| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117919116
Identifier: 117919116
GI number: 117919116
Start: 785789
End: 786022
Strand: Reverse
Name: 117919116
Synonym: Shewana3_0664
Alternate gene names: NA
Gene position: 786022-785789 (Counterclockwise)
Preceding gene: 117919119
Following gene: 117919113
Centisome position: 15.81
GC content: 43.16
Gene sequence:
>234_bases ATGGGAATCGCCAATCATAGTCTTAAACCTGACGTTATTTTTGAAGTGAAAGTCAAAGGCAGATTACTCTCTGATGTCGC ACGACAGTACGGTATTTCGGCTAAAGCGGTTTACCAATGGGTAAGGGAAAGTGAGCAACAGCCGCAGCAAAGGGAGTGCG CTTTAATCTCTGAAATTGCGCAGTTGCAGAAACGTATTAAACAGCTAAACAGTGAATTACGCACTATAGGTTGA
Upstream 100 bases:
>100_bases AGGACATAGCCAGTGGGATATAGAACAGCGTCATTAATCACCAAGGAAAGCACCGAAAGAACCAGCAAGCAGACAGAACA TAGAGTAAGAGGGATAACCC
Downstream 100 bases:
>100_bases GGTAACCTCGCCCAGTGCCCTTATCGACAAGGCCGGACCCCATTGCATATTGCCCTGTAGGTCTAACGCGGTATGAAAGT TGTGCTAAAAACAATAATAA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MGIANHSLKPDVIFEVKVKGRLLSDVARQYGISAKAVYQWVRESEQQPQQRECALISEIAQLQKRIKQLNSELRTIG
Sequences:
>Translated_77_residues MGIANHSLKPDVIFEVKVKGRLLSDVARQYGISAKAVYQWVRESEQQPQQRECALISEIAQLQKRIKQLNSELRTIG >Mature_76_residues GIANHSLKPDVIFEVKVKGRLLSDVARQYGISAKAVYQWVRESEQQPQQRECALISEIAQLQKRIKQLNSELRTIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8793; Mature: 8662
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIANHSLKPDVIFEVKVKGRLLSDVARQYGISAKAVYQWVRESEQQPQQRECALISEIA CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH QLQKRIKQLNSELRTIG HHHHHHHHHHHHHHCCC >Mature Secondary Structure GIANHSLKPDVIFEVKVKGRLLSDVARQYGISAKAVYQWVRESEQQPQQRECALISEIA CCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH QLQKRIKQLNSELRTIG HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA