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The map label for this gene is 117919099

Identifier: 117919099

GI number: 117919099

Start: 763691

End: 764680

Strand: Reverse

Name: 117919099

Synonym: Shewana3_0647

Alternate gene names: NA

Gene position: 764680-763691 (Counterclockwise)

Preceding gene: 117919100

Following gene: 117919098

Centisome position: 15.38

GC content: 41.21

Gene sequence:

>990_bases
ATGATTCTAAAAACTAAAACACTGCAAAATACCCAAACACCACAAACTATTGCGGGTCAAAAACAAGAACAGGATGTTGC
CTTTTATCTGCGCCGCGCTTTCAAAGATCATCCAGAAGTACTCGTTATCAATGATTTTCGATTCACCTTTAACGGCGAAA
CAGCTCAAATTGATCACTTAATTATTTATCCATACGGCTTTGTTTTAATTGAGTCTAAAAGCATAAAAGGTCATGTGGAT
GTAAACCAACATGGCGAATGGACTCGCAGTCACGGCAATAACTGGTTTGGTATGCCATCACCAATTAAGCAAGTTGAACT
GCAACAATCGCTGCTTAAAGAGATGCTAAAACAGCATCGAAGTGAAATTCTCGGTAAGTTACTCGGGATAAAACAGCAAG
GTTTCGGTATGCGTTGCTGGGATCATTTATGCGCGGTCTCAAGCGATGCCGTGATCAATAGAGAAACGATGCCTGCGGCA
GTTTCAGAGCAGTTAGTTAAGACAGAGTTTTTAGTCGAGAAGCTTGAAAAGATCATGAATCTTAAAAGCAAATTCTTCCG
AATTATTAATGTGAGTGATACCCGTCCAGACTTTAATCAAGAAGAACTGAATTCAATCGCTAAGTTCTTAATCGATCGCC
ATCTAGACCCATCTCAAGCTACGAGTGAAATAACGTCCGTACAAACACCACAAGTCAAAGAACCTGTTGCCTCCTTTGCC
GTTAACAAAGTGGCGGAAGCGAAAAACCCTGCAATAGCACAACCCACAACTAACAGCATCCTTCGCTGCAAACATTGTGG
CGAATCAACAAACTACACCCCGATGTACGGTAAGTTTGGTTACTACATAAAATGCAATCAATGCACCAAAAACACGCCAA
TGAAACAAGCATGCCCAGAGTGCCAAAGCAGACAAACAAGAGTAATCAAGGCAAAAGATAGCTATACACTACGGTGCCAA
GATTGCAGTCATAGCTCAGAAGTGATTTAA

Upstream 100 bases:

>100_bases
TCAACGTTAACCTTTAGCGATTTTTATCTTTATCTTTCAATGGCACAGTGGGTATTATGAAACCGATTATTATCAAGTTA
TGAATGGACGCTGTTGATAA

Downstream 100 bases:

>100_bases
AAGTTGGTGAAAATTTGCTCTCAGTTACATTTTAAAGGTAAAGGTTTAAACCATGAAAAAAATAATGAGATAAACGCACA
CATGCACTAATAAAAAGTAG

Product: NERD domain-containing protein

Products: NA

Alternate protein names: Orphan Protein; NERD Domain Protein

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MILKTKTLQNTQTPQTIAGQKQEQDVAFYLRRAFKDHPEVLVINDFRFTFNGETAQIDHLIIYPYGFVLIESKSIKGHVD
VNQHGEWTRSHGNNWFGMPSPIKQVELQQSLLKEMLKQHRSEILGKLLGIKQQGFGMRCWDHLCAVSSDAVINRETMPAA
VSEQLVKTEFLVEKLEKIMNLKSKFFRIINVSDTRPDFNQEELNSIAKFLIDRHLDPSQATSEITSVQTPQVKEPVASFA
VNKVAEAKNPAIAQPTTNSILRCKHCGESTNYTPMYGKFGYYIKCNQCTKNTPMKQACPECQSRQTRVIKAKDSYTLRCQ
DCSHSSEVI

Sequences:

>Translated_329_residues
MILKTKTLQNTQTPQTIAGQKQEQDVAFYLRRAFKDHPEVLVINDFRFTFNGETAQIDHLIIYPYGFVLIESKSIKGHVD
VNQHGEWTRSHGNNWFGMPSPIKQVELQQSLLKEMLKQHRSEILGKLLGIKQQGFGMRCWDHLCAVSSDAVINRETMPAA
VSEQLVKTEFLVEKLEKIMNLKSKFFRIINVSDTRPDFNQEELNSIAKFLIDRHLDPSQATSEITSVQTPQVKEPVASFA
VNKVAEAKNPAIAQPTTNSILRCKHCGESTNYTPMYGKFGYYIKCNQCTKNTPMKQACPECQSRQTRVIKAKDSYTLRCQ
DCSHSSEVI
>Mature_329_residues
MILKTKTLQNTQTPQTIAGQKQEQDVAFYLRRAFKDHPEVLVINDFRFTFNGETAQIDHLIIYPYGFVLIESKSIKGHVD
VNQHGEWTRSHGNNWFGMPSPIKQVELQQSLLKEMLKQHRSEILGKLLGIKQQGFGMRCWDHLCAVSSDAVINRETMPAA
VSEQLVKTEFLVEKLEKIMNLKSKFFRIINVSDTRPDFNQEELNSIAKFLIDRHLDPSQATSEITSVQTPQVKEPVASFA
VNKVAEAKNPAIAQPTTNSILRCKHCGESTNYTPMYGKFGYYIKCNQCTKNTPMKQACPECQSRQTRVIKAKDSYTLRCQ
DCSHSSEVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37490; Mature: 37490

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKTKTLQNTQTPQTIAGQKQEQDVAFYLRRAFKDHPEVLVINDFRFTFNGETAQIDHL
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECEEEEECCCEEEEEEE
IIYPYGFVLIESKSIKGHVDVNQHGEWTRSHGNNWFGMPSPIKQVELQQSLLKEMLKQHR
EEEECEEEEEECCCCCEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SEILGKLLGIKQQGFGMRCWDHLCAVSSDAVINRETMPAAVSEQLVKTEFLVEKLEKIMN
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKSKFFRIINVSDTRPDFNQEELNSIAKFLIDRHLDPSQATSEITSVQTPQVKEPVASFA
HHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH
VNKVAEAKNPAIAQPTTNSILRCKHCGESTNYTPMYGKFGYYIKCNQCTKNTPMKQACPE
HHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCHH
CQSRQTRVIKAKDSYTLRCQDCSHSSEVI
HHCCCCEEEEECCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MILKTKTLQNTQTPQTIAGQKQEQDVAFYLRRAFKDHPEVLVINDFRFTFNGETAQIDHL
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECEEEEECCCEEEEEEE
IIYPYGFVLIESKSIKGHVDVNQHGEWTRSHGNNWFGMPSPIKQVELQQSLLKEMLKQHR
EEEECEEEEEECCCCCEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SEILGKLLGIKQQGFGMRCWDHLCAVSSDAVINRETMPAAVSEQLVKTEFLVEKLEKIMN
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKSKFFRIINVSDTRPDFNQEELNSIAKFLIDRHLDPSQATSEITSVQTPQVKEPVASFA
HHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHH
VNKVAEAKNPAIAQPTTNSILRCKHCGESTNYTPMYGKFGYYIKCNQCTKNTPMKQACPE
HHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCHH
CQSRQTRVIKAKDSYTLRCQDCSHSSEVI
HHCCCCEEEEECCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA