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The map label for this gene is bdlA [H]

Identifier: 117919084

GI number: 117919084

Start: 742284

End: 743582

Strand: Reverse

Name: bdlA [H]

Synonym: Shewana3_0632

Alternate gene names: 117919084

Gene position: 743582-742284 (Counterclockwise)

Preceding gene: 117919085

Following gene: 117919072

Centisome position: 14.95

GC content: 51.19

Gene sequence:

>1299_bases
GTGTTTAATTCTTCACTACGTAAAGACCTCGCAGAAAGCGAAACCAAACGCAGGGAAGCCGAGGCCGTTGTCGATTCAAT
CAAGGCGAGTATCGCGACGATTGAGTTTACCCCCGATGGCATCATCCTCGATGCCAATCCCCTGTTTTTGAAGGCTGTAG
GCTACTCACTGGACGAGATTGTCGGTAAACACCATAAATTATTTTGCGCCGAATACTATGTAAATACCTCGGAATATCAA
CAGTTTTGGCGCGAATTAAAGCAAGGACAGGCGAAGGAAGGCAAATTCCCCCGCGTACACAAGAATGGTCAAGAGATCTG
GCTCAGGGCGACCTATTTCCCCATCAAGCTGGATGGCAAAATCACTAAGATCATGAAAACTGCGGCGGTGATCACCGAGG
ATAAATATCAGCTAGATGCTCAGGCGGCGCTGTTTAGCGCCCTGCAAAAATCCCAGGCGATCATCGAGTTCAGCCCCGAG
GGCAATATCCTCAATGCCAATGCTAACTTCCTCAGAACCATGGGATATAGCAAGGAGCAACTCCAAGGCAAGCATCACCG
CCTGTTCTGCTTCGATAACTTCTATCAGGATAATCCCCATTTTTGGGATGACCTGCGACGTGGGCAATACAAGAAAGGCC
TATTCCAACGTAAAAATGCCTATGGGGATTCGATTTGGCTTGAGGCCGTCTACAACCCTGTGATGGATGATCACGGCAAA
GTGGTAAAGGTAATCAAGTTTGCCAGCGACATAACCCAGAGAATTATCAAGAGCCATGCGATTCGGGATGCGGCCAATAT
CGCCCATGCCACCTCGCAGAGCACGGTTGAACAGGCTAACCGCGGCGTGCAGTTACTCGATGCGACGGTAAACACCTCAA
ACGCGATTGCGGCGCAGACCCATAAAACCACAGAGTCTATGTTGAAACTCAACGAGCAATCTCAAAGTATTCAAGCAATT
GTGGCAACAATCAGTGCCATTGCCGATCAAACCAATCTACTGGCCCTCAACGCCGCCATCGAAGCTGCCCGCGCGGGCGA
ACAAGGCCGAGGCTTTGCCGTAGTGGCCGATGAGGTGCGCCAATTAGCGGCGAGAACCAGTAAATCGACCGGCGAAATCG
CCGCTGTGGTCGATAAGAACAGCCAACTGACGGCCAGTGCCACCAGCATGATGAATGAGGTTGAGCGCATCGCCGAGGAA
GGCAAACAGCAATTAGCGGAAGTCACCGCCGTGATGGGCGATATTCGCACCGGCGCGGAGAATGTCGCCGAGACAGTCTC
GCAACTTTCTATTGATTAA

Upstream 100 bases:

>100_bases
TGCACTATGCCGAACGCTAAGAGCCTAATGCTATGTGCCTATTGCTCAGCTTAGGCTATTAACGCCGTCTTTGAGTTAAC
CCACTCATCAGGAGTATTCA

Downstream 100 bases:

>100_bases
CCCATTCTGACCAAGCGTTAAGGGATAAGCGTGACGCTTAAGCTAAAGGCTAAATTGCATGGCTGAGCGAATAATTGAAG
TGGGAAAACTGCGAAAGAAA

Product: methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MFNSSLRKDLAESETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEIVGKHHKLFCAEYYVNTSEYQ
QFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLDGKITKIMKTAAVITEDKYQLDAQAALFSALQKSQAIIEFSPE
GNILNANANFLRTMGYSKEQLQGKHHRLFCFDNFYQDNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGK
VVKVIKFASDITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAIAAQTHKTTESMLKLNEQSQSIQAI
VATISAIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAARTSKSTGEIAAVVDKNSQLTASATSMMNEVERIAEE
GKQQLAEVTAVMGDIRTGAENVAETVSQLSID

Sequences:

>Translated_432_residues
MFNSSLRKDLAESETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEIVGKHHKLFCAEYYVNTSEYQ
QFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLDGKITKIMKTAAVITEDKYQLDAQAALFSALQKSQAIIEFSPE
GNILNANANFLRTMGYSKEQLQGKHHRLFCFDNFYQDNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGK
VVKVIKFASDITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAIAAQTHKTTESMLKLNEQSQSIQAI
VATISAIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAARTSKSTGEIAAVVDKNSQLTASATSMMNEVERIAEE
GKQQLAEVTAVMGDIRTGAENVAETVSQLSID
>Mature_432_residues
MFNSSLRKDLAESETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEIVGKHHKLFCAEYYVNTSEYQ
QFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLDGKITKIMKTAAVITEDKYQLDAQAALFSALQKSQAIIEFSPE
GNILNANANFLRTMGYSKEQLQGKHHRLFCFDNFYQDNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGK
VVKVIKFASDITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAIAAQTHKTTESMLKLNEQSQSIQAI
VATISAIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAARTSKSTGEIAAVVDKNSQLTASATSMMNEVERIAEE
GKQQLAEVTAVMGDIRTGAENVAETVSQLSID

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=176, Percent_Identity=37.5, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788194, Length=167, Percent_Identity=36.5269461077844, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI2367378, Length=177, Percent_Identity=37.2881355932203, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787690, Length=177, Percent_Identity=35.5932203389831, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1789453, Length=126, Percent_Identity=41.2698412698413, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 47908; Mature: 47908

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNSSLRKDLAESETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCCCCEEHHHCCCHHHH
VGKHHKLFCAEYYVNTSEYQQFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLDGK
HCCHHHEEEHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCH
ITKIMKTAAVITEDKYQLDAQAALFSALQKSQAIIEFSPEGNILNANANFLRTMGYSKEQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCHHHHHCCCCHHH
LQGKHHRLFCFDNFYQDNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGK
HCCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH
VVKVIKFASDITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAIAAQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEHHH
HKTTESMLKLNEQSQSIQAIVATISAIADQTNLLALNAAIEAARAGEQGRGFAVVADEVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEHHHHHH
QLAARTSKSTGEIAAVVDKNSQLTASATSMMNEVERIAEEGKQQLAEVTAVMGDIRTGAE
HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
NVAETVSQLSID
HHHHHHHHHCCC
>Mature Secondary Structure
MFNSSLRKDLAESETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCCCCEEHHHCCCHHHH
VGKHHKLFCAEYYVNTSEYQQFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLDGK
HCCHHHEEEHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCH
ITKIMKTAAVITEDKYQLDAQAALFSALQKSQAIIEFSPEGNILNANANFLRTMGYSKEQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCHHHHHCCCCHHH
LQGKHHRLFCFDNFYQDNPHFWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMDDHGK
HCCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH
VVKVIKFASDITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAIAAQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEHHH
HKTTESMLKLNEQSQSIQAIVATISAIADQTNLLALNAAIEAARAGEQGRGFAVVADEVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEHHHHHH
QLAARTSKSTGEIAAVVDKNSQLTASATSMMNEVERIAEEGKQQLAEVTAVMGDIRTGAE
HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
NVAETVSQLSID
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]