Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117919116

Identifier: 117919116

GI number: 117919116

Start: 785789

End: 786022

Strand: Reverse

Name: 117919116

Synonym: Shewana3_0664

Alternate gene names: NA

Gene position: 786022-785789 (Counterclockwise)

Preceding gene: 117919119

Following gene: 117919113

Centisome position: 15.81

GC content: 43.16

Gene sequence:

>234_bases
ATGGGAATCGCCAATCATAGTCTTAAACCTGACGTTATTTTTGAAGTGAAAGTCAAAGGCAGATTACTCTCTGATGTCGC
ACGACAGTACGGTATTTCGGCTAAAGCGGTTTACCAATGGGTAAGGGAAAGTGAGCAACAGCCGCAGCAAAGGGAGTGCG
CTTTAATCTCTGAAATTGCGCAGTTGCAGAAACGTATTAAACAGCTAAACAGTGAATTACGCACTATAGGTTGA

Upstream 100 bases:

>100_bases
AGGACATAGCCAGTGGGATATAGAACAGCGTCATTAATCACCAAGGAAAGCACCGAAAGAACCAGCAAGCAGACAGAACA
TAGAGTAAGAGGGATAACCC

Downstream 100 bases:

>100_bases
GGTAACCTCGCCCAGTGCCCTTATCGACAAGGCCGGACCCCATTGCATATTGCCCTGTAGGTCTAACGCGGTATGAAAGT
TGTGCTAAAAACAATAATAA

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MGIANHSLKPDVIFEVKVKGRLLSDVARQYGISAKAVYQWVRESEQQPQQRECALISEIAQLQKRIKQLNSELRTIG

Sequences:

>Translated_77_residues
MGIANHSLKPDVIFEVKVKGRLLSDVARQYGISAKAVYQWVRESEQQPQQRECALISEIAQLQKRIKQLNSELRTIG
>Mature_76_residues
GIANHSLKPDVIFEVKVKGRLLSDVARQYGISAKAVYQWVRESEQQPQQRECALISEIAQLQKRIKQLNSELRTIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8793; Mature: 8662

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIANHSLKPDVIFEVKVKGRLLSDVARQYGISAKAVYQWVRESEQQPQQRECALISEIA
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
QLQKRIKQLNSELRTIG
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GIANHSLKPDVIFEVKVKGRLLSDVARQYGISAKAVYQWVRESEQQPQQRECALISEIA
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
QLQKRIKQLNSELRTIG
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA