| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117919005
Identifier: 117919005
GI number: 117919005
Start: 645579
End: 645887
Strand: Reverse
Name: 117919005
Synonym: Shewana3_0552
Alternate gene names: NA
Gene position: 645887-645579 (Counterclockwise)
Preceding gene: 117919007
Following gene: 117919004
Centisome position: 12.99
GC content: 44.01
Gene sequence:
>309_bases ATGAAATTCCCCGTTGTACCCGTGTTTGTGTTAATCCTCTTTACATGCTTTGCCAGCGCCATTTGGTTTATCTCCTCGGG AGAGAAAGACACGCGCCCCGAAACTTGGTCATCCTTTATTTATACCCATGGTTATGATTCTGGGAAGTATAAGAAAATGG ATAATTTCGACAGCTATGAAGCCTGTCGTGACTATGCCAAAGAGCAATCTTCCTTTTACGATAATGTGCCTTGGGAATGT GGTCTAAAGTGCGGCTTCGATTCCCGTAAACAGGGTTTTCAATGCCAAGAGATGCGAAACGAGCAGTAA
Upstream 100 bases:
>100_bases ACCAAACGAGTGCAAAGTTATTAATTTGTGATCATTTAACGCGCATCTTACTTAAAAAAGTATTATCCTTCGCTCAATCT TTTATGACCACGACTCAAAA
Downstream 100 bases:
>100_bases GATAGCGGTTCAGCCAAGGTTCAAGATCCCTCCAGTATGCTTAATTTCTCAGCAATACCTTTGGTTTTGTTTGTCATGGA TGCACGATGAAAGCCAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MKFPVVPVFVLILFTCFASAIWFISSGEKDTRPETWSSFIYTHGYDSGKYKKMDNFDSYEACRDYAKEQSSFYDNVPWEC GLKCGFDSRKQGFQCQEMRNEQ
Sequences:
>Translated_102_residues MKFPVVPVFVLILFTCFASAIWFISSGEKDTRPETWSSFIYTHGYDSGKYKKMDNFDSYEACRDYAKEQSSFYDNVPWEC GLKCGFDSRKQGFQCQEMRNEQ >Mature_102_residues MKFPVVPVFVLILFTCFASAIWFISSGEKDTRPETWSSFIYTHGYDSGKYKKMDNFDSYEACRDYAKEQSSFYDNVPWEC GLKCGFDSRKQGFQCQEMRNEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11995; Mature: 11995
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFPVVPVFVLILFTCFASAIWFISSGEKDTRPETWSSFIYTHGYDSGKYKKMDNFDSYE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHH ACRDYAKEQSSFYDNVPWECGLKCGFDSRKQGFQCQEMRNEQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MKFPVVPVFVLILFTCFASAIWFISSGEKDTRPETWSSFIYTHGYDSGKYKKMDNFDSYE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHH ACRDYAKEQSSFYDNVPWECGLKCGFDSRKQGFQCQEMRNEQ HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA