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The map label for this gene is ybgA [H]

Identifier: 117919613

GI number: 117919613

Start: 1374850

End: 1375803

Strand: Direct

Name: ybgA [H]

Synonym: Shewana3_1164

Alternate gene names: 117919613

Gene position: 1374850-1375803 (Clockwise)

Preceding gene: 117919611

Following gene: 117919614

Centisome position: 27.65

GC content: 46.02

Gene sequence:

>954_bases
ATGTACAAGTTTAATCCGCAGCGAATTCAAATCGGGATCAGTGCCTGCTTATTAGGGGAGAAGGTGCGCTTTGACGGTGG
GCATAAAAATTCTTCCTATTGTAATCAAGAGATTGCCCCATTTTTTAATTATGTTCCCTTGTGTCCAGAAATGGCGATTG
GCCTAGGTGCACCGCGAAAAAGCATTCGATTAGTGCGCGATGGTGAGCTGATCCGCGTGCAGAGTGGTGATGGCAGCTTA
GATGTCACCGACAAACTCAATCGCTTTAGCGAGCAAAAGGTTGAGGAATTAGGCTTTTTAGGCGGTTACTTACTCTGCGC
TAAATCGCCGACCTGCGGTATGGAGCGGGTGACCGAGTACAAAATTGGCACCAATAATGGCACTAAATCAGGGATTGGAG
TGTTTGCCCGTAAGTTGATGGAGCGTTACCCCTATCTACCGGTTGAAGAAGAAGGTCGTCTGCACGATATGGTGCTGCGG
GAGAACTTTTTTACCCGAGTCTATGCCTATCATGACTGGCACAGAATGTGTCATGAAGGCTTAACTAAGCACAAGCTAGT
CAAGTTTCACTCCCGCTATAAGTATCTGTTGATGGCCCATAGCCCCAAATGGTACCGCGAGCTTGGGCCGATAGTGGCCA
ATATTGAAGACTTAGCTCAAACCGCTGAGCGCTATTTTGCGGGCTTTATGACCGCCTTAAAAATCAATGCCACCCGTCGA
AACCATACCAGCACCTTACAGCATATTCAGGGCTATTTTAAAAAGCATTTGAATAAGGAACAGAAGTTGGAACTGTCTGA
AATGATAATGAAATATCGCCAAGGGCTTCTCCCTTTGCTGGTGCCAATCACCTTGATTAACCACTATTTGCGTCAATTTC
CTACCCCCTATATTGAGGATCAAGTGTACTTAAATCCTCACCCTGAGGAATTAAAGCTGCGCTATGCCTATTAA

Upstream 100 bases:

>100_bases
TTTTAGCGTCAGGAAATTTTTATAAAAATTTGTACAAAAACTTGATCCTTGTACAAGAATGGTCCGTAATATTATTCAAA
GTGATACAAGGAATAGCATT

Downstream 100 bases:

>100_bases
TCACAGGTACTAGCCTAGACCTGCGCTTGAGCGATTAGATAATGCATCAAAATTAACAAGTTAAGTGATGATATGAAACG
AGATGATTCAAAGGTTGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF169; TKP [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSSYCNQEIAPFFNYVPLCPEMAIGLGAPRKSIRLVRDGELIRVQSGDGSL
DVTDKLNRFSEQKVEELGFLGGYLLCAKSPTCGMERVTEYKIGTNNGTKSGIGVFARKLMERYPYLPVEEEGRLHDMVLR
ENFFTRVYAYHDWHRMCHEGLTKHKLVKFHSRYKYLLMAHSPKWYRELGPIVANIEDLAQTAERYFAGFMTALKINATRR
NHTSTLQHIQGYFKKHLNKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIEDQVYLNPHPEELKLRYAY

Sequences:

>Translated_317_residues
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSSYCNQEIAPFFNYVPLCPEMAIGLGAPRKSIRLVRDGELIRVQSGDGSL
DVTDKLNRFSEQKVEELGFLGGYLLCAKSPTCGMERVTEYKIGTNNGTKSGIGVFARKLMERYPYLPVEEEGRLHDMVLR
ENFFTRVYAYHDWHRMCHEGLTKHKLVKFHSRYKYLLMAHSPKWYRELGPIVANIEDLAQTAERYFAGFMTALKINATRR
NHTSTLQHIQGYFKKHLNKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIEDQVYLNPHPEELKLRYAY
>Mature_317_residues
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSSYCNQEIAPFFNYVPLCPEMAIGLGAPRKSIRLVRDGELIRVQSGDGSL
DVTDKLNRFSEQKVEELGFLGGYLLCAKSPTCGMERVTEYKIGTNNGTKSGIGVFARKLMERYPYLPVEEEGRLHDMVLR
ENFFTRVYAYHDWHRMCHEGLTKHKLVKFHSRYKYLLMAHSPKWYRELGPIVANIEDLAQTAERYFAGFMTALKINATRR
NHTSTLQHIQGYFKKHLNKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIEDQVYLNPHPEELKLRYAY

Specific function: Unknown

COG id: COG3272

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786925, Length=159, Percent_Identity=35.8490566037736, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013560 [H]

Pfam domain/function: PF08349 DUF1722 [H]

EC number: NA

Molecular weight: Translated: 36918; Mature: 36918

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSSYCNQEIAPFFNYVPLCPEMAIGLGAPRK
CCCCCCCEEEEEHHHHHHCCEEECCCCCCCCHHHCHHHHHHHHHCCCCHHHHHCCCCCHH
SIRLVRDGELIRVQSGDGSLDVTDKLNRFSEQKVEELGFLGGYLLCAKSPTCGMERVTEY
HEEEEECCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHE
KIGTNNGTKSGIGVFARKLMERYPYLPVEEEGRLHDMVLRENFFTRVYAYHDWHRMCHEG
EECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LTKHKLVKFHSRYKYLLMAHSPKWYRELGPIVANIEDLAQTAERYFAGFMTALKINATRR
CHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEEECCCC
NHTSTLQHIQGYFKKHLNKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIED
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
QVYLNPHPEELKLRYAY
EEEECCCHHHCEEEECC
>Mature Secondary Structure
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSSYCNQEIAPFFNYVPLCPEMAIGLGAPRK
CCCCCCCEEEEEHHHHHHCCEEECCCCCCCCHHHCHHHHHHHHHCCCCHHHHHCCCCCHH
SIRLVRDGELIRVQSGDGSLDVTDKLNRFSEQKVEELGFLGGYLLCAKSPTCGMERVTEY
HEEEEECCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHE
KIGTNNGTKSGIGVFARKLMERYPYLPVEEEGRLHDMVLRENFFTRVYAYHDWHRMCHEG
EECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LTKHKLVKFHSRYKYLLMAHSPKWYRELGPIVANIEDLAQTAERYFAGFMTALKINATRR
CHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEEECCCC
NHTSTLQHIQGYFKKHLNKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIED
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
QVYLNPHPEELKLRYAY
EEEECCCHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6325460; 8905232; 9278503; 8387990 [H]