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The map label for this gene is trpR [C]

Identifier: 117919585

GI number: 117919585

Start: 1340636

End: 1340911

Strand: Direct

Name: trpR [C]

Synonym: Shewana3_1136

Alternate gene names: 117919585

Gene position: 1340636-1340911 (Clockwise)

Preceding gene: 117919583

Following gene: 117919588

Centisome position: 26.96

GC content: 43.48

Gene sequence:

>276_bases
ATGCGAGCCAATTGGGACTTAGTTTTAGAGAAAATCTTGAGCCATGGAAACTATGAAGAACTCTCAGTGTTGTTCCATTT
ATTGCTGACAGAAGAGGAGCGCAGTGCGATCGCGGGACGATTAAAGGTATTTCAATTATTACTCGATGGTGAGATGAGCC
AGCGGCAAATCGCGGCGGAATACGAGGTCAGCATCGCCACGATCACACGCTGTTCAAACTATTTAAAGAATATGGCACCT
AGCCATAGAGAAAAAATTCAACAGCTCATCAAATAA

Upstream 100 bases:

>100_bases
TTTGTCTAGGCGGGAGGGATAAACGTAACAAGTTATTTGTTGGTTGAGTAAATCTGCTAAACTGCCGTTGTAATGCTTAA
ACAATACTACTGGGGCGATT

Downstream 100 bases:

>100_bases
GGTCGCTGTGGTGCCTTTATCCTTAATAGCCTAAAACATTGGGGTGACAGGCAACTTATGACGACGATAAAGCGTACGTC
TTACTAGAATGTAGAAGCTG

Product: Trp operon repressor

Products: NA

Alternate protein names: Trp Repressor

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MRANWDLVLEKILSHGNYEELSVLFHLLLTEEERSAIAGRLKVFQLLLDGEMSQRQIAAEYEVSIATITRCSNYLKNMAP
SHREKIQQLIK

Sequences:

>Translated_91_residues
MRANWDLVLEKILSHGNYEELSVLFHLLLTEEERSAIAGRLKVFQLLLDGEMSQRQIAAEYEVSIATITRCSNYLKNMAP
SHREKIQQLIK
>Mature_91_residues
MRANWDLVLEKILSHGNYEELSVLFHLLLTEEERSAIAGRLKVFQLLLDGEMSQRQIAAEYEVSIATITRCSNYLKNMAP
SHREKIQQLIK

Specific function: This Protein Is An Aporepressor. When Complexed With L- Tryptophan It Binds The Operator Region Of The Trp Operon (5'- ACTAGT-'3') And Prevents The Initiation Of Transcription. The Complex Also Regulates Trp Repressor Biosynthesis By Binding To Its Regula

COG id: COG2973

COG function: function code K; Trp operon repressor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 250-750 50-300 [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10544; Mature: 10544

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRANWDLVLEKILSHGNYEELSVLFHLLLTEEERSAIAGRLKVFQLLLDGEMSQRQIAAE
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YEVSIATITRCSNYLKNMAPSHREKIQQLIK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
>Mature Secondary Structure
MRANWDLVLEKILSHGNYEELSVLFHLLLTEEERSAIAGRLKVFQLLLDGEMSQRQIAAE
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YEVSIATITRCSNYLKNMAPSHREKIQQLIK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA