Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919591

Identifier: 117919591

GI number: 117919591

Start: 1347843

End: 1348136

Strand: Direct

Name: 117919591

Synonym: Shewana3_1142

Alternate gene names: NA

Gene position: 1347843-1348136 (Clockwise)

Preceding gene: 117919590

Following gene: 117919592

Centisome position: 27.11

GC content: 46.6

Gene sequence:

>294_bases
TTGTTTAAATGTGCCTTATCAGGGATTTGCCTTATCTTTTTTCTCTCAAGTTGCGCCCTAGAACCCCCTCAATTACCACG
GCGCATTAACGAAGCCTATGATTTTGAAGTGACTCACTGTGACAGTTTTGCGCTAGTCACTGGTGTAAGTCGCCATGCCA
ATAACCTTGCCGAAGCAAAACAATCCGCCGCCTTACAAGGGGAGGAGTTAGGAGGCACTCATATAGTGTGGTTGCAAACG
GATATGGGCGAACCAACCAAAGTGGTGGCGATAGTGTATAAGTGCCTGCTTTAA

Upstream 100 bases:

>100_bases
TGGTTGTCGTTAAAGGGATGTGAGTTGCTTCACAATTAAGTTGAATCGAATTCGTTATGTTCGCCCGCCTATTTAGGATT
TAACAATTGGATAAACTGTT

Downstream 100 bases:

>100_bases
ATCGGATACCTTAAGCGATGGCTTTCTTACGGGAGTTCAAGCCGATGGCATCCTCAGTTGATGCAGACTAAGCTTAGGAA
GGCGATGGGAACGCTGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MFKCALSGICLIFFLSSCALEPPQLPRRINEAYDFEVTHCDSFALVTGVSRHANNLAEAKQSAALQGEELGGTHIVWLQT
DMGEPTKVVAIVYKCLL

Sequences:

>Translated_97_residues
MFKCALSGICLIFFLSSCALEPPQLPRRINEAYDFEVTHCDSFALVTGVSRHANNLAEAKQSAALQGEELGGTHIVWLQT
DMGEPTKVVAIVYKCLL
>Mature_97_residues
MFKCALSGICLIFFLSSCALEPPQLPRRINEAYDFEVTHCDSFALVTGVSRHANNLAEAKQSAALQGEELGGTHIVWLQT
DMGEPTKVVAIVYKCLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10628; Mature: 10628

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKCALSGICLIFFLSSCALEPPQLPRRINEAYDFEVTHCDSFALVTGVSRHANNLAEAK
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHH
QSAALQGEELGGTHIVWLQTDMGEPTKVVAIVYKCLL
HHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MFKCALSGICLIFFLSSCALEPPQLPRRINEAYDFEVTHCDSFALVTGVSRHANNLAEAK
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHH
QSAALQGEELGGTHIVWLQTDMGEPTKVVAIVYKCLL
HHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA