGCCACCCAGGAAGTAGACATCCATGAATTGGTGGACGAGCTGAAACGGGTGTCGCCGGAATTCAAAATGTGGT
GGCGAGCGCACGATGTGCACGCCCCCTGTAACGGCGTGCGCGATTTTAAACTGGATGGTGAGGTGGTTGAATTTGAGCAC
ACTTCGTTGACCATCGACGCAGAACGCCATCTGCGCTTGGTGGTCTATGCGAAAGTCGAGACAACAGCTTACTAA

Upstream 100 bases:

>100_bases
ATATTGCATCTCCATCGCGATAAAGCGATCATTCTCAAACCCTTTTTAAACAAGTACAATTTAACAACTTATGCTATTAC
TAAAAGCAACGAGATAAACT

Downstream 100 bases:

>100_bases
GCGATGGTTGGCCCTCTCTGCCGCCCAATCTCCCACGACACCCCACCACCACGTACAGTCGCGGCGATCTGCTGACCCAG
CCGCTGCTCGATCACCGGCT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Protein; XRE Family Transcription Regulator Protein; Helix-Turn-Helix Domain Containing Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRTLKRTRDELGAFLRARRERLSPTDLGLPSGGRRRTPGLRREEVAALAGVGLTWYTWLEQGRDIGVSATFLDNLARVLK
LDAAERRHLYLLAHERPPAEPGKTWCVLPPLVRRLMLDLPHPAFVLNLRWDVLGFNAPADALFGFGKHAPERRNLLWMLF
TDSVLHERVDAWEEQAQQMLSSFRLDFARATQEVDIHELVDELKRVSPEFKMWWRAHDVHAPCNGVRDFKLDGEVVEFEH
TSLTIDAERHLRLVVYAKVETTAY

Sequences:

>Translated_264_residues
MRTLKRTRDELGAFLRARRERLSPTDLGLPSGGRRRTPGLRREEVAALAGVGLTWYTWLEQGRDIGVSATFLDNLARVLK
LDAAERRHLYLLAHERPPAEPGKTWCVLPPLVRRLMLDLPHPAFVLNLRWDVLGFNAPADALFGFGKHAPERRNLLWMLF
TDSVLHERVDAWEEQAQQMLSSFRLDFARATQEVDIHELVDELKRVSPEFKMWWRAHDVHAPCNGVRDFKLDGEVVEFEH
TSLTIDAERHLRLVVYAKVETTAY
>Mature_264_residues
MRTLKRTRDELGAFLRARRERLSPTDLGLPSGGRRRTPGLRREEVAALAGVGLTWYTWLEQGRDIGVSATFLDNLARVLK
LDAAERRHLYLLAHERPPAEPGKTWCVLPPLVRRLMLDLPHPAFVLNLRWDVLGFNAPADALFGFGKHAPERRNLLWMLF
TDSVLHERVDAWEEQAQQMLSSFRLDFARATQEVDIHELVDELKRVSPEFKMWWRAHDVHAPCNGVRDFKLDGEVVEFEH
TSLTIDAERHLRLVVYAKVETTAY

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30477; Mature: 30477

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLKRTRDELGAFLRARRERLSPTDLGLPSGGRRRTPGLRREEVAALAGVGLTWYTWLE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
QGRDIGVSATFLDNLARVLKLDAAERRHLYLLAHERPPAEPGKTWCVLPPLVRRLMLDLP
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHCC
HPAFVLNLRWDVLGFNAPADALFGFGKHAPERRNLLWMLFTDSVLHERVDAWEEQAQQML
CCEEEEEEEEEEEECCCCHHHHHHCCCCCCCHHCEEEEEEHHHHHHHHHHHHHHHHHHHH
SSFRLDFARATQEVDIHELVDELKRVSPEFKMWWRAHDVHAPCNGVRDFKLDGEVVEFEH
HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCCCEECCCCEEEEEC
TSLTIDAERHLRLVVYAKVETTAY
CEEEEEHHHCEEEEEEEEEEECCC
>Mature Secondary Structure
MRTLKRTRDELGAFLRARRERLSPTDLGLPSGGRRRTPGLRREEVAALAGVGLTWYTWLE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
QGRDIGVSATFLDNLARVLKLDAAERRHLYLLAHERPPAEPGKTWCVLPPLVRRLMLDLP
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHCC
HPAFVLNLRWDVLGFNAPADALFGFGKHAPERRNLLWMLFTDSVLHERVDAWEEQAQQML
CCEEEEEEEEEEEECCCCHHHHHHCCCCCCCHHCEEEEEEHHHHHHHHHHHHHHHHHHHH
SSFRLDFARATQEVDIHELVDELKRVSPEFKMWWRAHDVHAPCNGVRDFKLDGEVVEFEH
HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCCCEECCCCEEEEEC
TSLTIDAERHLRLVVYAKVETTAY
CEEEEEHHHCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA