Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919113

Identifier: 117919113

GI number: 117919113

Start: 782844

End: 783428

Strand: Reverse

Name: 117919113

Synonym: Shewana3_0661

Alternate gene names: NA

Gene position: 783428-782844 (Counterclockwise)

Preceding gene: 117919116

Following gene: 117919111

Centisome position: 15.76

GC content: 47.52

Gene sequence:

>585_bases
ATGCTGATGCCATTTTGTGACTTGTCAGATTTTAGAATGCGCTACCTTAATTTTGCTTTGGCTCTTACCGCCCTCTCCCT
CACCCAATGCACTAGCCTCTCACTCGAGGAATGTCGAGATAATGACTGGTACGCCACGGGTTTAGCCGACGGTAATCGGG
GCGCTAACGCGAGCCAGCTCAATCAGTATCAGCAGGATTGTCGTGAGTTTAATCTCAGAGTGGATGCAGCCCAGTGGCAA
CAGGGATATCAGCAGGGACTTATCAGCTATTGTCTGCCCGAAAATGGCTACCGTGTAGGTTTAGCTGGAGAGAATTACTA
TGGCGTTTGTAGCAACAATCAGTTTGTTGAGCGTTATAACCAAGGACACGAGCAGTATCTGGTGAATAAACGTCTAGCCG
AAATTGCCGACCGCTTAAATGCCATCGATAGCGAGATCAGTAGCATCAACAACAAGCTAAACAACCTCACCGATAAAGCC
GAACTGCTAAAGCAAAAGAACACCCTATTGAACGAGAAAAACCATCTCCTCGACGAAAGACTACGCCTTCGCCGAGGTGA
TATCCGCTTTGAGTTTCGCTTCTAA

Upstream 100 bases:

>100_bases
GTAAGTTGTGACTCAGATAGGAAAAGTTGCCCTGAATTCTGCGCCAGCTAACCGTATTCGCGGCGAAATATAGCGCTAGC
TCTCCCCTTCCCTAGGCTTT

Downstream 100 bases:

>100_bases
GCGTTCGTCTCAGAGTTACTTGGAGGATAAGCCATCACTTAGAGATGGCTTCTTTGGTACTAATAATACTGATTTTGTTG
GCGACTTTAATCTTGTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MLMPFCDLSDFRMRYLNFALALTALSLTQCTSLSLEECRDNDWYATGLADGNRGANASQLNQYQQDCREFNLRVDAAQWQ
QGYQQGLISYCLPENGYRVGLAGENYYGVCSNNQFVERYNQGHEQYLVNKRLAEIADRLNAIDSEISSINNKLNNLTDKA
ELLKQKNTLLNEKNHLLDERLRLRRGDIRFEFRF

Sequences:

>Translated_194_residues
MLMPFCDLSDFRMRYLNFALALTALSLTQCTSLSLEECRDNDWYATGLADGNRGANASQLNQYQQDCREFNLRVDAAQWQ
QGYQQGLISYCLPENGYRVGLAGENYYGVCSNNQFVERYNQGHEQYLVNKRLAEIADRLNAIDSEISSINNKLNNLTDKA
ELLKQKNTLLNEKNHLLDERLRLRRGDIRFEFRF
>Mature_194_residues
MLMPFCDLSDFRMRYLNFALALTALSLTQCTSLSLEECRDNDWYATGLADGNRGANASQLNQYQQDCREFNLRVDAAQWQ
QGYQQGLISYCLPENGYRVGLAGENYYGVCSNNQFVERYNQGHEQYLVNKRLAEIADRLNAIDSEISSINNKLNNLTDKA
ELLKQKNTLLNEKNHLLDERLRLRRGDIRFEFRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22528; Mature: 22528

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMPFCDLSDFRMRYLNFALALTALSLTQCTSLSLEECRDNDWYATGLADGNRGANASQL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCHHHH
NQYQQDCREFNLRVDAAQWQQGYQQGLISYCLPENGYRVGLAGENYYGVCSNNQFVERYN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCHHHHHHC
QGHEQYLVNKRLAEIADRLNAIDSEISSINNKLNNLTDKAELLKQKNTLLNEKNHLLDER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLRRGDIRFEFRF
HHHHCCCEEEEEEC
>Mature Secondary Structure
MLMPFCDLSDFRMRYLNFALALTALSLTQCTSLSLEECRDNDWYATGLADGNRGANASQL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCHHHH
NQYQQDCREFNLRVDAAQWQQGYQQGLISYCLPENGYRVGLAGENYYGVCSNNQFVERYN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCHHHHHHC
QGHEQYLVNKRLAEIADRLNAIDSEISSINNKLNNLTDKAELLKQKNTLLNEKNHLLDER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLRRGDIRFEFRF
HHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA