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The map label for this gene is 117919162

Identifier: 117919162

GI number: 117919162

Start: 825028

End: 825348

Strand: Reverse

Name: 117919162

Synonym: Shewana3_0710

Alternate gene names: NA

Gene position: 825348-825028 (Counterclockwise)

Preceding gene: 117919163

Following gene: 117919161

Centisome position: 16.6

GC content: 48.6

Gene sequence:

>321_bases
ATGAACAAGAAAAAACACCTATTTGCTGAGGACAGTTTCTTTCTGTCACGCCGTAAGTTTATGGCCGTAGGCGCTGCCTT
TGTCGCCGCCTTAGCCATTCCTATTGGTTGGTTTAGCAGCAAGCTTGAGCGCCGCAATGAGTACATAAAGGCCAGAAGCC
AAGGGTTATATAAGGACGACAGCCTAGCGAAAAAACGTGTTAGCCACGCCAACCCCGCGGTAGAGAAATACTACAAAGAA
TTCGGTGGCGAGCCTTTAGGACATATGTCCCATGAGCTACTGCACACCCACTTTGTCGACCGCACCAAATTAAGCTCTTG
A

Upstream 100 bases:

>100_bases
CGAAGTGATGAACTGCGCTGGCGGTTGCGTCAACGGTGGAGGCCAACCTATTGAAGGTAAAGGCTCTTCTTGGCTAGGTA
ACATTTAACGGGAAACAGAT

Downstream 100 bases:

>100_bases
TTGGAGATGAAAAATGCATCAAGAACATGATATGAGACCCATTTTAAAACATCCGTTAAACGTCAGGATCTTCCACTACA
TTCTGCTACTGAGCTTTTTG

Product: iron hydrogenase, small subunit

Products: NA

Alternate protein names: NADH Dehydrogenase; Periplasmic Fe Hydrogenase Small Subunit

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MNKKKHLFAEDSFFLSRRKFMAVGAAFVAALAIPIGWFSSKLERRNEYIKARSQGLYKDDSLAKKRVSHANPAVEKYYKE
FGGEPLGHMSHELLHTHFVDRTKLSS

Sequences:

>Translated_106_residues
MNKKKHLFAEDSFFLSRRKFMAVGAAFVAALAIPIGWFSSKLERRNEYIKARSQGLYKDDSLAKKRVSHANPAVEKYYKE
FGGEPLGHMSHELLHTHFVDRTKLSS
>Mature_106_residues
MNKKKHLFAEDSFFLSRRKFMAVGAAFVAALAIPIGWFSSKLERRNEYIKARSQGLYKDDSLAKKRVSHANPAVEKYYKE
FGGEPLGHMSHELLHTHFVDRTKLSS

Specific function: Unknown

COG id: COG4624

COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12172; Mature: 12172

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKKHLFAEDSFFLSRRKFMAVGAAFVAALAIPIGWFSSKLERRNEYIKARSQGLYKDD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
SLAKKRVSHANPAVEKYYKEFGGEPLGHMSHELLHTHFVDRTKLSS
HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKKKHLFAEDSFFLSRRKFMAVGAAFVAALAIPIGWFSSKLERRNEYIKARSQGLYKDD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
SLAKKRVSHANPAVEKYYKEFGGEPLGHMSHELLHTHFVDRTKLSS
HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA