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The map label for this gene is 117919676

Identifier: 117919676

GI number: 117919676

Start: 1430603

End: 1431391

Strand: Direct

Name: 117919676

Synonym: Shewana3_1227

Alternate gene names: NA

Gene position: 1430603-1431391 (Clockwise)

Preceding gene: 117919675

Following gene: 117919677

Centisome position: 28.77

GC content: 46.39

Gene sequence:

>789_bases
ATGAAGCATGGATTGTCAGGGTTATCATTAGCAATTGCCCTGTCATTATTAGTGACAGGATGCGTAACTGAGCGTACCTA
TTCAGGGACTGATATTCCCGTGTCGGAGCGAAAACTCGATAAAGTTGCCGCCGCACGGGAGCGTATGCAGCTCGGTTTAA
CCTACCTTAATCGAGGTAACTCGGAACAAGCCAAATACAATCTTGATAAAGCCGTTGAATATGCGCCAGAGCTCGAAGAT
GTGCATGTGGCCATGGCCTATTACTATCAAACCGTTGGCGATTTAGTACGTACCGAACAGGCGTATCAAGACGCTATCAA
TACTAAGGACGCCTCTGGCGATTCCATGAACAACTTTGGGGTGTTTTTGTGCCAACAAAAGCGATACGACAAAGCTGAAA
AAATGTTTTTGGCCGCGATAGAAATGCCCAAATATACGCGTACCGCGTCCAGTTATGAAAACTTAGGCATTTGCAGCCGA
GACGCGGGACAAACAGAAAAGGCACGACAGTATTTTCAGATGGCGTTAAAGTATGACCCGAGACGCTCGGTGTCTTTACT
GGAGCTGGCTGAGCTTGGGGTAGAGAAAGGTGATTATGTCGATGCGCAAAACCAATTAGCGCGTTATCACCAAGTGGCAG
CCCAAACTCCAGAGAGTTTAACGCTCGGAATAAAAATTGAGCAGGCGTTGAATGATGATGCTGCTATGAAGCGATTTGGC
ATTTTATTGCTCGCCAAATTCCCAGCATCGCCTCAAGCCAAGCAATACAGAGTTAATTTGCATCAATGA

Upstream 100 bases:

>100_bases
GCGATCGAACCAAGCGTTTAGCAAAAAAACGCATGCAAGAAAATCAGATTTCGGTCACAATGAATTAACTCTTTGTTTGC
ACAGATTTATAGGCTTGCCC

Downstream 100 bases:

>100_bases
AAGATAACGAAATAAACGCGTCAGTAGAACCAGTAGCCGCGAGTGAAGCTGAATCGACGCCTGATGTAACGCTCGGCACT
GTACTCAGAACGGCTCGTGA

Product: type IV pilus biogenesis/stability protein PilW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKHGLSGLSLAIALSLLVTGCVTERTYSGTDIPVSERKLDKVAAARERMQLGLTYLNRGNSEQAKYNLDKAVEYAPELED
VHVAMAYYYQTVGDLVRTEQAYQDAINTKDASGDSMNNFGVFLCQQKRYDKAEKMFLAAIEMPKYTRTASSYENLGICSR
DAGQTEKARQYFQMALKYDPRRSVSLLELAELGVEKGDYVDAQNQLARYHQVAAQTPESLTLGIKIEQALNDDAAMKRFG
ILLLAKFPASPQAKQYRVNLHQ

Sequences:

>Translated_262_residues
MKHGLSGLSLAIALSLLVTGCVTERTYSGTDIPVSERKLDKVAAARERMQLGLTYLNRGNSEQAKYNLDKAVEYAPELED
VHVAMAYYYQTVGDLVRTEQAYQDAINTKDASGDSMNNFGVFLCQQKRYDKAEKMFLAAIEMPKYTRTASSYENLGICSR
DAGQTEKARQYFQMALKYDPRRSVSLLELAELGVEKGDYVDAQNQLARYHQVAAQTPESLTLGIKIEQALNDDAAMKRFG
ILLLAKFPASPQAKQYRVNLHQ
>Mature_262_residues
MKHGLSGLSLAIALSLLVTGCVTERTYSGTDIPVSERKLDKVAAARERMQLGLTYLNRGNSEQAKYNLDKAVEYAPELED
VHVAMAYYYQTVGDLVRTEQAYQDAINTKDASGDSMNNFGVFLCQQKRYDKAEKMFLAAIEMPKYTRTASSYENLGICSR
DAGQTEKARQYFQMALKYDPRRSVSLLELAELGVEKGDYVDAQNQLARYHQVAAQTPESLTLGIKIEQALNDDAAMKRFG
ILLLAKFPASPQAKQYRVNLHQ

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013360
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29344; Mature: 29344

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHGLSGLSLAIALSLLVTGCVTERTYSGTDIPVSERKLDKVAAARERMQLGLTYLNRGN
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
SEQAKYNLDKAVEYAPELEDVHVAMAYYYQTVGDLVRTEQAYQDAINTKDASGDSMNNFG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
VFLCQQKRYDKAEKMFLAAIEMPKYTRTASSYENLGICSRDAGQTEKARQYFQMALKYDP
EEEECCHHCCHHHHHHHHHHCCCCHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
RRSVSLLELAELGVEKGDYVDAQNQLARYHQVAAQTPESLTLGIKIEQALNDDAAMKRFG
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCHHHHHHHH
ILLLAKFPASPQAKQYRVNLHQ
HHEEEECCCCCCCCEEEEECCC
>Mature Secondary Structure
MKHGLSGLSLAIALSLLVTGCVTERTYSGTDIPVSERKLDKVAAARERMQLGLTYLNRGN
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
SEQAKYNLDKAVEYAPELEDVHVAMAYYYQTVGDLVRTEQAYQDAINTKDASGDSMNNFG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
VFLCQQKRYDKAEKMFLAAIEMPKYTRTASSYENLGICSRDAGQTEKARQYFQMALKYDP
EEEECCHHCCHHHHHHHHHHCCCCHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
RRSVSLLELAELGVEKGDYVDAQNQLARYHQVAAQTPESLTLGIKIEQALNDDAAMKRFG
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCHHHHHHHH
ILLLAKFPASPQAKQYRVNLHQ
HHEEEECCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]