| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is engA [H]
Identifier: 117919682
GI number: 117919682
Start: 1437022
End: 1438488
Strand: Direct
Name: engA [H]
Synonym: Shewana3_1233
Alternate gene names: 117919682
Gene position: 1437022-1438488 (Clockwise)
Preceding gene: 117919681
Following gene: 117919684
Centisome position: 28.9
GC content: 51.33
Gene sequence:
>1467_bases ATGATCCCTGTAGTGGCCCTTGTTGGTCGGCCGAACGTCGGTAAATCCACTTTATTTAACCGCCTTACGCGTACGCGTGA TGCGCTGGTTGCTGACTTTCCTGGCCTAACACGTGACCGTAAATATGGTCGAGCATTCCTATCCGGCTATGAGTTTATCG TGGTGGATACCGGCGGTATCGACGGCACCGAAGAGGGGATCGAAACTAAGATGGCCGAGCAGTCCCTTGCCGCTATCGAA GAAGCCGATGTTGTCTTATTTATGACCGATGCGCGCGCGGGCTTAACCGCCGCGGATTTGTCTATCGCTCAACACTTACG TAGCCGTCAAAAAACCACTTTCGTGGTCGCTAACAAGATTGACGGTATCGATGCCGATTCTGCCTGCGCCGAGTTTTGGT CGTTAGGTTTAGGTGAGGTCTACCAAATGGCTGCCGCCCAAGGCCGCGGCGTGACCAACATGATTGAGTACGCCTTAACT CCTTATGCTGAAGCGATGGGGATTGAACGCCAAGGCGAAGAGGAAGAGGTCGACGAGCGTCAGTACACCGAAGAAGAAGC CGAAGCCGAGCAGAAGCGTCTGCAGGATTTACCGATTAAGCTTGCGATTATCGGTAAGCCTAACGTAGGTAAATCGACGC TGACTAACCGTATTTTAGGTGAAGAGCGTGTGGTGGTTTACGACGAGCCGGGCACCACTCGCGACAGTATTTACATTCCG ATGGAACGCGATGGCCGCGAATACGTGATTATCGATACAGCTGGTGTGCGTCGCCGCAGTAAAGTCCATGAAGTGATTGA AAAATTCTCGGTGATCAAAACCCTAAAAGCGGTTGAAGATGCCAACGTTGTGCTGCTGATCATCGATGCCCGTGAAGGGA TTGCCGAGCAGGATTTAGGTCTATTAGGTTTTGCTTTGAACGCGGGCCGCGCCTTAGTTATCGCCGTCAACAAGTGGGAC GGTATCGATCAGGGCATTAAAGACCGGGTTAAGAGTGAACTCGACCGCCGTTTAGGCTTTATCGACTTTGCTCGTATTCA CTTTATTTCGGCGCTACATGGTACGGGCGTTGGCCATCTGTTTGAGTCGATTGAAGAAGCTTACGACAGTGCGACTCGCC GCGTGAGCACCTCTATGCTGACCCGCATTATGCAAATGTCGCAGGATGACCATCAGCCACCATTGGTGAACGGTCGCCGT GTGAAACTGAAATACGCCCACGCCGGTGGTTATAACCCGCCAATTGTGGTTATTCACGGTAACCAAGTCAGCAAGCTACC GGATTCTTACAAGCGCTACATGATGAACTACTTCCGTCGTTCATTAAAAGTGGTCGGTACGCCAATTCAGCTGCGTTTCC AAGAGGGTGATAACCCGTTTGAAAACAAGGTTGAAAAGCTGACCATGAGCCAAGAGCGTCGTCGTAAGCGCGCACTGAGC CATATTAAAGATCGCAAGACAAAGTAA
Upstream 100 bases:
>100_bases GCTGTTGTAACACTTCCTTAGTTAAAAGTGTTATCCTTGTAGAGCCCCTGGAAGTGTGTTCCGGGGGCTTTTTATTGAAA AGTTTTTTAGAGGCAAAATC
Downstream 100 bases:
>100_bases ATCTGTGCTATTGGCTTAAGCGGAACATAAAAAAGGAACCCTAGGGTTCCTTTTTTATTGGCGTATTTTAGGGCGCAATC ATAAGTCTTGTTTAGATAAA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTEEGIETKMAEQSLAAIE EADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANKIDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT PYAEAMGIERQGEEEEVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP MERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGIAEQDLGLLGFALNAGRALVIAVNKWD GIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRR VKLKYAHAGGYNPPIVVIHGNQVSKLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKVEKLTMSQERRRKRALS HIKDRKTK
Sequences:
>Translated_488_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTEEGIETKMAEQSLAAIE EADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANKIDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT PYAEAMGIERQGEEEEVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP MERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGIAEQDLGLLGFALNAGRALVIAVNKWD GIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRR VKLKYAHAGGYNPPIVVIHGNQVSKLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKVEKLTMSQERRRKRALS HIKDRKTK >Mature_488_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTEEGIETKMAEQSLAAIE EADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANKIDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT PYAEAMGIERQGEEEEVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP MERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGIAEQDLGLLGFALNAGRALVIAVNKWD GIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRR VKLKYAHAGGYNPPIVVIHGNQVSKLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKVEKLTMSQERRRKRALS HIKDRKTK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=490, Percent_Identity=71.2244897959184, Blast_Score=725, Evalue=0.0, Organism=Escherichia coli, GI2367268, Length=103, Percent_Identity=38.8349514563107, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=144, Percent_Identity=34.0277777777778, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 54647; Mature: 54647
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCC DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANKI CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECC DGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIERQGEEEEVDER CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHH QYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEEE MERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGIAEQDLG ECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCC LLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHL CEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH FESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVIHG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEC NQVSKLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKVEKLTMSQERRRKRALS CCHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH HIKDRKTK HHHHCCCC >Mature Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCC DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANKI CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECC DGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIERQGEEEEVDER CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHH QYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIP HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCEEEE MERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGIAEQDLG ECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCC LLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHL CEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH FESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVIHG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEC NQVSKLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKVEKLTMSQERRRKRALS CCHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH HIKDRKTK HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA