| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919113
Identifier: 117919113
GI number: 117919113
Start: 782844
End: 783428
Strand: Reverse
Name: 117919113
Synonym: Shewana3_0661
Alternate gene names: NA
Gene position: 783428-782844 (Counterclockwise)
Preceding gene: 117919116
Following gene: 117919111
Centisome position: 15.76
GC content: 47.52
Gene sequence:
>585_bases ATGCTGATGCCATTTTGTGACTTGTCAGATTTTAGAATGCGCTACCTTAATTTTGCTTTGGCTCTTACCGCCCTCTCCCT CACCCAATGCACTAGCCTCTCACTCGAGGAATGTCGAGATAATGACTGGTACGCCACGGGTTTAGCCGACGGTAATCGGG GCGCTAACGCGAGCCAGCTCAATCAGTATCAGCAGGATTGTCGTGAGTTTAATCTCAGAGTGGATGCAGCCCAGTGGCAA CAGGGATATCAGCAGGGACTTATCAGCTATTGTCTGCCCGAAAATGGCTACCGTGTAGGTTTAGCTGGAGAGAATTACTA TGGCGTTTGTAGCAACAATCAGTTTGTTGAGCGTTATAACCAAGGACACGAGCAGTATCTGGTGAATAAACGTCTAGCCG AAATTGCCGACCGCTTAAATGCCATCGATAGCGAGATCAGTAGCATCAACAACAAGCTAAACAACCTCACCGATAAAGCC GAACTGCTAAAGCAAAAGAACACCCTATTGAACGAGAAAAACCATCTCCTCGACGAAAGACTACGCCTTCGCCGAGGTGA TATCCGCTTTGAGTTTCGCTTCTAA
Upstream 100 bases:
>100_bases GTAAGTTGTGACTCAGATAGGAAAAGTTGCCCTGAATTCTGCGCCAGCTAACCGTATTCGCGGCGAAATATAGCGCTAGC TCTCCCCTTCCCTAGGCTTT
Downstream 100 bases:
>100_bases GCGTTCGTCTCAGAGTTACTTGGAGGATAAGCCATCACTTAGAGATGGCTTCTTTGGTACTAATAATACTGATTTTGTTG GCGACTTTAATCTTGTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MLMPFCDLSDFRMRYLNFALALTALSLTQCTSLSLEECRDNDWYATGLADGNRGANASQLNQYQQDCREFNLRVDAAQWQ QGYQQGLISYCLPENGYRVGLAGENYYGVCSNNQFVERYNQGHEQYLVNKRLAEIADRLNAIDSEISSINNKLNNLTDKA ELLKQKNTLLNEKNHLLDERLRLRRGDIRFEFRF
Sequences:
>Translated_194_residues MLMPFCDLSDFRMRYLNFALALTALSLTQCTSLSLEECRDNDWYATGLADGNRGANASQLNQYQQDCREFNLRVDAAQWQ QGYQQGLISYCLPENGYRVGLAGENYYGVCSNNQFVERYNQGHEQYLVNKRLAEIADRLNAIDSEISSINNKLNNLTDKA ELLKQKNTLLNEKNHLLDERLRLRRGDIRFEFRF >Mature_194_residues MLMPFCDLSDFRMRYLNFALALTALSLTQCTSLSLEECRDNDWYATGLADGNRGANASQLNQYQQDCREFNLRVDAAQWQ QGYQQGLISYCLPENGYRVGLAGENYYGVCSNNQFVERYNQGHEQYLVNKRLAEIADRLNAIDSEISSINNKLNNLTDKA ELLKQKNTLLNEKNHLLDERLRLRRGDIRFEFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22528; Mature: 22528
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMPFCDLSDFRMRYLNFALALTALSLTQCTSLSLEECRDNDWYATGLADGNRGANASQL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCHHHH NQYQQDCREFNLRVDAAQWQQGYQQGLISYCLPENGYRVGLAGENYYGVCSNNQFVERYN HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCHHHHHHC QGHEQYLVNKRLAEIADRLNAIDSEISSINNKLNNLTDKAELLKQKNTLLNEKNHLLDER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLRRGDIRFEFRF HHHHCCCEEEEEEC >Mature Secondary Structure MLMPFCDLSDFRMRYLNFALALTALSLTQCTSLSLEECRDNDWYATGLADGNRGANASQL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCHHHH NQYQQDCREFNLRVDAAQWQQGYQQGLISYCLPENGYRVGLAGENYYGVCSNNQFVERYN HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCHHHHHHC QGHEQYLVNKRLAEIADRLNAIDSEISSINNKLNNLTDKAELLKQKNTLLNEKNHLLDER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLRRGDIRFEFRF HHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA