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The map label for this gene is yfgL [H]

Identifier: 117919681

GI number: 117919681

Start: 1435755

End: 1436942

Strand: Direct

Name: yfgL [H]

Synonym: Shewana3_1232

Alternate gene names: 117919681

Gene position: 1435755-1436942 (Clockwise)

Preceding gene: 117919680

Following gene: 117919682

Centisome position: 28.88

GC content: 51.18

Gene sequence:

>1188_bases
ATGAAGTCTTGGTGCAAGAACCTGCTAGCCGCTGGGTTAAGCCTAGCCATGTTATCCGCCTGTTCTTCTAGCGATGTAGA
AGAAGAACCGGTAAGTGAGTTAACTGCGATTCAGGCGACAGTGTTTCCTGAAGTAAGTTGGAGCGCCTCTGTAGGTGACG
GTGTCGGTGATTATTACTCTCGCCTCACTCCTGCAGTTCGTTACGGTAAAATTTTTGCAGCCGACCGCTACGGCGAAGTC
GTGGCCTTTGATGAAGCCACGGGTGAGCGCGTTTGGAAGAAAGATTTTAGTGAAGAGTTTCGCGATAACGCCTTAGCCAA
AAACAAGGGCGCACGCTTAGCCGCAGGTGTTACTGCCGCGCGCAATAAAATCTTTGTCGGTGGAGAGAGTGGTCTTTTGG
CCGCGCTGAATGCCGAAGATGGTCAAGTGCTGTGGCATGTCGTGACTGGGGGGGAGTTACTCTCTAAGCCAACCGTTGCT
GACGATGTGGTGGTGGTGAGCACGAGCTCTGGCGCCCTCGAAGCCTTTAACGTCGATACGGGCGCTAAGCTGTGGGCCTA
TGAGATGCAGTTGCCTAATCTGACCTTACGTGGCACAGGTTCTGCGGCCTATGAAGCGGGTGGTTTCTTTATCGGGACCG
CCGATGGCAAAGTCGCAGTTGTGGTGAAAAACAATGGACAAGCCGCATGGGAACAAGCGATTTATAATCCAACTGGCGGC
AATGAGTTTACTCGTATGGCCGATGTGGATATGACGCCGCTGATCTTAGGTGACAACCTTTATGCGGTGAGCTACAACGG
TAACTTGGTGTCGATGGAACTGCGTACCGGACGTGTGATTTGGACGCGTAAGTACTCCAGCTTCAATGAGTTAGCGTCTG
CAGGTTTAAGCTTATTCCTAGTCGATGATCACAGCCGTATCTACTCTGTGGACAGACGTAACGGCTTAGAATTGTGGAGC
AACTCTGAGCTGGCAAACCGTACACTCACGTCACCAGCCGTATATCGCGACTATCTGGTCGTGGGCGATTTTGAAGGTTA
TCTGCACTTTATTGACCGCAGCACAGGCAGTATTGTCGGTCGTATCCAAGTGGACAGCTCTGGATTATTCAGCCAGCCAT
TAGTGGTGGATGATAAAATCTACGTGCAAGGTCGCAGCGGAAAGTTAGCTGTTGTAACACTTCCTTAG

Upstream 100 bases:

>100_bases
AAACCGCTTACCAAGCGGCAATGGACAATGGCGGTGTTGTGACCAGCCCTGCACTTAAAATCAAACTTGATAACCTAAAT
CAAGCATAAGGGATCCCTTG

Downstream 100 bases:

>100_bases
TTAAAAGTGTTATCCTTGTAGAGCCCCTGGAAGTGTGTTCCGGGGGCTTTTTATTGAAAAGTTTTTTAGAGGCAAAATCA
TGATCCCTGTAGTGGCCCTT

Product: outer membrane protein assembly complex subunit YfgL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYSRLTPAVRYGKIFAADRYGEV
VAFDEATGERVWKKDFSEEFRDNALAKNKGARLAAGVTAARNKIFVGGESGLLAALNAEDGQVLWHVVTGGELLSKPTVA
DDVVVVSTSSGALEAFNVDTGAKLWAYEMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRVIWTRKYSSFNELASAGLSLFLVDDHSRIYSVDRRNGLELWS
NSELANRTLTSPAVYRDYLVVGDFEGYLHFIDRSTGSIVGRIQVDSSGLFSQPLVVDDKIYVQGRSGKLAVVTLP

Sequences:

>Translated_395_residues
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYSRLTPAVRYGKIFAADRYGEV
VAFDEATGERVWKKDFSEEFRDNALAKNKGARLAAGVTAARNKIFVGGESGLLAALNAEDGQVLWHVVTGGELLSKPTVA
DDVVVVSTSSGALEAFNVDTGAKLWAYEMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRVIWTRKYSSFNELASAGLSLFLVDDHSRIYSVDRRNGLELWS
NSELANRTLTSPAVYRDYLVVGDFEGYLHFIDRSTGSIVGRIQVDSSGLFSQPLVVDDKIYVQGRSGKLAVVTLP
>Mature_395_residues
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYSRLTPAVRYGKIFAADRYGEV
VAFDEATGERVWKKDFSEEFRDNALAKNKGARLAAGVTAARNKIFVGGESGLLAALNAEDGQVLWHVVTGGELLSKPTVA
DDVVVVSTSSGALEAFNVDTGAKLWAYEMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRVIWTRKYSSFNELASAGLSLFLVDDHSRIYSVDRRNGLELWS
NSELANRTLTSPAVYRDYLVVGDFEGYLHFIDRSTGSIVGRIQVDSSGLFSQPLVVDDKIYVQGRSGKLAVVTLP

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=382, Percent_Identity=37.434554973822, Blast_Score=281, Evalue=4e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 42556; Mature: 42556

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHH
RLTPAVRYGKIFAADRYGEVVAFDEATGERVWKKDFSEEFRDNALAKNKGARLAAGVTAA
HHCCHHHHCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHCCCCCEEEECEEEC
RNKIFVGGESGLLAALNAEDGQVLWHVVTGGELLSKPTVADDVVVVSTSSGALEAFNVDT
CCEEEECCCCCEEEEEECCCCEEEEEEEECCHHHCCCCCCCCEEEEEECCCCEEEEECCC
GAKLWAYEMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
CCEEEEEEEECCCEEEEECCCCCEECCCEEEECCCCEEEEEEECCCCHHHHHHCCCCCCC
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRVIWTRKYSSFNELASAGLSLFL
CCCEEEECCCCCEEEECCCEEEEEECCCEEEEEEECCEEEEEEECCCHHHHHHCCEEEEE
VDDHSRIYSVDRRNGLELWSNSELANRTLTSPAVYRDYLVVGDFEGYLHFIDRSTGSIVG
EECCCEEEEECCCCCCEEECCCCHHCCCCCCCHHEEEEEEEECCCCEEEEEECCCCCEEE
RIQVDSSGLFSQPLVVDDKIYVQGRSGKLAVVTLP
EEEECCCCCCCCCEEECCEEEEECCCCCEEEEECC
>Mature Secondary Structure
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHH
RLTPAVRYGKIFAADRYGEVVAFDEATGERVWKKDFSEEFRDNALAKNKGARLAAGVTAA
HHCCHHHHCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHCCCCCEEEECEEEC
RNKIFVGGESGLLAALNAEDGQVLWHVVTGGELLSKPTVADDVVVVSTSSGALEAFNVDT
CCEEEECCCCCEEEEEECCCCEEEEEEEECCHHHCCCCCCCCEEEEEECCCCEEEEECCC
GAKLWAYEMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG
CCEEEEEEEECCCEEEEECCCCCEECCCEEEECCCCEEEEEEECCCCHHHHHHCCCCCCC
NEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRVIWTRKYSSFNELASAGLSLFL
CCCEEEECCCCCEEEECCCEEEEEECCCEEEEEEECCEEEEEEECCCHHHHHHCCEEEEE
VDDHSRIYSVDRRNGLELWSNSELANRTLTSPAVYRDYLVVGDFEGYLHFIDRSTGSIVG
EECCCEEEEECCCCCCEEECCCCHHCCCCCCCHHEEEEEEEECCCCEEEEEECCCCCEEE
RIQVDSSGLFSQPLVVDDKIYVQGRSGKLAVVTLP
EEEECCCCCCCCCEEECCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]