| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is maeA [H]
Identifier: 117919202
GI number: 117919202
Start: 869557
End: 871245
Strand: Reverse
Name: maeA [H]
Synonym: Shewana3_0750
Alternate gene names: 117919202
Gene position: 871245-869557 (Counterclockwise)
Preceding gene: 117919203
Following gene: 117919199
Centisome position: 17.52
GC content: 49.56
Gene sequence:
>1689_bases ATGGACGATAATAAACGCCCCCTCTATCTTCCGTTTGCAGGACCTGCCATTCTTGAAGCTCCCTTAATTAACAAGGGCAG TGCATTTTCGGAAGAAGAGCGTATTTTCTTTAACCTCGAAGGCTTAGTACCCTACGCCATTGAAACTATTGAAGAACAGG CTTCACGCGCCTACGATCAGTTCAGAAGTTTCAATAACGATCTCGATAAGCACATCTATCTGCGCAACATTCAAGACACC AACGAAACCCTGTTTTATCGTTTAGTGCAAAACCACATCAGCGAAATGATGCCAATTATCTACACCCCGACGGTAGGTTT GGCCTGTGAGCGCTTCTCGAAAAACTATCGCCGTAACCGTGGTCTGTTCATCTCTTACCCGAATAAGGACAGAATCGACG ACATCCTCAATAACTCGACTCGCCAAAAAGTAAAAATCATCGTTGTGACCGACGGTGAGCGCATCTTAGGCTTAGGCGAC CAAGGTATTGGCGGCATGGGGATCCCGATTGGTAAATTGTCACTCTACACCAGCTGTGGTGGGATCAGCCCCGCATACAC ACTGCCAATTACCTTAGACGTAGGTACCGATAATCCACAGTTGCTGGAAGATCCTATGTACATGGGTTGGCGCCATCCGC GTATTGGCGGCGAGGAGTATGCCGAGTTTATCGAAGCCTTTATGCAAGCCGTGCATGTACGTTGGCCAGATACACTGATC CAATTCGAAGACTTTGCCCAAAAGAATGCGATGCCAATCCTTGAGCGTTATAAGGATCGCTACTGCTGCTTTAACGATGA CATTCAAGGTACCGCCGCCGTGACTGTGGGCTCGTTACTCGCCGCCTGTAAAGCCGCGGGCACTGAGCTCAACAAACAAC GTATCGCCTTCTTAGGTGCCGGTAGCGCAGGCTGCGGTATTGCCGAAGCCATCGTTGCGCAAATGGTGTCTGAAGGGATC AGCGATGAGCAAGCCCGCAGCCAAGTCTGCATGGTTGACCGTTGGGGCCTGCTGCTTGACAACATGCCTAACCTGTTGCC ATTCCAACAAAAATTGGCTCAAAAATGTGCCGATATCTGCAACTGGAATAACTTCAGCGACAATATTTCACTGCTCGATG TGGTCAATAACGCTAAACCAACGGTACTGATTGGCGTATCGGGCGCACCAGGTCTGTTTACCGAAGAAATTGTTCGTGCA ATGCATAGCCACTGCGAACGCCCAATTATCTTCCCACTGTCAAACCCCACCAGCCGTGTTGAAGCGACGCCAAAAGACAT TCTGCACTGGACGTCTGGCCAAGCCTTAGTGGCAACGGGTAGCCCGTTTGAACCTGTTGTTGTCGATGGCGAAACCTATG AAATCGCGCAATGTAACAACAGCTTTATCTTCCCTGGTATTGGTTTAGGGGTACTCGCCTCGGGTGCTCGCCATGTCTCC GATGCGATGTTAATGGCATCGAGCCGCGCGCTCGCCGAATGCTCACCGTTAGCCATTAATGGCTCAGGACCACTCCTGCC AAAACTGGAAGATATTCACTCAGTAAGTAAGCATATTGCGTTTGCCGTCGGTAAAGTGGCGATTGAACAAGGCCTATCCT TACCTGCAAGTGATGAGCTGCTGATGCAATCTATCGAAGATAATTTCTGGAAGCCAGAGTATCGCCGTTATAAGCGTACG TCTTTCTAA
Upstream 100 bases:
>100_bases GACACAGGCAACAAAGATCACATTTCATGATAACCTTACGTGACTTACAGCACGTCTCAAGCACGTACCGAACCATTAAA CAATAACTCAAAGGTTACCC
Downstream 100 bases:
>100_bases TATCAGACATTATTCCAATAAAAAGCCCGTCAATCGACGGGCTTTTTATTGGGTCAAACTCACAGCTTAAGGCGCCATCA CCTGTTTAAAGCTGTTGAGC
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MDDNKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDT NETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGD QGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDTLI QFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRIAFLGAGSAGCGIAEAIVAQMVSEGI SDEQARSQVCMVDRWGLLLDNMPNLLPFQQKLAQKCADICNWNNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIVRA MHSHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVS DAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLSLPASDELLMQSIEDNFWKPEYRRYKRT SF
Sequences:
>Translated_562_residues MDDNKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDT NETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGD QGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDTLI QFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRIAFLGAGSAGCGIAEAIVAQMVSEGI SDEQARSQVCMVDRWGLLLDNMPNLLPFQQKLAQKCADICNWNNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIVRA MHSHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVS DAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLSLPASDELLMQSIEDNFWKPEYRRYKRT SF >Mature_562_residues MDDNKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDT NETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGD QGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDTLI QFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRIAFLGAGSAGCGIAEAIVAQMVSEGI SDEQARSQVCMVDRWGLLLDNMPNLLPFQQKLAQKCADICNWNNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIVRA MHSHCERPIIFPLSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVS DAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLSLPASDELLMQSIEDNFWKPEYRRYKRT SF
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=519, Percent_Identity=43.5452793834297, Blast_Score=437, Evalue=1e-122, Organism=Homo sapiens, GI62420882, Length=563, Percent_Identity=41.2078152753108, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI62420880, Length=563, Percent_Identity=41.2078152753108, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI239049447, Length=563, Percent_Identity=41.2078152753108, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI4505145, Length=552, Percent_Identity=42.2101449275362, Blast_Score=431, Evalue=1e-120, Organism=Homo sapiens, GI270265879, Length=463, Percent_Identity=45.5723542116631, Blast_Score=397, Evalue=1e-110, Organism=Escherichia coli, GI87081919, Length=558, Percent_Identity=67.741935483871, Blast_Score=788, Evalue=0.0, Organism=Caenorhabditis elegans, GI17537199, Length=547, Percent_Identity=43.327239488117, Blast_Score=425, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6322823, Length=565, Percent_Identity=43.5398230088496, Blast_Score=444, Evalue=1e-125, Organism=Drosophila melanogaster, GI21356279, Length=519, Percent_Identity=44.7013487475915, Blast_Score=436, Evalue=1e-122, Organism=Drosophila melanogaster, GI281362672, Length=519, Percent_Identity=44.7013487475915, Blast_Score=436, Evalue=1e-122, Organism=Drosophila melanogaster, GI281362674, Length=519, Percent_Identity=44.7013487475915, Blast_Score=436, Evalue=1e-122, Organism=Drosophila melanogaster, GI24646388, Length=512, Percent_Identity=42.7734375, Blast_Score=416, Evalue=1e-116, Organism=Drosophila melanogaster, GI24646386, Length=512, Percent_Identity=42.7734375, Blast_Score=415, Evalue=1e-116, Organism=Drosophila melanogaster, GI281363505, Length=535, Percent_Identity=37.3831775700935, Blast_Score=383, Evalue=1e-106, Organism=Drosophila melanogaster, GI78707236, Length=535, Percent_Identity=37.3831775700935, Blast_Score=383, Evalue=1e-106, Organism=Drosophila melanogaster, GI78707232, Length=509, Percent_Identity=38.1139489194499, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI281363503, Length=543, Percent_Identity=36.8324125230203, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI78707240, Length=516, Percent_Identity=39.922480620155, Blast_Score=370, Evalue=1e-102, Organism=Drosophila melanogaster, GI78707242, Length=537, Percent_Identity=39.1061452513966, Blast_Score=370, Evalue=1e-102, Organism=Drosophila melanogaster, GI78707238, Length=537, Percent_Identity=39.1061452513966, Blast_Score=370, Evalue=1e-102, Organism=Drosophila melanogaster, GI19922384, Length=543, Percent_Identity=29.8342541436464, Blast_Score=249, Evalue=3e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 62188; Mature: 62188
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDNKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQ CCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH FRSFNNDLDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNR HHHHCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCC GLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCG CEEEECCCCHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEECCC GISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDTLI CCCCCEEEEEEEEECCCCHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH QFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRIAFLGA HHHHHHHCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GSAGCGIAEAIVAQMVSEGISDEQARSQVCMVDRWGLLLDNMPNLLPFQQKLAQKCADIC CCCCCHHHHHHHHHHHHCCCCCHHHHHCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHH NWNNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIVRAMHSHCERPIIFPLSNPTSRV CCCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC EATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVS CCCHHHHHEECCCCEEEECCCCCCCEEECCCEEEEEECCCCEECCCCCHHHHHCCHHHHH DAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLSLPASDEL HHHHHHCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LMQSIEDNFWKPEYRRYKRTSF HHHHHHHCCCCCHHHHHHCCCC >Mature Secondary Structure MDDNKRPLYLPFAGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQ CCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH FRSFNNDLDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNR HHHHCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCC GLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCG CEEEECCCCHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEECCC GISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPDTLI CCCCCEEEEEEEEECCCCHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH QFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRIAFLGA HHHHHHHCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GSAGCGIAEAIVAQMVSEGISDEQARSQVCMVDRWGLLLDNMPNLLPFQQKLAQKCADIC CCCCCHHHHHHHHHHHHCCCCCHHHHHCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHH NWNNFSDNISLLDVVNNAKPTVLIGVSGAPGLFTEEIVRAMHSHCERPIIFPLSNPTSRV CCCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC EATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQCNNSFIFPGIGLGVLASGARHVS CCCHHHHHEECCCCEEEECCCCCCCEEECCCEEEEEECCCCEECCCCCHHHHHCCHHHHH DAMLMASSRALAECSPLAINGSGPLLPKLEDIHSVSKHIAFAVGKVAIEQGLSLPASDEL HHHHHHCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LMQSIEDNFWKPEYRRYKRTSF HHHHHHHCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA