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The map label for this gene is cyaY [H]

Identifier: 117918845

GI number: 117918845

Start: 450091

End: 450420

Strand: Reverse

Name: cyaY [H]

Synonym: Shewana3_0388

Alternate gene names: 117918845

Gene position: 450420-450091 (Counterclockwise)

Preceding gene: 117918853

Following gene: 117918843

Centisome position: 9.06

GC content: 46.67

Gene sequence:

>330_bases
ATGGCCATGACAGATACAGAATTTCACCAGCTCGCCGATGACATGTTCCAAGCGATAGAGACCGCTATCGAAACCGCAAT
TGATGAACAAGACGCCGATGTCGATATTGATGCCAGCGGTAACGTGTTACAGCTGGAATTTGTAGATGGTTCGAAAATTG
TCATCAACAAACAAGAGCCTTTGCATGAGATTTGGGTTGCGACCCGTTTCGGTGGCTATCACTTTGGTTTTGTTGATGGT
AAATGGATTGATGGTCGTAATGGCGGCGAGTTTATGCCCTTTGTACAGGACTCCATCCTTCGCCAAAGCGGTATCGCACT
GAGCTTCTAA

Upstream 100 bases:

>100_bases
TAACAATAAAAACAGTCTCATTTTTCTCAACATCTGTGCATCTGGTGACTAATAGCCTTATAATCGCACCCATCTTGACG
AAAGCAAAGGACAGAAATGC

Downstream 100 bases:

>100_bases
TAAGCGCGTGCAGCATTGCTAAGCGGGAGCAACTCCCGCTTAAAACTCCACGTTAGCGTTATTGATATCGACCCCAAAGG
GCATCACCGTTAGCTCGCCC

Product: frataxin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MAMTDTEFHQLADDMFQAIETAIETAIDEQDADVDIDASGNVLQLEFVDGSKIVINKQEPLHEIWVATRFGGYHFGFVDG
KWIDGRNGGEFMPFVQDSILRQSGIALSF

Sequences:

>Translated_109_residues
MAMTDTEFHQLADDMFQAIETAIETAIDEQDADVDIDASGNVLQLEFVDGSKIVINKQEPLHEIWVATRFGGYHFGFVDG
KWIDGRNGGEFMPFVQDSILRQSGIALSF
>Mature_108_residues
AMTDTEFHQLADDMFQAIETAIETAIDEQDADVDIDASGNVLQLEFVDGSKIVINKQEPLHEIWVATRFGGYHFGFVDGK
WIDGRNGGEFMPFVQDSILRQSGIALSF

Specific function: Not Known; Its Knock Out Does Not Affect Cellular Iron Content. [C]

COG id: COG1965

COG function: function code P; Protein implicated in iron transport, frataxin homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frataxin family [H]

Homologues:

Organism=Escherichia coli, GI1790239, Length=107, Percent_Identity=42.0560747663551, Blast_Score=90, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002908
- InterPro:   IPR020895 [H]

Pfam domain/function: PF01491 Frataxin_Cyay [H]

EC number: NA

Molecular weight: Translated: 12171; Mature: 12039

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: PS01344 FRATAXIN_1 ; PS50810 FRATAXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMTDTEFHQLADDMFQAIETAIETAIDEQDADVDIDASGNVLQLEFVDGSKIVINKQEP
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCCEEEEECCCC
LHEIWVATRFGGYHFGFVDGKWIDGRNGGEFMPFVQDSILRQSGIALSF
HHHHHEECCCCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHCCCEECC
>Mature Secondary Structure 
AMTDTEFHQLADDMFQAIETAIETAIDEQDADVDIDASGNVLQLEFVDGSKIVINKQEP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCCEEEEECCCC
LHEIWVATRFGGYHFGFVDGKWIDGRNGGEFMPFVQDSILRQSGIALSF
HHHHHEECCCCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA