| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918982
Identifier: 117918982
GI number: 117918982
Start: 620256
End: 622217
Strand: Reverse
Name: 117918982
Synonym: Shewana3_0528
Alternate gene names: NA
Gene position: 622217-620256 (Counterclockwise)
Preceding gene: 117918984
Following gene: 117918975
Centisome position: 12.51
GC content: 48.88
Gene sequence:
>1962_bases ATGAAATACTCTGCCATGATGCTAAGCAGTTTACTGCTCACCAACACTGTCCTCGCTGCAGATATGCGTCCTTTTGAAGG CACGCTGTCCCTCGAGGTGGAAGATTTTCCGGAGCATGCCATTGAAACGTTTCGTCTCCACGGTAAACAAGGCGAGGTAC ATGATTTAGCCTTAGGAGCGACCCCTCGTTGGTTAAAACCCGGTCAAAGCGTCCGTGTGTTTGGCCATGCTAATGGCAAA CAATTGCAGGTGAGTGATAGCAGCGTCAGCTTACTGCAAACCAATGAAACGACTTCTTCGGCTCAAACCGTCAACTCGGC CATAACACCTATCAGTGGCAACAGAAGCGTATTAGTGGCGGAAGTCAACTTTGCGATCAATCCGATCGTAAAACTGACTG AAGCCGAGATCCAAGATCTGTTGTTTAATCAATCTTCGGCCTTCTACGAAGAAAACTCCTATGGCGCAGTTTCCCTCTCG GGCGACACTACCAGCCCAGTTACTGTCGATGTGGATGTCTCTGTATGTAACACAGACGCCGTCGCCTTAGCCGCTGACCA AGAACTCAGTGCCCGTGGCTTTAATCTCAATAATTACGACCATGTTATGTACTTGATCCCGACTCACCCTAAGTGTACTT GGTCTGGTAAGGCCAATGTGGCAGGCAAGCGTAGTTGGATCAAACGAGTACAGTTATCCACGATTAACCATGAATTGGGG CACAACCTTGGCTTATTCCATGCCAATAAAAAGGATTGTGGTGCCGTTACCACAGCTGACAGCAGCCAATGCACTATCAC TGAATATGGCGACTATCTCAGTGCAATGAGTGGTACTAATACACCTAAGCATTTCAATGCATTCCATAAGGAGCAATTAG GTTGGCTGAGTGGCGATCGCATCAAAACCGTCACTGCCGATTCTCGGGTGACCCTATCTCCCGTAGAGGCTGAGGGTAAC TTCCCCCTGCTGTTAAAAATTCCCAATGGCCAAGATTCTTCAGGTAACGAGCTGTTTTACTATGTTGAATATCGCCAGCC AACCGGATTTGATAGCTCACTGGCCACCGAAGCTGCCGCTATGCTCAATGGCGTAAGATTACGTGAAGGCGCTAGCAACA ATGCCGCTAGCAGCTTTTTGCTGGACCCAACACCAAACAGCAGCAGCTATGATTGGGATGACATCAGCTTGGCTCCAGGA CAATCCTTTGAACAGCAAGGTGTCCGTATCGATGTCGTCGCATCAGACTCTTCCTCTGTCACGTTAGATGTAGTCATGCA AAACAGTACTGCTCAGTGTATCCGTGGCACTAGCAGCTTGACGGTACAAGCGGCTGTCTCACAATTGCAACAGGGGCAAC AAGGTTCAGTCGATTTGCTGCTCACCAACAATGACAGTAGCGCCTGCCCAGAAACCACTTACAGCCTGACAACCCAAGCC GATGCGGGTTTATACGCAAACTTAGCAAACAACAGTGTGACACTTGCGCCACAAAGCAATCTGCATCTGACACTGTCGTT AGAAGCGCTGCAAGCAAGCGGTAGCAATACTTGGAAAGTGATTAGCAGCAACCAAACTAGCTCACAGCAAGCGGTGAGTT CAGGTAGCGTACTGTTAACTGCGGCAACCAGTAATACTGCGCCACTCGCTGTGAATGATGATTTCAACGATATCAGCGCG AGCACTGTACTGAATGTGCTGGCCAATGACAGCGATTTAGATGGTGACAGCCTGTTTATCAGTGGCACTACTCAAGGACT GAATGGAAAAGTGACTGTCAACGCTAATAATACCCTGACCTATGTGCCCTCTAAGCGCTTTAAAGGCAGTGATAGCTTTA GCTACACCGTGAGTGATGGCAAACTGACCGCAGTCGCAACTGTCACTATCAGCCCTAGCACCACAAGCGGCGGCACGACG GATACCAGCACAAGTACTGGTGGCAAAGGTAAAAATAGATAA
Upstream 100 bases:
>100_bases CTCAAAAGCTGTTTGCCTTGTTAAATGGAACTTATGTCCCCTAATTGAACGTTAGTGCCCATAAGTTTCACGTTTTGCCC TAAACCTGAAGAGATAAACA
Downstream 100 bases:
>100_bases TATGAGCAAATAAAAAGGGCCGTAATGACGGCCCTTTTTGCTAATACACAACTCAGTTAACTATTCTTGCACGGGTAATG GACACAAGTCGCAGCTCGCG
Product: peptidase M11, gametolysin
Products: NA
Alternate protein names: Outer Membrane Adhesin Like Proteiin; Calx-Beta Domain Family Protein; Hyalin Domain-Containing Protein; RHS Repeat Family; RTX Cytolytic xin Protein A; Fibronectin Type III Domain-Containing Protein; Exported Protein With Lectin-Like C-Terminus; Hemagglutinin/Hemolysin-Related Protein; Copper Amine Oxidase Domain Protein; Lipoprotein
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MKYSAMMLSSLLLTNTVLAADMRPFEGTLSLEVEDFPEHAIETFRLHGKQGEVHDLALGATPRWLKPGQSVRVFGHANGK QLQVSDSSVSLLQTNETTSSAQTVNSAITPISGNRSVLVAEVNFAINPIVKLTEAEIQDLLFNQSSAFYEENSYGAVSLS GDTTSPVTVDVDVSVCNTDAVALAADQELSARGFNLNNYDHVMYLIPTHPKCTWSGKANVAGKRSWIKRVQLSTINHELG HNLGLFHANKKDCGAVTTADSSQCTITEYGDYLSAMSGTNTPKHFNAFHKEQLGWLSGDRIKTVTADSRVTLSPVEAEGN FPLLLKIPNGQDSSGNELFYYVEYRQPTGFDSSLATEAAAMLNGVRLREGASNNAASSFLLDPTPNSSSYDWDDISLAPG QSFEQQGVRIDVVASDSSSVTLDVVMQNSTAQCIRGTSSLTVQAAVSQLQQGQQGSVDLLLTNNDSSACPETTYSLTTQA DAGLYANLANNSVTLAPQSNLHLTLSLEALQASGSNTWKVISSNQTSSQQAVSSGSVLLTAATSNTAPLAVNDDFNDISA STVLNVLANDSDLDGDSLFISGTTQGLNGKVTVNANNTLTYVPSKRFKGSDSFSYTVSDGKLTAVATVTISPSTTSGGTT DTSTSTGGKGKNR
Sequences:
>Translated_653_residues MKYSAMMLSSLLLTNTVLAADMRPFEGTLSLEVEDFPEHAIETFRLHGKQGEVHDLALGATPRWLKPGQSVRVFGHANGK QLQVSDSSVSLLQTNETTSSAQTVNSAITPISGNRSVLVAEVNFAINPIVKLTEAEIQDLLFNQSSAFYEENSYGAVSLS GDTTSPVTVDVDVSVCNTDAVALAADQELSARGFNLNNYDHVMYLIPTHPKCTWSGKANVAGKRSWIKRVQLSTINHELG HNLGLFHANKKDCGAVTTADSSQCTITEYGDYLSAMSGTNTPKHFNAFHKEQLGWLSGDRIKTVTADSRVTLSPVEAEGN FPLLLKIPNGQDSSGNELFYYVEYRQPTGFDSSLATEAAAMLNGVRLREGASNNAASSFLLDPTPNSSSYDWDDISLAPG QSFEQQGVRIDVVASDSSSVTLDVVMQNSTAQCIRGTSSLTVQAAVSQLQQGQQGSVDLLLTNNDSSACPETTYSLTTQA DAGLYANLANNSVTLAPQSNLHLTLSLEALQASGSNTWKVISSNQTSSQQAVSSGSVLLTAATSNTAPLAVNDDFNDISA STVLNVLANDSDLDGDSLFISGTTQGLNGKVTVNANNTLTYVPSKRFKGSDSFSYTVSDGKLTAVATVTISPSTTSGGTT DTSTSTGGKGKNR >Mature_653_residues MKYSAMMLSSLLLTNTVLAADMRPFEGTLSLEVEDFPEHAIETFRLHGKQGEVHDLALGATPRWLKPGQSVRVFGHANGK QLQVSDSSVSLLQTNETTSSAQTVNSAITPISGNRSVLVAEVNFAINPIVKLTEAEIQDLLFNQSSAFYEENSYGAVSLS GDTTSPVTVDVDVSVCNTDAVALAADQELSARGFNLNNYDHVMYLIPTHPKCTWSGKANVAGKRSWIKRVQLSTINHELG HNLGLFHANKKDCGAVTTADSSQCTITEYGDYLSAMSGTNTPKHFNAFHKEQLGWLSGDRIKTVTADSRVTLSPVEAEGN FPLLLKIPNGQDSSGNELFYYVEYRQPTGFDSSLATEAAAMLNGVRLREGASNNAASSFLLDPTPNSSSYDWDDISLAPG QSFEQQGVRIDVVASDSSSVTLDVVMQNSTAQCIRGTSSLTVQAAVSQLQQGQQGSVDLLLTNNDSSACPETTYSLTTQA DAGLYANLANNSVTLAPQSNLHLTLSLEALQASGSNTWKVISSNQTSSQQAVSSGSVLLTAATSNTAPLAVNDDFNDISA STVLNVLANDSDLDGDSLFISGTTQGLNGKVTVNANNTLTYVPSKRFKGSDSFSYTVSDGKLTAVATVTISPSTTSGGTT DTSTSTGGKGKNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69238; Mature: 69238
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSAMMLSSLLLTNTVLAADMRPFEGTLSLEVEDFPEHAIETFRLHGKQGEVHDLALGA CCHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEHHCCHHHHHHEEEECCCCCEEEEEECC TPRWLKPGQSVRVFGHANGKQLQVSDSSVSLLQTNETTSSAQTVNSAITPISGNRSVLVA CCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEE EVNFAINPIVKLTEAEIQDLLFNQSSAFYEENSYGAVSLSGDTTSPVTVDVDVSVCNTDA EECEEECCEEEEHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEECCCE VALAADQELSARGFNLNNYDHVMYLIPTHPKCTWSGKANVAGKRSWIKRVQLSTINHELG EEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHC HNLGLFHANKKDCGAVTTADSSQCTITEYGDYLSAMSGTNTPKHFNAFHKEQLGWLSGDR CCEEEEECCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCE IKTVTADSRVTLSPVEAEGNFPLLLKIPNGQDSSGNELFYYVEYRQPTGFDSSLATEAAA EEEEECCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH MLNGVRLREGASNNAASSFLLDPTPNSSSYDWDDISLAPGQSFEQQGVRIDVVASDSSSV HHCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHCCCEEEEEECCCCCE TLDVVMQNSTAQCIRGTSSLTVQAAVSQLQQGQQGSVDLLLTNNDSSACPETTYSLTTQA EEEEEECCCCHHHHCCCCCEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECC DAGLYANLANNSVTLAPQSNLHLTLSLEALQASGSNTWKVISSNQTSSQQAVSSGSVLLT CCCEEEEECCCEEEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCHHHHHCCCCEEEE AATSNTAPLAVNDDFNDISASTVLNVLANDSDLDGDSLFISGTTQGLNGKVTVNANNTLT EECCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEE YVPSKRFKGSDSFSYTVSDGKLTAVATVTISPSTTSGGTTDTSTSTGGKGKNR ECCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKYSAMMLSSLLLTNTVLAADMRPFEGTLSLEVEDFPEHAIETFRLHGKQGEVHDLALGA CCHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEHHCCHHHHHHEEEECCCCCEEEEEECC TPRWLKPGQSVRVFGHANGKQLQVSDSSVSLLQTNETTSSAQTVNSAITPISGNRSVLVA CCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEE EVNFAINPIVKLTEAEIQDLLFNQSSAFYEENSYGAVSLSGDTTSPVTVDVDVSVCNTDA EECEEECCEEEEHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEECCCE VALAADQELSARGFNLNNYDHVMYLIPTHPKCTWSGKANVAGKRSWIKRVQLSTINHELG EEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHC HNLGLFHANKKDCGAVTTADSSQCTITEYGDYLSAMSGTNTPKHFNAFHKEQLGWLSGDR CCEEEEECCCCCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCE IKTVTADSRVTLSPVEAEGNFPLLLKIPNGQDSSGNELFYYVEYRQPTGFDSSLATEAAA EEEEECCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH MLNGVRLREGASNNAASSFLLDPTPNSSSYDWDDISLAPGQSFEQQGVRIDVVASDSSSV HHCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHCCCEEEEEECCCCCE TLDVVMQNSTAQCIRGTSSLTVQAAVSQLQQGQQGSVDLLLTNNDSSACPETTYSLTTQA EEEEEECCCCHHHHCCCCCEEHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECC DAGLYANLANNSVTLAPQSNLHLTLSLEALQASGSNTWKVISSNQTSSQQAVSSGSVLLT CCCEEEEECCCEEEEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCHHHHHCCCCEEEE AATSNTAPLAVNDDFNDISASTVLNVLANDSDLDGDSLFISGTTQGLNGKVTVNANNTLT EECCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEE YVPSKRFKGSDSFSYTVSDGKLTAVATVTISPSTTSGGTTDTSTSTGGKGKNR ECCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA